Cladistic analysis of the subfamilies within the Tubificidae (Oligochaeta)

A hypothesis of phylogenetic relationships within the family Tubificidae is presented, based on a Wagner analysis of morphological characters in the different subfamilies. Two major lincages are recognized. One, including the subfamilies Tubificinae, Telmatodrilinae and Limnodriloidinae, is supported by a synapomorphic ability to form slender spermatozeugmata in the spermathecae; the other, including Rhyacodrilinae (paraphyletic), Phallodrilinae, and the (present family) Naididae, is supported by two synapomorphics, the possession of modified penial setae and numerous coelomocytes (the latter secondarily lost in the Phallodrilinae). Some implications for the classification of the Tubificidae are discussed.     

Taxonomic Studies of Phallodrilinae (Oligochaeta, Tubificidae) from the Great Barrier Reef and the Comoro Islands with Descriptions of Ten New Species and One New Genus

A taxonomic and morphological account of a collection of Phallodrilinae from coralline sands at Heron Island in Australia's Great Barrier Reef is given. Ten new forms are described: Jamiesoniella athecata gen. et sp.n. Phallodrilus rectisetosus heronensis subsp.n. P. geniculatus sp.n. P. filithecatus sp.n. P. clavatus sp.n. (latter three all devoid of an alimentary canal), Bathydrilus superiovasatus sp.n. Coralliodrilus atriobifidus sp.n. C. oviatriatus sp.n. C. parvigenitalis sp.n. and the gutless C. avisceralis sp.n. Morphological notes are given for Phallodrilus albidus Jamieson, 1977 and Bathydrilus rohdei (Jamieson, 1977). The new meiobenthic genus Jamiesoniella is characterized by having simple atria with only one pair of prostate glands, which are attached to ectal parts of atria, and by lacking spermathecae and penial setae, The genus is probably related to Aktedrilus Knöllner and Bacescuella Hrabě. A gutless species, Phallodrilus comorensis sp.n. is described from the Comoro Islands in the Mozambique Channel (W Indian Ocean).     

The Effect of a Quaternary Amine (Aliquat 336) on Growth and Photosynthesis of the Green Alga Chlorella emersonii, and the Effect on Photosynthesis in Isolated Spinach Chloroplasts

A quaternary amine, Aliquat 336, inhibits the growth of the green alga Chlorella emersonii, ¹⁴C-fixation of the alga is also inhibited. The effect and the site of action of the compound was studied by using isolated spinach chloroplasts. The carbon dioxide dependent oxygen evolution of the chloroplasts is inhibited directly upon the addition of the amine and the oxygen evolution is replaced by an oxygen uptake. By investigating some electron transport reactions in the chloroplasts we were able to show that Aliquat 336 affects the electron transport on the level of photophosphorylation. The results from the in vivo and the in vitro experiments thus show that the quaternary amine affects the photosynthetic process. Aliquat 336 is a solvent extractant used in several industrial processes for extraction of metals from aqueous solutions. Aliquat 336 could be considered a presumptive water pollutant as the compound could enter a recipient water body and thus affect photosynthesis.     

Taxonomic Studies on the Marine Genera Aktedrilus Knöllner and Bacescuella Hrabe' (Oligochaeta, Tubificidae), with Descriptions of Seven New Species

The taxonomy and morphology of Aktedrilus Knöllner, 1935 and Bacescuella Hrabe' 1973 (subfamily Phallodrilinae), both common genera of the marine, littoral meiofauna, were studied on the basis of material from various geographical areas. A. monospermathecus Knöllner, 1935 is redescribed from France and Scotland. A. magnus sp.n., A. hrevis sp.n., A. curvipenis sp.n. and A. floridensis sp.n. are described from Italy, Brazil, France and Florida, respectively. Two very closely related forms are described from the Pacific: A. locyi sp.n. (California) and A. parviprostatus sp.n. (Great Barrier Reef). B. mediterranea sp.n. is described from Italy, and new European records are given forB. arclica Erséus, 1978 andfi. parvithecata Erséus, 1978. Both genera are characterized by having two pairs of prostate glands, well developed penes, and unpaired, mid-dorsal spermatheca (if present). The species of Bacescuella transfer their sperm by means of external spermatophores, structures that are not developed in Aktedrilus. The eight species of Aktedrilus are largely distinguished by means of the morphology of the spermatheca, penes and prostates. The four species of Bacescuella differ principally from each other in the length of the vasa deferentia, and in the morphology of the prostates and copulatory organs. Most Bacescuella species lack spermatheca.     

Co‐evolutionary analysis implies auxiliary functions of HSP110 in Plasmodium falciparum

Plasmodium falciparum encounters frequent environmental challenges during its life cycle which makes productive protein folding immensely challenging for its metastable proteome. To identify the important components of protein folding machinery involved in maintaining P. falciparum proteome, we performed a proteome‐wide phylogenetic profiling across various species. We found that except HSP110, the parasite lost all other cytosolic nucleotide exchange factors essential for regulating HSP70 which is the centrum of the protein folding network. Evolutionary and structural analysis shows that besides its canonical interaction with HSP70, PfHSP110 has acquired sequence insertions for additional dynamic interactions. Molecular co‐evolution profile depicts that the co‐evolving proteins of PfHSP110 belong to distinct pathways like genetic variation, DNA repair, fatty acid biosynthesis, protein modification/trafficking, molecular motions, and apoptosis. These proteins exhibit unique physiochemical properties like large size, high iso‐electric point, low solubility, and antigenicity, hence require PfHSP110 chaperoning to attain functional state. Co‐evolving protein interaction network suggests that PfHSP110 serves as an important hub to coordinate protein quality control, survival, and immune evasion pathways in the parasite. Overall, our findings highlight potential accessory roles of PfHSP110 that may provide survival advantage to the parasite during its lifecycle and febrile conditions. The data also open avenues for experimental validation of auxiliary functions of PfHSP110 and their exploration for design of better antimalarial strategies. Proteins 2015; 83:1513–1525. © 2015 Wiley Periodicals, Inc.     

Autoregulation of regulatory proteins is key for dynamic operation of GAL switch in Saccharomyces cerevisiae

Autoregulation and nucleocytoplasmic shuttling play important roles in the operation of the GAL regulatory system. However, the significance of these mechanisms in the overall operation of the switch is unclear. In this work, we develop a dynamic model for the GAL system and further validate the same using steady-state and dynamic experimental expression data. Next, the model is used to delineate the relevance of shuttling and autoregulation in response to inducing, repressing, and non-inducing-non-repressing media. The analysis indicates that autoregulation of the repressor, Gal80p, is key in obtaining three distinct steady states in response to the three media. In particular, the analysis rationalizes the intuitively paradoxical observation that the concentration of repressor, Gal80p, actually increases in response to an increase in the inducer concentration. On the other hand, although nucleocytoplasmic shuttling does not affect the dynamics of the system, it plays a dominant role in obtaining a sensitive response to galactose. The dynamic model was also used to obtain insights on the preculturing effect on the system behavior.     

Protective effect of Ocimum sanctum L after high-dose 131iodine exposure in mice: an in vivo study

Radioprotective effect of aqueous extract of Ocimum sanctum (40 mg/kg body weight, for 15 days) in mice exposed to high-doses (3.7 MBq) of oral 131iodine was investigated by studying the organ weights, lipid peroxidation and antioxidant defense enzymes in various target organs like liver, kidneys, salivary glands and stomach at 24 hr after exposure in adult Swiss mice. The mean weight of the salivary glands showed significant increase after 131iodine administration. 131iodine exposure significantly increased lipid peroxidation in kidneys and salivary glands in comparison to control animals. Pretreatment with O. sanctum in radioiodine exposed group showed significant reduction in lipid peroxidation in both kidneys and salivary glands. In liver, reduced glutathione (GSH) levels showed significant reduction after radioiodine exposure while pretreatment with O. sanctum exhibited less depletion in GSH level even after 131iodine exposure. However, no such changes were observed in stomach. The results indicate the possibility of using aqueous extract of O. sanctum for ameliorating 131Iodine induced damage to the salivary glands.     

Clastogenic and mutagenic effects of bisphenol A: an endocrine disruptor

Bisphenol A (BPA) is a well-known endocrine disruptor (ED) which represents a major toxicological and public health concern due to its widespread exposure to humans. BPA has been reported to induce DNA adduct and aneuploidy in rodents. Recent studies in humans depicted its association with recurrent miscarriages and male infertility due to sperm DNA damage indicating that BPA might have genotoxic activity. Hence, the present study was designed to determine genotoxic and mutagenic effects of BPA using in-vivo and in-vitro assays. The adult male and female rats were orally administered with various doses of BPA (2.4 μg, 10 μg, 5mg and 50mg/kgbw) once a day for six consecutive days. Animals were sacrificed, bone marrow and blood samples were collected and subjected to series of genotoxicity assay such as micronucleus, chromosome aberration and single cell gel electrophoresis (SCGE) assay respectively. Mutagenicity was determined using tester strains of Salmonella typhimurium (TA 98, TA 100 and TA 102) in the presence and absence of metabolically active microsomal fractions (S9). Further, we estimated the levels of 8-hydroxydeoxyguanosine, lipid per-oxidation and glutathione activity to decipher the potential genotoxic mechanism of BPA. We observed that BPA exposure caused a significant increase in the frequency of micronucleus (MN) in polychromatic erythrocytes (PCEs), structural chromosome aberrations in bone marrow cells and DNA damage in blood lymphocytes. These effects were observed at various doses tested except 2.4 μg compared to vehicle control. We did not observe the mutagenic response in any of the tester strains tested at different concentrations of BPA. We found an increase in the level of 8-hydroxydeoxyguanosine in the plasma and increase in lipid per-oxidation and decrease in glutathione activity in liver of rats respectively which were exposed to BPA. In conclusion, the data obtained clearly documents that BPA is not mutagenic but exhibit genotoxic activity and oxidative stress could be one of the mechanisms leading to genetic toxicity.     

Oxygen Evolution and Oxygen Uptake by Isolated Chloroplasts of Wheat Irradiated with Monochromatic Light, without the Addition of an Oxidant

The oxygen exchange obtained when isolated chloroplasts of wheat are irradiated, without the addition of a Hill oxidant, has been investigated. Depending on the wavelength, two types of oxygen exchange are obtained. In light absorbed by both photosystems an oxygen gush appears directly upon irradiation. This oxygen evolving reaction is soon replaced by an oxygen uptake which is present until the end of the irradiation period. In light absorbed mainly in photosystem I, no oxygen gush can be observed, instead an oxygen uptake appears directly upon irradiation. An oxygen evolving process can also be observed in irradiations performed with photo-system I light, but this process appears after 10–15 seconds of irradiation. The influence of various external factors on the oxygen gush and the oxygen uptake, e.g. different wavelengths, light intensity, length of the dark periods between irradiations, was studied. The results show that the oxygen evolving reaction appearing upon irradiation with light absorbed by photosystem II and I, reflect the reduction of an oxidant, probably plasto-quinone, in the electron transport chain between the two photosystems. The reoxidation of this oxidant can be brought about after irradiating with light absorbed in photosystem I, or by prolonging the dark period between irradiations, or through some unknown process connected to photosystem II. The oxygen uptake which consists of two components, one appearing directly upon irradiation and the other one appearing after about 10 seconds of irradiation, confirms earlier observations that oxygen can be reduced in photosystem I. The electrons for the oxygen uptake appearing directly upon irradiation, are obtained from the reduced intermediates in the electron transport chain between the two photosystems. The electrons for the other oxygen uptake process are obtained from a reductant in the chloroplasts with access to the carrier chain between the photosystems. Whether the two oxygen uptake reactions reflect two sites of interaction of oxygen with the electron transport chain or only one site is discussed.