Directed evolution of an endoinulinase from Talaromyces purpureogenus toward efficient production of inulooligosaccharides

Inulinases are fructofuranosyl hydrolases that target the β‐2,1 linkage of inulin and hydrolyze it into fructose, glucose and inulooligosaccharides (IOS), the latter are of growing interest as dietary fibers. Inulinases from various microorganisms have been purified, characterized and produced for industrial applications. However, there remains a need for inulinases with increased catalytic activity and better production yields to improve the hydrolysis process and fulfill the growing industrial demands for specific fibers. In this study, we used directed enzyme evolution to increase the yield and activity of an endoinulinase enzyme originated from the filamentous fungus Talaromyces purpureogenus (Penicillium purpureogenum ATCC4713). Our directed evolution approach yielded variants showing up to fivefold improvements in soluble enzyme production compared to the starting point which enabled high‐yield production of highly purified recombinant enzyme. The distribution of the enzymatic reaction products demonstrated that after 24 h of incubation, the main product (57%) had a degree of polymerization of 3 (DP3). To the best of our knowledge, this is the first application of directed enzyme evolution to improve inulooligosaccharide production. The approach enabled the screening of large genetic libraries within short time frames and facilitated screening for improved enzymatic activities and properties, such as substrate specificity, product range, thermostability and pH optimum. © 2018 American Institute of Chemical Engineers Biotechnol. Prog., 34:868–877, 2018     

Effects of stabilizing solutes on salt activation of phosphoenolpyruvate carboxylase from various plant sources

Phosphoenolpyruvate carboxylase (PEP carboxylase EC 4.1.1.31) was extracted from various halophytic, semi-halophytic and glycophytic plant species. When the enzyme of those extracts was substrate protected, and in the presence of 1.6 m M PEP in the reaction mixture, the activity of PEP carboxylase was increased by 100 m M NaCl, and the activity range in the presence of NaCl was expanded. No correlation could be established between the response of the enzyme to ions and various plant characteristics, such as taxonomic status, salt tolerance or carbon fixation pathways. Salt activation of PEP carboxylase was substrate (PEP) dependent, but the minimal substrate concentration varied in different species.
Effects of the stabilizing solutes PEP, betaine, proline and glycerol on the kinetic properties of PEP carboxylase from Zea mays (L.) cv. Hazera were analyzed. In the absence of NaCl the slope of the Hill plot (n_It) tended to rise in the presence of these solutes. Stabilization of the enzyme with betaine or glycerol caused a decrease in K'. while K' and VTO increased in the presence of PEP. NaCl (100 mM) caused an increase in both K' and V^max in the protected as well as in the unprotected enzyme, except for PEP protection, where K' decreased somewhat. In the presence of the protectants, glycerol and PEP, the effect of NaCl on V^max, was 2–4 times higher than its effect on the non-protected enzyme.     

Effects of salinity,N-nutrition and humidity on photosynthesis and protein metabolism ofChloris gayana Kunth

Summary Under high atmospheric humidity, Rhodes grass plants responded favourably to an increase in nitrate fertilization. Under low atmospheric humidity an optimum point was reached at lower N-treatment.Plants' growth was improved by a salinity treatment of up to 100 mM, at high atmospheric humidity. A higher salt concentration cancelled the favourable effect of added nitrate.The rise in yield which follows salt or nitrate treatments is apparently combined with an increase in activity of the key photosynthetic enzymes, Phosphoenol pyruvate carboxylase and Ribulose biphosphate carboxylase. A similar rise in activity is seen in nitrate reductase, a key enzyme in nitrogen metabolism. Evidently, all three enzymatic systems are not damaged in high salt treatments, and the potential photosynthetic capacity remained practically uneffected in all treatments. As no correlation could be found between transpiration and growth curves, it is assumed that the supply of CO₂ is also unhampered. Thus, the major negative effect of salinity, seems to be on protein synthesis, which eventually leads to disturbed growth.Agricultural Research Organization. The Volcanic Center.     

Effects of NaCl on the properties of phosphoenolpyruvate carboxylase from Suaeda monoica and Chloris gayana

The effects of NaCl on the kinetic properties of desalted phosphoenolpyruvate carboxylase (PEP carboxylase, EC 4.1.1.31) from two halophytes, Suaeda monoica Forssk. ex. J.F. Gmel and Chloris gayana Kunth. were investigated. The tolerance of PEP carboxylase to NaCl in the reaction medium depends on the enzyme pre-conditioning as well as on the concentration of its substrate PEP in the assay medium. Addition of PEP to the extraction and the storage medium, stabilizes the enzyme. Such a pre-treated enzyme is inhibited by NaCl in the presence of low concentrations of PEP in the assay medium but is activated by NaCl in the presence of PEP at concentrations above 1.0 m M . NaCl modifies the n_H value, K' and V_max, and seems to act as an allosteric effector.     

Photosynthetic carbon fixation in the corollas of Petunia hybrida

Corollas of Petunia hybrida (cv. Hit Parade Rosa) flowers fixed ¹⁴CO₂ under both light and dark conditions. Rates of light fixation were much higher in mature pink corollas than in young, green corollas [57 and 9 nmol (ngchl)¹ min^-1], paralleling the development of chloroplasts in these tissues. Stomatal conductance in corollas was only 12% of that in green leaves, mainly due to the presence of few, and non-functioning stomata in the corolla. The activity and concentration of ribulose bisphosphate carboxylase (EC 4.1.1.39) in corolla extracts were only about 30% (per unit Chi) of those in extracts from green leaves. These results, together with previous results, might indicate a coordinated reduction in activity of systems participating in photosynthesis in corollas. The fixation products following a 6 s pulse with ¹⁴CO₂, were typical of C, plants in both corollas and green leaves, but a higher level of β-carboxylation products was found in the corollas. The activity of phosphoenol-pyruvate carboxylase (EC 4.1.1.31) (per unit protein) was similar in both tissues. Although the total carbon fixed by the corolla constituted only a small part of the metabolites required for flower development, certain photosynthetic metabolites might have a regulatory role in flower development.     

Root surface phosphatase activity in ecotypes of Aegilops peregrina

The relationships between root surface phosphatase activity and the edaphic factors of their native habitats were investigated in four ecotypes of Aegilops peregrina (Hack.) Maire et Weil. In one set of experiments plants were grown in phosphate-deficient nutrient solution cultures (5 μ M ) with three pH values: 5.5, 6.5 and 7.5. In a second series, plants were grown in both P-poor and P-rich soils.
Results showed an optimal activity of the commonly-described root surface acid phosphatase of pH 4.5–5.0 in the ecotypes Meron (a P-poor montmorillonitic, typical mediterranean Terra-Rossa soil) and Har-Hurshan (a P-rich calcareous soil). However, in the ecotypes Malkiya (a P-rich kaolinitic Terra-Rossa) and Bet-Guvrin (a P-rich calcareous soil) the optimal activity of the phosphatase occurred at pH 6.0. The pH level of the growth solution had no effect on the pH of optimal activity of the phosphatase in the ecotypes Malkiya and Bet-Guvrin, but it somewhat affected their level of activity.
Phosphatase activity was stimulated when plant roots were grown in a P-poor soil, as compared to the activity of those which were grown in a P-rich soil. Plants of the Malkiya ecotype exhibited the strongest activation of phosphatase as compared to the other three ecotypes. It seems that ecotypes which have evolved in P-rich soils may regulate their root surface phosphatase activity better than those which have evolved in P-poor soils.