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1.
Alexander Schnitzler Birgitte Brinkmann Olsen Olaf-Georg Issinger Karsten Niefind 《Journal of molecular biology》2014
Eukaryotic protein kinases are typically strictly controlled by second messenger binding, protein/protein interactions, dephosphorylations or similar processes. None of these regulatory mechanisms is known to work for protein kinase CK2 (former name “casein kinase 2”), an acidophilic and constitutively active eukaryotic protein kinase. CK2 predominantly exists as a heterotetrameric holoenzyme composed of two catalytic subunits (CK2α) complexed to a dimer of non-catalytic subunits (CK2β). One model of CK2 regulation was proposed several times independently by theoretical docking of the first CK2 holoenzyme structure. According to this model, the CK2 holoenzyme forms autoinhibitory aggregates correlated with trans-autophosphorylation and driven by the down-regulatory affinity between an acidic loop of CK2β and the positively charged substrate binding region of CK2α from a neighboring CK2 heterotetramer. Circular trimeric aggregates in which one-half of the CK2α chains show the predicted inhibitory proximity between those regions were detected within the crystal packing of the human CK2 holoenzyme. Here, we present further in vitro support of the “regulation-by-aggregation” model by an alternative crystal form in which CK2 tetramers are arranged as approximately linear aggregates coinciding essentially with the early predictions. In this assembly, the substrate binding region of every CK2α chain is blocked by a CK2β acidic loop from a neighboring tetramer. We found these crystals with CK2Andante that contains a CK2β variant mutated in a CK2α-contact helix and described to be responsible for a prolonged circadian rhythm in Drosophila. The increased propensity of CK2Andante to form aggregates with completely blocked active sites may contribute to this phenotype. 相似文献
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Atypical surface behavior of ceramides with nonhydroxy and 2-hydroxy very long-chain (C28–C32) PUFAs
Daniel A. Peñalva Gerardo M. Oresti Fernando Dupuy Silvia S. Antollini Bruno Maggio Marta I. Aveldaño María L. Fanani 《生物化学与生物物理学报:生物膜》2014
Unique species of ceramide (Cer) with very-long-chain polyunsaturated fatty acid (VLCPUFA), mainly 28–32 carbon atoms, 4–5 double bonds, in nonhydroxy and 2-hydroxy forms (n-V Cer and h-V Cer, respectively), are generated in rat spermatozoa from the corresponding sphingomyelins during the acrosomal reaction. The aim of this study was to determine the properties of these sperm-distinctive ceramides in Langmuir monolayers. Individual Cer species were isolated by HPLC and subjected to analysis of surface pressure, surface potential, and Brewster angle microscopy (BAM) as a function of molecular packing. In comparison with known species of Cer, n-V Cer and h-V Cer species showed much larger mean molecular areas and increased molecular dipole moments in liquid expanded phases, which suggest bending and partial hydration of the double bonded portion of the VLCPUFA. The presence of the 2-hydoxyl group induced a closer molecular packing in h-V Cer than in their chain-matched n-V Cer. In addition, all these Cer species showed liquid-expanded to liquid-condensed transitions at room temperature. Existence of domain segregation was confirmed by BAM. Additionally, thermodynamic analysis suggests a phase transition close to the physiological temperature for VLCPUFA-Cers if organized as bulk dispersions. 相似文献
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Lohans Pedrera Maria Laura Fanani Uris Ros María E. Lanio Bruno Maggio Carlos Álvarez 《生物化学与生物物理学报:生物膜》2014
Sticholysin I (St I) is a pore-forming toxin (PFT) produced by the Caribbean Sea anemone Stichodactyla helianthus belonging to the actinoporin protein family, a unique class of eukaryotic PFT exclusively found in sea anemones. As for actinoporins, it has been proposed that the presence of sphingomyelin (SM) and the coexistence of lipid phases increase binding to the target membrane. However, little is known about the role of membrane structure and dynamics (phase state, fluidity, presence of lipid domains) on actinoporins' activity or which regions of the membrane are the most favorable platforms for protein insertion. To gain insight into the role of SM on the interaction of St I to lipid membranes we studied their binding to monolayers of phosphatidylcholine (PC) and SM in different proportions. Additionally, the effect of acyl chain length and unsaturation, two features related to membrane fluidity, was evaluated on St I binding to monolayers. This study revealed that St I binds and penetrates preferentially and with a faster kinetic to liquid-expanded films with high lateral mobility and moderately enriched in SM. A high content of SM induces a lower lateral diffusion and/or liquid-condensed phases, which hinder St I binding and penetration to the lipid monolayer. Furthermore, the presence of lipid domain borders does not appear as an important factor for St I binding to the lipid monolayer. 相似文献
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谭燕 《中国微生态学杂志》2015,27(4):424-428
目的探讨中枢神经系统感染患者脑脊液和血清中MMP-2(基质金属蛋白2)、MMP-9(基质金属蛋白9)、MCP-1(单核细胞趋化蛋白-1)表达的意义。方法选取2012年12月至2014年5月我院收治的中枢神经系统感染患者60例,其中结核性脑膜炎组(TBM组)、化脓性脑膜炎组(PM组)、真菌性脑膜炎组(CM组)和病毒性脑膜炎组(VM组)各15例;另外选取同期健康体检者15例作为对照组。治疗前、治疗后检测5组患者脑脊液常规及生化,采用ELISA法检测其脑脊液及血清中MMP-2、MMP-9、MCP-1的表达,并对患者进行格拉斯哥昏迷评分(GCS),分析其内在联系。结果治疗前、治疗后TBM组、PM组、CM组和VM组的脑脊液细胞数、蛋白水平均高于对照组,且TBM组、PM组的脑脊液细胞数、蛋白水平均高于CM组和VM组(P0.05);治疗前、治疗后TBM组、PM组、CM组和VM组的脑脊液糖水平、GCS评分低于对照组,治疗前TBM组、PM组、CM组、VM组的脑脊液氯化物水平低于对照组(P0.05);治疗后四组与对照组在脑脊液氯化物水平以及GCS评分等方面的差异无统计学意义(P0.05);治疗前、治疗后TBM组、PM组、CM组、VM组的脑脊液和血清中MMP-2、MMP-9、MCP-1水平均显著高于对照组,且治疗前TBM组、PM组的脑脊液和血清中MMP-2、MMP-9、MCP-1水平均显著高于CM组、VM组以及对照组(P0.05);治疗后PM组、CM组、VM组的脑脊液和血清中MMP-2、MMP-9、MCP-1水平的差异无统计学意义(P0.05);经Pearson进行相关性分析,BM组、PM组、CM组以及VM组的脑脊液和血清中MMP-2、MMP-9、MCP-1表达均与GCS评分负相关(相关系数r=-0.859~-0.574,P0.05)。结论中枢神经系统感染患者脑脊液和血清中MMP-2、MMP-9、MCP-1表达均与GCS评分相关,动态检测脑脊液和血清中MMP-2、MMP-9、MCP-1表达均对中枢神经系统感染的诊断和判断预后有积极意义。 相似文献
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The discovery and application of the CRISPR/Cas9 genome editing method has greatly enhanced the ease with which transgenic manipulation can occur. We applied this technology to the mollusc, Crepidula fornicata, and have successfully created transgenic embryos expressing mCherry fused to endogenous β‐catenin. Specific integration of the fluorescent reporter was achieved by homologous recombination with a β‐catenin‐specific donor DNA containing the mCherry coding sequence. This fluorescent gene knock‐in strategy permits in vivo observations of β‐catenin expression during embryonic development and represents the first demonstration of CRISPR/Cas9‐mediated transgenesis in the Lophotrochozoa superphylum. The CRISPR/Cas9 method is a powerful and economical tool for genome modification and presents an option for analysis of gene expression in not only major model systems, but also in those more diverse species that may not have been amenable to the classic methods of transgenesis. This approach will allow one to generate transgenic lines of snails for future studies. genesis 53:237–244, 2015. © 2014 Wiley Periodicals, Inc. 相似文献
8.
Is it getting hot in here? Adjustment of hydraulic parameters in six boreal and temperate tree species after 5 years of warming 下载免费PDF全文
Katherine A. McCulloh Joshua Petitmermet Artur Stefanski Karen E. Rice Roy L. Rich Rebecca A. Montgomery Peter B. Reich 《Global Change Biology》2016,22(12):4124-4133
Global temperatures (T) are rising, and for many plant species, their physiological response to this change has not been well characterized. In particular, how hydraulic parameters may change has only been examined experimentally for a few species. To address this, we measured characteristics of the hydraulic architecture of six species growing in ambient T and ambient +3.4 °C T plots in two experimentally warmed forest sites in Minnesota. These sites are at the temperate–boreal ecotone, and we measured three species from each forest type. We hypothesized that relative to boreal species, temperate species near their northern range border would increase xylem conduit diameters when grown under elevated T. We also predicted a continuum of responses among wood types, with conduit diameter increases correlating with increases in the complexity of wood structure. Finally, we predicted that increases in conduit diameter and specific hydraulic conductivity would positively affect photosynthetic rates and growth. Our results generally supported our hypotheses, and conduit diameter increased under elevated T across all species, although this pattern was driven predominantly by three species. Two of these species were temperate angiosperms, but one was a boreal conifer, contrary to predictions. We observed positive relationships between the change in specific hydraulic conductivity and both photosynthetic rate (P = 0.080) and growth (P = 0.012). Our results indicate that species differ in their ability to adjust hydraulically to increases in T. Specifically, species with more complex xylem anatomy, particularly those individuals growing near the cooler edge of their range, appeared to be better able to increase conduit diameters and specific hydraulic conductivity, which permitted increases in photosynthesis and growth. Our data support results that indicate individual's ability to physiologically adjust is related to their location within their species range, and highlight that some wood types may adjust more easily than others. 相似文献
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Aquatic organisms such as cichlids, coelacanths, seals, and cetaceans are active in UV–blue color environments, but many of them mysteriously lost their abilities to detect these colors. The loss of these functions is a consequence of the pseudogenization of their short wavelength-sensitive (SWS1) opsin genes without gene duplication. We show that the SWS1 gene (BdenS1ψ) of the deep-sea fish, pearleye (Benthalbella dentata), became a pseudogene in a similar fashion about 130 million years ago (Mya) yet it is still transcribed. The rates of nucleotide substitution (~ 1.4 × 10− 9/site/year) of the pseudogenes of these aquatic species as well as some prosimian and bat species are much smaller than the previous estimates for the globin and immunoglobulin pseudogenes. 相似文献