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1.
András Szilágyi István Scheuring David P. Edwards Jerome Orivel Douglas W. Yu 《Ecology letters》2009,12(12):1306-1316
Theory suggests that spatial structuring should select for intermediate levels of virulence in parasites, but empirical tests are rare and have never been conducted with castration (sterilizing) parasites. To test this theory in a natural landscape, we construct a spatially explicit model of the symbiosis between the ant-plant Cordia nodosa and its two, protecting ant symbionts, Allomerus and Azteca . Allomerus is also a castration parasite, preventing fruiting to increase colony fecundity. Limiting the dispersal of Allomerus and host plant selects for intermediate castration virulence. Increasing the frequency of the mutualist, Azteca , selects for higher castration virulence in Allomerus , because seeds from Azteca -inhabited plants are a public good that Allomerus exploits. These results are consistent with field observations and, to our knowledge, provide the first empirical evidence supporting the hypothesis that spatial structure can reduce castration virulence and the first such evidence in a natural landscape for either mortality or castration virulence. 相似文献
2.
An evaluation of semi‐automated methods for collecting ecosystem‐level data in temperate marine systems 下载免费PDF全文
Kingsley J. Griffin Luke H. Hedge Manuel González‐Rivero Ove I. Hoegh‐Guldberg Emma L. Johnston 《Ecology and evolution》2017,7(13):4640-4650
Historically, marine ecologists have lacked efficient tools that are capable of capturing detailed species distribution data over large areas. Emerging technologies such as high‐resolution imaging and associated machine‐learning image‐scoring software are providing new tools to map species over large areas in the ocean. Here, we combine a novel diver propulsion vehicle (DPV) imaging system with free‐to‐use machine‐learning software to semi‐automatically generate dense and widespread abundance records of a habitat‐forming algae over ~5,000 m2 of temperate reef. We employ replicable spatial techniques to test the effectiveness of traditional diver‐based sampling, and better understand the distribution and spatial arrangement of one key algal species. We found that the effectiveness of a traditional survey depended on the level of spatial structuring, and generally 10–20 transects (50 × 1 m) were required to obtain reliable results. This represents 2–20 times greater replication than have been collected in previous studies. Furthermore, we demonstrate the usefulness of fine‐resolution distribution modeling for understanding patterns in canopy algae cover at multiple spatial scales, and discuss applications to other marine habitats. Our analyses demonstrate that semi‐automated methods of data gathering and processing provide more accurate results than traditional methods for describing habitat structure at seascape scales, and therefore represent vastly improved techniques for understanding and managing marine seascapes. 相似文献
3.
Ji Guo Su Xiao Ming Han Xiao Zhang Yan Xue Hou Jian Zhuo Zhu Yi Dong Wu 《Journal of biomolecular structure & dynamics》2016,34(3):560-571
Protein collective motions play a critical role in many biochemical processes. How to predict the functional motions and the related key residue interactions in proteins is important for our understanding in the mechanism of the biochemical processes. Normal mode analysis (NMA) of the elastic network model (ENM) is one of the effective approaches to investigate the structure-encoded motions in proteins. However, the motion modes revealed by the conventional NMA approach do not necessarily correspond to a specific function of protein. In the present work, a new analysis method was proposed to identify the motion modes responsible for a specific function of proteins and then predict the key residue interactions involved in the functional motions by using a perturbation approach. In our method, an internal coordinate that accounts for the specific function was introduced, and the Cartesian coordinate space was transformed into the internal/Cartesian space by using linear approximation, where the introduced internal coordinate serves as one of the axes of the coordinate space. NMA of ENM in this internal/Cartesian space was performed and the function-relevant motion modes were identified according to their contributions to the specific function of proteins. Then the key residue interactions important for the functional motions of the protein were predicted as the interactions whose perturbation largely influences the fluctuation along the internal coordinate. Using our proposed methods, the maltose transporter (MalFGK2) from E. Coli was studied. The functional motions and the key residue interactions that are related to the channel-gating function of this protein were successfully identified. 相似文献
4.
《Bioorganic & medicinal chemistry letters》2014,24(16):3919-3922
A new indole-4,9-dione and their phenoxy derivatives were synthesized and evaluated in vitro against the epimastigote form of Trypanosoma cruzi, Y strain. All of these novel compounds were found to be extremely potent and selective that the standard drug nifurtimox. Interestingly, phenoxyindole-4,9-dione 9d displayed excellent nanomolar inhibitory activity, IC50 = 20 nM, and high selectivity index, SI = 625. In silico studies using MOE program were performed to generate a preliminary pharmacophore model. 相似文献
5.
Modeling soil detachment rates at the regional scale is important for better understanding of the processes of erosion and the development of erosion models. Soil erodibility is an important factor for predicting soil loss, but its direct measurement at the watershed scale is difficult, time-consuming and costly. This study used stepwise multiple-linear regression (MLR) and artificial neural networks (ANNs) to model Water Erosion Prediction Project (WEPP) soil erodibility parameters, including the baseline inter-rill erodibility (Kib), baseline rill erodibility (Krb) and critical shear stress (τcb) of cropland conditions in calcareous soils of northwest Iran. Simulated inter-rill and rill erosion experiments were conducted at 100 locations with three replications. Kib, Krb and τcb and basic soil properties were measured at each location. Auxiliary variables related to soil erodibility were derived from a Landsat 7 satellite image and a 30 m × 30 m digital elevation model (DEM). MLR and ANN models were employed to predict Kib, Krb and τcb using two groups of input variables: i) more easily measurable basic soil properties (pedo-transfer functions (PTFs)) and ii) more easily measurable basic soil properties and auxiliary data (soil spatial prediction functions (SSPFs)). The results indicated that the WEPP models performed poorly in comparison to the derived models. PTFs and SSPFs generated from ANN models provided more reliable predictions than the MLR models. ANN-based SSPF models yielded the best results (with the highest R2 and lowest RMSE values) for predicting Kib and Krb. ANN-based PTF model performed reasonably well for predicting τcb. These results show that information from terrain attributes and remote sensing data are potential auxiliary variables for improving prediction of soil erodibility parameters. 相似文献
6.
7.
Feral cat Felis catus predation on seabirds has been well documented; however, details regarding shifts in feral cat diet in relation to seabird availability, seabird predation rate and impact on seabird population dynamics are scarce. Here, we present data documenting a seasonal shift in feral cat diet at Juan de Nova Island, Mozambique Channel. We also quantify sooty tern Sterna fuscata predation by feral cats and examine the impact on sooty terns over both the short term (by removing individual cats from sub-colonies) and over the longer term by highlighting their influence on population growth rate ( λ ) using a deterministic matrix model. Cat diet shifted dramatically from insects, rats and mice outside the tern breeding season to primarily terns when terns were breeding. The predation rate of sooty terns at Juan de Nova was estimated at 5.94 terns cat−1 day−1 , with a proportion of these (22%) being killed without being consumed ('surplus kills'). When only one cat was removed from each sub-colony, tern predation declined tenfold in the short term. From our matrix model, the annual growth rate for sooty terns was 1.01 in the absence of cat predation. It remained above one until a predation impact equivalent to approximately three times the estimated cat density (12.04 per km2 ) was incorporated. Our results demonstrate that cats preferentially predate and have an impact on breeding sooty terns at Juan de Nova, and that an increase in cat density could lead to negative effects on population growth, despite the large breeding tern population. 相似文献
8.
It is commonly assumed that in order for animal signals to be advantageous, the information being signalled could not have been obtained otherwise, and is therefore ‘cryptic’ or ‘private’. Here, we suggest a scenario in which individuals can gain an advantage by signalling ‘public’ information that is neither cryptic nor private. In that scenario, signalling increases the efficiency with which that ‘public’ information is transmitted. We formalize our idea with a game in which offspring can signal their condition to their parents. Specifically, we consider a resource‐strapped parent who can only invest in one of its two offspring, and we allow offspring the chance to influence parental investment through a signal. A parent in the game seeks to invest in the higher‐quality offspring, which it could identify either through a publicly available cue, such as body size, or by relying on a signal provided by the offspring. We find that if the signal can convey information about offspring quality more efficiently than cues, then signalling of condition between offspring and parents can be favoured by selection, even though parents could potentially have acquired the same information from the cue. Our results suggest that the biological function of signals may be broader than currently considered, and provide a scenario where low cost signalling can be favoured. More generally, efficiency benefits could explain signalling across a range of biological and economic scenarios. 相似文献
9.
Gianluca Gatti 《Computer methods in biomechanics and biomedical engineering》2017,20(8):884-892
A hinged external fixator is used to allow early knee rehabilitation in case of injury or trauma, as an alternative approach to immobilization. It is mainly adopted for the treatment of dislocations, which involve tearing of the ligaments, and it basically consists of two links connected to each other by a revolute joint. Each link is fixed to the femur and tibia via pin fixation, and the revolute joint is approximately aligned to the knee flexion-extension (FE) axis. The advantage in its implantation is to protect ligament reconstruction, while allowing for an aggressive rehabilitation. Traditional fixators only accommodate the functional flexion movement in a limited range, i.e. where the anatomical movement is closer to a planar circular trajectory. This paper presents the conceptual design and implantation procedure of a double-axis fixator, which accommodates both FE and longitudinal internal-external rotation. The procedure is based on accurate knee kinematics measurements and on computer-aided multibody simulations to assist clinicians in the implantation. An experimental test is presented using an artificial knee, and guidelines are given for in vitro studies. The proposed technique may allow for a better understanding of knee kinematics and have the potential advantage to increase the range of motion in postoperative rehabilitation. 相似文献
10.
2001-2010年疏勒河流域植被净初级生产力时空变化及其与气候因子的关系 总被引:4,自引:0,他引:4
通过改进的光能利用率CASA模型估算2001-2010年间疏勒河流域陆地生态系统的净第一性生产力(NPP),采用线性趋势分析、变异系数和Hurst指数等方法,分析了NPP的时空变化特征及其与气候因子的相关性。结果表明:①疏勒河流域NPP的空间分布具有明显差异,空间上呈现西北低、东南高的趋势,且具有较明显的经向"条带"分布特征,2001-2010年,NPP平均值为102.26 gC m-2 a-1。②2001-2010年,疏勒河流域NPP总体呈增长趋势,年际波动较大,NPP明显增加的区域占总面积25.15%,明显减小的区域约占11.93%。③Hurst指数分析显示,疏勒河流域NPP变化的同向特征强于反向特征,其中持续改善地区占总面积的78.3%,21.7%的区域将由改善转为退化。④在年尺度上,降水是植被NPP变化的主要影响因素,NPP与降水呈弱的正相关关系,与温度相关性不显著;在月尺度上,温度是NPP变化的主要控制因子。疏勒河流域NPP对气候因子不存在明显的时滞和累积效应。 相似文献