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1.
Kyung Suk Lee Amanda B. Marciel Alexander G. Kozlov Charles M. Schroeder Timothy M. Lohman Taekjip Ha 《Journal of molecular biology》2014
Single-stranded DNA binding proteins (SSBs) selectively bind single-stranded DNA (ssDNA) and facilitate recruitment of additional proteins and enzymes to their sites of action on DNA. SSB can also locally diffuse on ssDNA, which allows it to quickly reposition itself while remaining bound to ssDNA. In this work, we used a hybrid instrument that combines single-molecule fluorescence and force spectroscopy to directly visualize the movement of Escherichia coli SSB on long polymeric ssDNA. Long ssDNA was synthesized without secondary structure that can hinder quantitative analysis of SSB movement. The apparent diffusion coefficient of E. coli SSB thus determined ranged from 70,000 to 170,000 nt2/s, which is at least 600 times higher than that determined from SSB diffusion on short ssDNA oligomers, and is within the range of values reported for protein diffusion on double-stranded DNA. Our work suggests that SSB can also migrate via a long-range intersegment transfer on long ssDNA. The force dependence of SSB movement on ssDNA further supports this interpretation. 相似文献
2.
对健康的日本沼虾(1.40±0.12)g分别肌肉注射0.6×10~6、2×10~6、4×10~6、6×10~6 CFU/mL的停乳链球菌茵液10μL、注射后3 h、6 h、9 h、12h、24h、5d、10d分别采集肝胰腺、肌肉和鳃组织,测定其中的总超氧化物歧化酶(T-SOD)活性,研究停乳链球菌时日本沼虾T-SOD活性的影响,研究结果显示,肝胰腺中T-SOD活性于注射5d后达到最大值(P0.05),10d后0.6×10~6、2×10~6和4×10~6 CFU/mL,组T-SOD活性下降并接近对照组水平,而最高浓度组(6×10~6 CFU/mL)T-SOD酶活性仅有对照组的46%。肌肉和鳃中T-SOD活性均在注射6 h后达到最大值,注射10 d后,4×10~6和6×10~6 CFU/mL组的肌肉和6×10~6 CFU/mL组的鳃组织中T-SOD活性均仅有对照组的50%左右。另外,肌肉组织中T-SOD的峰值远高于鳃和肝胰腺组织中的峰值。上述结果表明,停乳链球菌不仅影响日本沼虾机体T-SOD酶的活性。而且肌肉、鳃和肝胰腺组织中酶的活性应答时间不同,且组织内酶活性的应答与菌的感染方式有关,另外,注射高浓度停乳链球菌长时间后会降低其组织中T-SOD酶活性。 相似文献
3.
本文以鼻咽癌细胞株CNE2为放射敏感性的研究对象,经不同剂量X射线照射及不同时间培养后分别提取总蛋白,用共聚焦显微拉曼光谱仪检测其拉曼光谱。统计分析表明:被测样品的拉曼光谱中观察到一些可以归属于蛋白质物质的较为明显的基团频率振动峰;不同剂量的X射线照射后,总蛋白质的平均拉曼光谱与对照组谱形基本一致,但与对照组间的光谱存在着对应峰信号强度的不同。实验提示:照射后谱峰强度的增大或减小,提示着相关物质含量有所改变。分析照射后癌细胞总蛋白拉曼光谱的变化情况,结合数学统计方法,以探寻放射敏感性的特征拉曼标志,可以作为研究肿瘤放射敏感性的手段之一。 相似文献
4.
黄土丘陵区生物土壤结皮表面糙度特征及影响因素 总被引:1,自引:0,他引:1
地表糙度是影响地表径流和侵蚀过程的重要属性.生物结皮在干旱半干旱区广泛分布,是地表糙度的影响因子之一.本文采用链条法测定了黄土丘陵区不同发育阶段生物结皮表面糙度特征,分析了不同发育阶段生物结皮表面糙度对坡向、土壤含水量和冻融作用的响应及其与各理化性质的相关性,初步探索了生物结皮对地表糙度的影响及其相关因素.结果表明: 生物结皮显著改变地表糙度,随着生物结皮从藻结皮向藓结皮演替,其糙度先降低后增加,生物结皮发育形成10年以后,其表面糙度基本趋于稳定;研究区早期形成的藻结皮表面糙度较裸土降低47.0%,深色藻结皮(藓类盖度<20%)较裸土降低20.4%,混生结皮(藓类盖度为20%~60%)和苔藓结皮(藓类盖度>70%)表面糙度与深色藻结皮基本一致;坡向对发育10年以上的生物结皮表面糙度的影响不显著;土壤含水量影响地表糙度特征.研究区浅色藻结皮表面糙度随水分变化较为剧烈;随着生物结皮发育,深色藻结皮、混生结皮和苔藓结皮表面糙度随水分的变化趋于平缓.冻融增加了生物结皮表面糙度.浅色藻结皮经两次冻融后表面糙度增加29.7%;深色藻结皮、混生结皮和藓结皮表面糙度的影响需经过反复冻融才有所体现.生物结皮表面糙度与藓结皮盖度呈显著正相关(P<0.1). 相似文献
5.
尽管国内外对养殖污水处理已提出了一系列的工艺技术,但因经济原因养殖污水直接灌溉农田在我国农村地区仍较为常见.为了解长期畜禽养殖污水直灌对稻田土壤质量的影响,在浙江省绍兴市柯桥区选择了养殖污水直灌不同年限(0、4、7、13年)的稻田,比较研究了养殖污水直接灌溉对稻田土壤不同深度土层中各形态氮和磷含量的影响,探讨了长期养殖污水灌溉对氮、磷在土壤剖面中垂直迁移的影响.结果表明: 长期养殖污水直接灌溉可显著提高稻田土壤中氮和磷的积累,积累量随灌溉年限的增长而增加,其中磷素的增幅高于氮素.养殖污水灌溉4、7和13年后,土壤表层中全P和全N分别比对照增加了43.6%、95.2%、1484%和7.7%、17.0%、28.4%.土壤氮素的变化为NH4+-N、NO3--N>酸解有机氮>非酸解有机氮;土壤有效磷的变化明显大于全磷.长期养殖污水灌溉可促进氮、磷在土壤剖面中的垂直迁移,增加对地下水的污染风险.
相似文献
6.
AxenicTrentepohlia odorata was cultured at three different NH4Cl levels (3.5 × 10–2, 3.5 × 10–3, 3.5 × 10–4 M) and three different light intensities (48, 76, 122 µmol m–2 s–1). Chloride had no effect on growth over this range of concentration. High light intensity and high NH4Cl concentration enhanced the specific growth rate. The carotenoid content increased under a combination of high light intensity and low N concentration. WhenD. bardawil was exposed to the same combination of growth conditions, there was an increase in its carotenoid content. The light saturation and the light inhibition constants (K
s andK
i, respectively) for growth, and the saturation constant (K
m) for NH4Cl were determined. TheK
s andK
i values were higher inT. odorata (66.7 and> 122 mol m–2 s–1, respectively) than inD. bardawil (5.1 and 14.7 µmol m–2 s–1, respectively). TheK
m value determined at 122 µmol m–2 s–1, however, was lower inT. odorata (0.048 µM) than inD. bardawil (0.062 µM).Author for correspondence 相似文献
7.
Response of small birch plants (Betula pendula Roth.) to elevated CO2 and nitrogen supply 总被引:5,自引:1,他引:4
Small birch plants were grown for up to 80 d in a climate chamber at varied relative addition rates of nitrogen in culture solution, and at ambient (350 μmol mol-1) or elevated (700 μmol mol-1) concentrations of CO2. The relative addition rate of nitrogen controlled relative growth rate accurately and independently of CO2 concentration at sub-optimum levels. During free access to nutrients, relative growth rate was higher at elevated CO2. Higher values of relative growth rate and net assimilation rate were associated with higher values of plant N-concentration. At all N-supply rates, elevated CO2 resulted in higher values of net assimilation rate, whereas leaf weight ratio was independent of CO2. Specific leaf area (and leaf area ratio) was less at higher CO2 and at lower rates of N-supply. Lower values of specific leaf area were partly because of starch accumulation. Nitrogen productivity (growth rate per unit plant nitrogen) was higher at elevated CO2. At sub-optimal N-supply, the higher net assimilation rate at elevated CO2 was offset by a lower leaf area ratio. Carbon dioxide did not affect root/shoot ratio, but a higher fraction of plant dry weight was found in roots at lower N-supply. In the treatment with lowest N-supply, five times as much root length was produced per amount of plant nitrogen in comparison with optimum plants. The specific fine root length at all N-supplies was greater at elevated CO2. These responses of the root system to lower N-supply and elevated CO2 may have a considerable bearing on the acquisition of nutrients in depleted soils at elevated CO2. The advantage of maintaining steady-state nutrition in small plants while investigating the effects of elevated CO2 on growth is emphasized. 相似文献
8.
CO2 exchange between the atmosphere and soil algal crusts of the Trachypogon savannas of the Orinoco Llanos has been analyzed
using an open gas exchange system. These savannas encompass a wide range of physiognomic types, from herbaceous communities
to savanna woodlands. A maximum CO2 flux of 0.207 mg m-2 s-1 was measured in the crusts of the Guanipa savannas, while in the other examined crusts (0.035–0.105 mg m-2 s-1) the flux was similar to values reported for terrestrial algae. The CO2 flux data were statistically fitted to the photosynthetically active radiation by a logarithmic relationship, and the photosynthetic
efficiencies of the crusts were compared. The activation energy calculated for the CO2 fixation indicates that limitations by diffusion and photochemical processes were excluded in the Guanipa crusts (above 12
kcal mole-1), whereas they were evident in the other crust studied. An optimum CO2 incorporation as a function of the crust water potential was established and carbon gain strategies were proposed on the
basis of the results and characteristics of the habitats. 相似文献
9.
Albert Getabu 《Hydrobiologia》1992,232(1):91-97
Length-frequency data collected from fish landings in the Kenya waters of Lake Victoria were used to estimate the growth parameters,
total mortality rate and growth performance index in Oreochromis niloticus. The asymptotic length, (L
∞) and the ratio of the total mortality rate (Z) to the growth constant (K), were estimated to be 64.6 cm and 3.219 respectively. K was 0.254 y-1, Z was 0.818 y-1 and the growth performance index θ′ = Log10
K + 2 log10
L∞ = 3.025, which is rather high as compared to other tilapia populations in natural waters. 相似文献
10.
Laboratory experiments have shown appreciable losses of ammonia after injection of anhydrous ammonia into dry and wet soils.
In this study losses of ammonia injected into a moist (tension 10 kPa), dry (tension 160 kPa) and a wet (tension 1.6 kPa)
sandy loam were measured under field conditions using wind tunnels. Losses were insignificant from a moist soil. However losses
from a dry and a wet soil were 20% and 50% of injected ammonia, respectively. From the dry soil, losses of gaseous ammonia
took place within the first hours after injection, which indicates a rapid transport through cracks and voids. From the wet
soil, 20% of the injected ammonia was lost more gradually between 6 h and 6 d. This indicates that upward movement of water
due to evaporation may be the cause of these ammonia losses which proceeded for longer periods. 相似文献