The role of modern and fossil cyanobacterial borings in bioerosion and bathymetry

Measurements on modern coral reefs at Lee Stocking Island (Bahamas) illustrate that boring cyanobacteria species make a major contribution to microboring bioerosion rates. Borings attributed to cyanobacteria also occur in fossil environments. Bioerosional studies on Permian and Triassic reefs show similar intensities to those observed on modern equivalents. The importance of borings assigned to cyanobacterial activity is even more apparent in paleobathymetry. Comparison of the bathymétrie ranges known from modern and fossil microborings demonstrates a preference of boring cyanobacteria for shallow marine environments. Furthermore, some traces are linked to distinct portions of the shallow euphotic zone. They significantly contribute to characterize typical microboring assemblages, which are used for paleodepth reconstructions. In contrast to these stenobathic species, one cyanobacterial species turned out to be eurybathic. It has been recorded as deep as the dysphotic zone but may even extend to the aphotic zone.     

Species‐specific responses to island connectivity cycles: refined models for testing phylogeographic concordance across a Mediterranean Pleistocene Aggregate Island Complex

The contribution of Pleistocene sea level changes to diversification patterns in archipelagos around the world, and specifically whether the repeated cycles of island connectivity and isolation acted as a ‘species pump’ is debated. The debate has been perpetuated in part because of the type of evidence used to evaluate the species‐pump hypothesis. Specifically, existing tests of the ‘Pleistocene Aggregate Island Complex’ (PAIC) model of diversification interpret the lack of concordant divergence times among multiple codistributed taxa as a rejection of the PAIC model. However, the null expectation of concordance disregards taxon‐specific ecological traits and geographic characteristics that may affect population persistence and gene flow among islands. Here, we study the factors affecting population divergence in thirteen flightless darkling beetle species (Coleoptera: Tenebrionidae) across the PAIC system of the Cycladic plateau in the Aegean archipelago. Based on isolation‐by‐resistance analyses, hierarchical amova and the degree of genealogical sorting on individual islands, we identify a major effect of bathymetry and habitat stability on the levels of genetic divergence across the PAIC, with island size and body size playing a secondary role as well. We subsequently use bathymetric maps and habitat association to generate predictions about the set of islands and group of taxa expected to show phylogeographic concordance. We test these predictions using hierarchical approximate Bayesian computation and show how our interpretations regarding the role of PAICs as drivers of divergence change when relying on a null expectation of concordance compared to a refined model that takes geography and ecological traits into account.     

Vertical distribution of benthic nematodes in an oligotrophic lake: seasonality, species and age segregation

The vertical distribution of nematodes up to 20 cm sediment depth was studied over a one-year period in the alpine, oligotrophic lake Königssee. Ten water depths were examined, four of which correspond to the littoral (1 m, 2 m, 5 m, 10 m), three to the littoriprofundal (15 m, 20 m, 30 m) and three to the profundal (60 m, 120 m, 190 m). The sediment was devided into four layers (0–2 cm, 2–5 cm, 5–10 cm and 10–20 cm). (1) The highest proportion of nematodes was found in the top layer. Out of 45 263 nematodes, 89% were found in the first 5 cm of the sediment and only 1 % deeper than 10 cm. (2) The proportion of nematodes in the top layer increased along with water depth. Water depth was a better predictor of percentage of nematodes in the top layer than particle size or content of organic carbon in the sediment. (3) There were considerable differences among species in their vertical distribution in the sediment. (4) There was a significant trend for juveniles to occupy more superficial layers than adults across various species. (5) There are time related vertical preferences among adults and juveniles of several nematode species across the year, suggesting vertical migration in the sediment (e.g. Aphanolaimus aquaticus Daday, Eumonhystera longicaudatula Gerlach & Riemann, Tobrilus gracilis Bastian, Monhystera paludicola de Man, Ethmolaimus pratensis de Man and Ironus tenuicaudatus de Man). The factors determining the vertical variation in nematode abundance in freshwater systems across space and time are still unknown.     

Spatio-temporal distribution of sperm whales (Physeter macrocephalus) off Kaikoura,New Zealand,in relation to bathymetric features

Using a shore-based station we monitored the position of sperm whales (Physeter macrocephalus) within the Kaikoura submarine canyon from 2010 to 2012. We tracked sperm whales using a theodolite station for a total of 290 days. We extracted the distance from the nearest coast, the depth and the bathymetric slope using ArcGIS 10.1. We estimated the seasonal spatial distribution of sperm whales using general additive models. The distribution varied significantly between seasons; individuals were found in deeper water and further offshore in the spring than in winter. This study improved our understanding of the variability of sperm whale distribution patterns off Kaikoura. We determined that the distribution was linked to the bathymetric features and we hypothesized that whales adapted their use of the submarine canyon in relation to food aggregation. We would encourage further studies to evaluate the sperm whale relationship with oceanographic variables off Kaikoura.     

Ammonoid palaeobiology

This, the second in the series of virtual issues of Palaeontology, charts the development of concepts in ammonoid palaeobiology, with reference to nine selected papers published in this journal from 1965 onwards. These cover a broad range of topics: goniatite bed palaeoecology, systematics and evolution in Scaphites, flow dynamics of cephalopod shells, shell growth and differential geometry, septal function, ammonoid assemblage analysis, evolutionary trends, stratocladistics, and soft part preservation. Despite the growth and success of palaeobiological interpretations of ammonoid evolution, life, morphology and environments over the last 50 years, ammonoid research retains a great potential for the future.     

Jurassic radiolarites in a Tethyan continental margin (Subbetic, southern Spain): palaeobathymetric and biostratigraphic considerations

A region of the pelagic Subbetic basin within the Southern Iberian Continental Margin is studied in lithostratigraphical and biostratigraphical detail. Jurassic radiolarites (Jarropa Radiolarite Formation, Bathonian–Oxfordian) interbedded with shallow-water marine limestones have been recognized. Underlying the radiolarites (Camarena Formation, Bajocian) are oolitic limestones showing shallowing-upward cycles with karstic surfaces on the top, corresponding to deposition on an isolated carbonate platform on volcanic edifices. The Milanos Formation (upper Kimmeridgian–Tithonian), overlying the radiolarites, contains calciclastic strata with hummocky cross-stratification, which indicate outer carbonate ramp deposition. In the Jarropa Radiolarite Formation some calcisiltite strata with hummocky cross-stratification have been found. The bathymetry of the Subbetic Jurassic pelagic sediments, including the radiolarites, is considered as moderate or shallow in depth. We suggest that the pelagic character of the Jurassic sediments in this margin and their equivalents in other Alpine domains is a consequence of distance from the continent (beyond the pericontinental platform) but not necessarily of depositional depth.     

Lake Patzcuaro,Mexico: results of a new morphometric study and its implications for productivity assessments

Data for 25 morphometrical parameters describing the geomorphology of Lake Patzcuaro, Michoacan, Mexico have been derived from an up-to-date bathymeric map with contour-lines at 1.0 m intervals. Maximum depths were observed in the northern part of the lake whereas considerable shallow areas are developing in the south. Insulosity is continuously modified due to certain areas becoming part of the mainland and the appearance of new islands with increasing shallowness and man-made channels. The hydrographic survey was evaluated using the optimization model suggested by Hakanson (1978). An information value of 0.788 for 12 contour lines in the new bathymetric map is reported. The usefulness of accurate morphometrical data in process-orientated modelling for lake management is discussed.     

AN ALGORITHM TO IMPROVE GEOLOCATION POSITIONS USING SEA SURFACE TEMPERATURE AND DIVING DEPTH

The at-sea movement of marine mammals is an important component of their foraging ecology, but has been difficult to study. Geolocation timed-data recorders (GLTDRs) estimate positions using measured light level to calculate day length and local noon. It is well known that these location estimates are imprecise (mean error of > 1°). Satellite telemetry generally provides a more accurate, but also more expensive means of monitoring movement. We evaluated the accuracy and precision of geolocation positions by comparing these locations with satellite data from Service Argos for eight free-ranging gray seals ( Halichoerns grypus ) equipped with both a satellite-linked data recorder (SDR) and a GLTDR. Geolocation positions differed by 1,026.0 ± 292.28 km from the corresponding Argos locations. We developed an algorithm to correct geolocation positions by comparing surface water temperature (ST) and dive depth collected by GLTDRs with existing sea-surface temperature and bathymetry databases. The corrected positions were significantly closer (P < 0.025) to the Argos locations of these seals (94.2 ± 8.22 km). The original geolocation positions would have led to incorrect conclusions about the use of space by gray seals; however, the corrected positions can be reliably used to study the large-scale spatial distribution of individuals.     

Demersal trawl discards with spatial and bathymetric emphasis in the Turkish coast of the Aegean Sea

The aim of the present study is to investigate the spatial and bathymetric distribution of demersal trawl discards in the Turkish coast of the Aegean Sea. Trawl hauls were performed in the legal trawling areas of the Turkish coast of the Aegean Sea (Çanakkale, Foça, Karaburun, S??ac?k, Güllük) between 2010 and 2012 by commercial trawlers. Depth of the trawl hauls ranged from 30?m in the south to 450?m in the north. As a result of 311 trawl samples, 200 species belonging to eight taxonomic groups (Porifera, Cnidaria, Annelida, Arthropoda, Mollusca, Echinodermata, Tunicata, Chordata) were identified. The changes in species composition based on depth and region were determined to be statistically significant. It was found that species composition distinctly changed around 200?m. In a regional assessment it was determined that the Turkish coast of the Aegean Sea is divided into three sub-regions, i.e. Çanakkale, Foça-Karaburun-S??ac?k and Güllük. The results of similar studies conducted in the Mediterranean were investigated and compared with the findings of this study.