9. The algal flora of the Primorsky Region, Russian Far East

A survey of the freshwater algal flora of the Primorsky Region, Russian Far East, is presented. During more than 70 years of investigations 1659 species (including varieties and forms 2276 taxa) belonging to 346 genera of different groups of algae have been recorded from this territory. The Primorsky Region is rich in habitats attractive to algae-rivers, lakes, reservoirs, and ponds. The details of the distribution of algae in different types of waterbodies have been examined. The algal flora of the region is comparable to the areas, and its taxonomical structure is typical for Eurasia. From this territory some new species and varieties have been described — Achnanthes chankensis, Cymbella ventricosa var. hankensis, Surirella alisoviana, and others. The flora includes some rare species — Fragilaria magocsyi, Perone dimorpha, and Heterothrix monochloron, and some endemics of Asia — Navicula scutelloides var. baicalensis, N. globulifera var. nipponica, Gomphonema sphaerophorum, and Surirella tientsinensis.     

Intra- and interbreed genetic variations of mitochondrial DNA major non-coding regions in Japanese native dog breeds [Canis familiaris)

Mitochondrial DNA (mtDNA) major non-coding regions were amplified from 73 dogs of eight Japanese native dog breeds and from 21 dogs of 16 non-Japanese dog breeds by the polymerase chain reaction and their DNA sequences were determined. A total of 51 nucleotide positions within the non-coding region (969–972 base pairs) showed nucleotide variations of which 48 were caused by transition. These nucleotide substitutions were abundant in the region proximate to tRNA^Pro. In addition to the nucleotide substitutions, the dog mtDNA D-loop sequences had a heteroplasmic repetitive sequence (TACACGTÀCG) involving size variation. The DNA sequences of the non-coding region were classified into four different groups by phylogenetic analysis and the deepest branchpoints of this dog phylogeny was calculated to about 100 000 years before the present. Phylogenetic analysis showed that Japanese native dog breeds could not be clearly delimited as distinct breeds. Many haplotypes found in members of some clustering groups were seen in each dog breed, and interbreed nucleotide differences between Japanese dog breeds were almost the same as the intrabreed nucleotide diversities.     

Gender differences in anaerobic power tests

The purpose of this study was to determine if the differences in anaerobic power between males and females could be accounted for by differences in body composition, strength, and neuromuscular function. A total of 82 untrained men and 99 women took part in the study. Body composition, somatotype, isometric strength, neuromuscular function were measured, and four anaerobic power tests performed. The men were significantly different from the women on all strength, power, and neuromuscular measurements except reaction time and on all anthropometric and somatotype dimensions except ectomorphy. Strength and anthropometric dimensions were similarly related to anaerobic power values within each sex. Relative fat (%fat) exerted different degrees of influence on sprint and jump performances in each sex. Removing the influence of anthropometric, strength, and neuromuscular differences by analysis of covariance reduced, but did not remove, the significant differences between the sexes. Therefore, factors other than lean body mass, leg strength, and neuromuscular function may be operating in short-term, explosive power performances to account for the differences between the sexes. The task-specific nature of anaerobic power tests and the relatively large influence of anthropometric factors on power production were confirmed.     

The spectral structure of vocalizations match hearing sensitivity but imprecisely in Philautus odontotarsus

It is generally thought that for species using vocal communication the spectral properties of the sender’s calls should match the frequency sensitivity of the receiver’s auditory system. Nevertheless, few studies have investigated both sender and receiver characteristics in anuran species. In the present study, auditory brainstem responses (ABRs) were recorded in the serrate legged treefrog, Philautus odontotarsus, in order to determine if male call spectral structure and hearing sensitivity in males and females have co-evolved in this species. The results showed that the spectral structures of male vocalization match both male and female hearing sensitivity, even though the dominant frequencies of male calls (2.5 kHz) are mismatched with the regions of best frequency sensitivity (1.4 and 2.8 kHz). In addition, the results show that, in contrast with most previous ABR studies in non-human animals, but consistent with human studies, there are noticeable sex differences in peripheral auditory sensitivity in Philautus insofar as females exhibit lower auditory thresholds than males across the entire 1.8–18 kHz frequency range. The results also show that the dominant frequency of male calls is negatively correlated with body size, indicating that call characteristics reflect body size in this species which may be used by females during mate choice.     

不同类型城市快速扩张区域人工景观对自然景观的生态安全胁迫效应比较

城镇化进程中的建成区扩张会对区域自然生态安全格局造成胁迫效应.本文选取北京通州、河北正定、天津塘沽及福建厦门4个内陆和沿海城市为研究区,通过景观生态学原理构建区域景观胁迫分析指标,对比分析4个城市快速扩张区域在快速城镇化过程中表现出的景观格局特征,研究不同区域及城镇化背景下人工景观对耕地、绿/林地、水体和未利用地等自然景观生态安全格局的胁迫作用差异.结果表明: 2015年,通州、正定、塘沽和厦门4个城市扩张区的景观侵蚀指数分别为1.039、0.996、1.239和0.945,自然景观都表现出显著的被侵蚀程度;但不同城市区域的各类自然景观类型受威胁的程度不同,通州、正定和塘沽以未利用地和水域为主,厦门则以耕地和水域为主,4个城市水域威胁指数均超过0.743;内陆城市的水域和未利用地景观分离度指数均大于沿海城市,在空间上表现为沿海城市水体分布较内陆城市更聚集;相对于其他自然景观,未利用地和水域是受人工景观胁迫最大的两种自然景观.     

Structural Insight into Chromatin Recognition by Multiple Domains of the Tumor Suppressor RBBP1

Retinoblastoma-binding protein 1 (RBBP1) is involved in gene regulation, epigenetic regulation, and disease processes. RBBP1 contains five domains with DNA-binding or histone-binding activities, but how RBBP1 specifically recognizes chromatin is still unknown. An AT-rich interaction domain (ARID) in RBBP1 was proposed to be the key region for DNA-binding and gene suppression. Here, we first determined the solution structure of a tandem PWWP-ARID domain mutant of RBBP1 after deletion of a long flexible acidic loop L12 in the ARID domain. NMR titration results indicated that the ARID domain interacts with DNA with no GC- or AT-rich preference. Surprisingly, we found that the loop L12 binds to the DNA-binding region of the ARID domain as a DNA mimic and inhibits DNA binding. The loop L12 can also bind weakly to the Tudor and chromobarrel domains of RBBP1, but binds more strongly to the DNA-binding region of the histone H2A-H2B heterodimer. Furthermore, both the loop L12 and DNA can enhance the binding of the chromobarrel domain to H3K4me3 and H4K20me3. Based on these results, we propose a model of chromatin recognition by RBBP1, which highlights the unexpected multiple key roles of the disordered acidic loop L12 in the specific binding of RBBP1 to chromatin.     

Three-dimensional model on thermal response of skin subject to laser heating

A three-dimensional (3D) multilayer model based on the skin physical structure is developed to investigate the transient thermal response of human skin subject to laser heating. The temperature distribution of the skin is modeled by the bioheat transfer equation, and the influence of laser heating is expressed as a source term where the strength of the source is a product of a Gaussian shaped incident irradiance, an exponentially shaped axial attenuation, and a time function. The water evaporation and diffusion is included in the model by adding two terms regarding the heat loss due to the evaporation and diffusion, where the rate of water evaporation is determined based on the theory of laminar boundary layer. Cryogen spray cooling (CSC) in laser therapy is studied, as well as its effect on the skin thermal response. The time-dependent equation is discretized using the finite difference method with the Crank–Nicholson scheme and the stability of the numerical method is analyzed. The large sparse linear system resulted from discretizing the governing partial differential equation is solved by a GMRES solver and the expected simulation results are obtained.