Harmonizing Labeling and Analytical Strategies to Obtain Protein Turnover Rates in Intact Adult Animals

Changes in the abundance of individual proteins in the proteome can be elicited by modulation of protein synthesis (the rate of input of newly synthesized proteins into the protein pool) or degradation (the rate of removal of protein molecules from the pool). A full understanding of proteome changes therefore requires a definition of the roles of these two processes in proteostasis, collectively known as protein turnover. Because protein turnover occurs even in the absence of overt changes in pool abundance, turnover measurements necessitate monitoring the flux of stable isotope–labeled precursors through the protein pool such as labeled amino acids or metabolic precursors such as ammonium chloride or heavy water. In cells in culture, the ability to manipulate precursor pools by rapid medium changes is simple, but for more complex systems such as intact animals, the approach becomes more convoluted. Individual methods bring specific complications, and the suitability of different methods has not been comprehensively explored. In this study, we compare the turnover rates of proteins across four mouse tissues, obtained from the same inbred mouse strain maintained under identical husbandry conditions, measured using either [¹³C₆]lysine or [²H₂]O as the labeling precursor. We show that for long-lived proteins, the two approaches yield essentially identical measures of the first-order rate constant for degradation. For short-lived proteins, there is a need to compensate for the slower equilibration of lysine through the precursor pools. We evaluate different approaches to provide that compensation. We conclude that both labels are suitable, but careful determination of precursor enrichment kinetics in amino acid labeling is critical and has a considerable influence on the numerical values of the derived protein turnover rates.     

FXR在胃粘膜肠化生及胃癌中的表达及其意义研究

目的:研究FXR在胃炎,胃粘膜肠化生及胃癌组织中的表达,分析其在胃癌发生中的意义。方法:采用免疫组化方法检测FXR在55例胃炎组织,61例胃黏膜肠化生组织及61例胃癌组织中的表达,利用统计学方法 SPSS17.0软件分析其在三种组织中的表达变化,结合文献回顾,分析FXR在胃癌发生中的意义。结果:FXR在胃黏膜肠化生中的表达明显高于胃炎组织(P0.05),而在胃癌组织中,FXR的表达显著低于胃粘膜肠化生组织(P0.05)。结论:FXR是一个潜在的胃癌发生生物标记物,其具体机制有待于进一步探索。     

甘肃鼢鼠血象及其与低氧适应的关系

甘肃鼢鼠(Myospalax cansus)是一种严格营地下生活的鼠类,其形态、行为及生理特征均与地面鼠不同。为探讨甘肃鼢鼠适应低氧环境的机理,本研究采用血象指标测定方法,对甘肃鼢鼠低氧适应前后的红细胞数、血红蛋白浓度、红细胞压积等各血象指标进行测定。结果显示,甘肃鼢鼠低氧适应后红细胞数、血红蛋白浓度和红细胞压积均显著升高,而平均红细胞体积、平均红细胞血红蛋白及平均红细胞血红蛋白浓度明显下降。与地面生活的啮齿动物低氧适应后血象相比,甘肃鼢鼠红细胞数量多,红细胞压积大,血红蛋白浓度高,红细胞膜表面积大,血红蛋白的利用率较高,可能是对低氧环境适应的一种途径。     

馆藏植物标本与iFlora

构建准确、有效的物种遗传信息库并运用其作为主要的物种鉴定检索数据库,是新一代植物志（iFlora）与传统植物志的本质区别。采集并准确鉴定数以万计的植物样品用于建立遗传信息库存在一定困难,随着遗传信息获取技术的快速发展,使馆藏植物标本成为获取遗传信息的重要补充,并具有提升遗传信息库建设速度和可靠性的较大潜能。本文结合已有的研究和实验室多年工作实践,论述了植物标本作为iFlora物种遗传信息提取材料的可行性和不可替代性;总结了标本遗传信息提取过程中的主要困难和存在问题,并提出一些解决方法;阐述了使用馆藏标本特别是利用模式标本材料构建遗传信息标准库对iFlora构建的重要作用和意义。     

适当浓度的过氧化氢诱导人支气管上皮细胞发生钙振荡

包括过氧化氢（Hzoz）在内的活性氧通过引起细胞内钙的变化而造成细胞损伤。然而,不同浓度的H202可以导致细胞内不同的钙变化,并激活不同的信号通路。细胞内钙振荡是其中的一种钙信号变化形式,钙振荡可以调控转录因子NF—KB的活性。该研究探讨可以诱导支气管上皮细胞内钙振苏发生的H2o2浓度。体外培养人支气管上皮细胞,采取钙离子荧光探针Fura_2标记细胞。并使用离子成像系统,观测不同浓度的H：0：（0～1000μmol／L）作用下细胞内钙浓度的变化。结果发现,低于50μmol／L的H202仅仅引起“钙火花”;50～500μmol／L的H202导致细胞内钙振荡的发生;而1000μmol／L的H202引起细胞内持续的高钙;同时也证实150μmol／L的H202诱发明显的钙振荡,而钙振荡随后引起了NF—KB活性的升高。该研究提示,适当浓度的H：0：可以诱发支气管上皮细胞内钙振荡的发生,推测可能是活性氧导致慢性气道炎症损伤的一个机制。     

Salinity Impact on Bacterial Community Composition in Five High-Altitude Lakes from the Tibetan Plateau,Western China

The influence of salinity and geographical distance on bacterial community composition (BCC) in five freshwater, oligosaline or polysaline lakes located at altitudes higher than 4400 m on the central and southern Tibetan Plateau were investigated using the 16S rRNA gene clone library approach together with multivariate analysis of environmental variables. A total of 10 clone libraries were constructed with two libraries in each lake, one in the epilimnion and the other in the hypolimnion. Geographical distance was not found to impact BCC significantly, but salinity, chl a and lake hydraulic retention time were significant factors influencing the BCC. Bacteria in lakes located on the central and southern Plateau owned the same community composition as that observed from the eastern Tibetan lakes. They were both predominated by Bacteroidetes and Cyanobacteria, had low taxon richness, and similar typical freshwater clusters and distributed characteristics. Supplemental materials are available for this article. Go to the publisher's online edition of Geomicrobiology Journal to view the supplemental file.     

Theophylline Steady-State Pharmacokinetics: Recent Concepts and Their Application in Chronotherapy of Reactive Airway Diseases

With the introduction of sustained-release theophyllíne formulations for once-daily dosing or for unequally divided twice-daily dosing, comparison with conventional equally divided twice-daily dosing has been focused on nocturnal serum theophylline concentrations (STCs), plateau properties and peak-trough fluctuation. The merits of various steady-state characteristics such as nocturnal excess, plateau time, residual concentration, peak-trough fluctuation, swing and AUC fluctuation are illustrated by 15 data sets from 7 multiple-dose studies, each including either 10–12 healthy volunteers or 12–20 COPD-patients. In all of the studies, STCs were determined at least every 2 hr over a 24-hr period in steady-state. Included in the studies were 7 sustained-release theophylline formulations which were administered either once daily (in the morning or in the evening), or twice daily (either equally divided, or unequally divided with one-third of the dose being given in the morning and two-thirds in the evening).     

低温胁迫后抗寒茶树品种‘紫阳圆叶’的基因差异表达分析

采用DDRT—PCR技术,对低温（4℃）胁迫处理不同时间（0、8、12、24和48h）后茶树[Camellia sinensis（Linn．）O．Ktze．]抗寒品种‘紫阳圆叶’（‘Ziyangyuanye’）叶片中差异表达的基因进行分离和测序,并采用半定量RT-PCR对差异表达基因的表达特性进行了比较。结果表明：有12个引物对扩增出有明显差异的cDNA片段,其中3个片段是与抗寒性相关的差异片段,分别被命名为Csgsf．Cscafl和Cscaf2,碱基数分别为217、316和232bp。比对结果显示：Cscaf与茶树品种‘安吉白茶’（‘Anjibaicha’）和‘龙井43’（‘Longjing43’）的谷氨酰胺合成酶基因的同源性分别为96％和91％,与菜豆（Phaseolus vulgaris Linn．）、蒺藜苜蓿（Medicago truncatula Gaertn．）、油棕（ElaeisguineensisJacq．）、西洋参（Panax quinquefolius Linn．）和水稻（Oryza sativa Linn．）等植物的谷氨酰胺合成酶的基因序列同源性均达到90％以上,因此,Cscafl应为茶树谷氨酰胺合成酶基因片段;Cscaf2与干旱胁迫条件下茶树表达的cDNA的同源性为100％,为茶树应答干旱和低温胁迫的基因片段;Cscafl未检索出同源序列,推测其为与冷胁迫相关的未知基因片段。半定量RT—PCR分析结果表明：Cscafl和Cscafl在低温胁迫的初始期即开始表达且表达量随低温胁迫时间延长逐渐下调;而Cscaf2的表达量随低温胁迫时间延长逐渐上调并在胁迫48h后达到最大,3个片段的表达特性均与差异扩增结果相符。     

胃肝样腺癌的临床病理特征

目的探讨胃肝样腺癌（hepatoid adenocarcinoma of the stomach,HAS）的临床病理学特点、发生机制和免疫组化特征,以提高诊断水平。方法收集并分析5例胃肝样腺癌的临床特征和病理资料,采用HE染色、免疫组化方法,并复习文献。结果组织学胃肝样腺癌具有管状腺癌、粘液性癌和肝样分化腺癌的移行过渡,肿瘤细胞呈小梁状、巢团状,间质为丰富的血窦。免疫表型胃肝样腺癌AAT（5／5）、ACT（5／5）、CEA（5／5）、AFP（4／5）均为阳性,Heppar1灶性阳性（2／5）。结论胃肝样腺癌是一种少见的高度恶性、侵袭性强的特殊类型胃癌,组织学呈肝细胞样腺癌,免疫表型AFP、AAT和ACT阳性有助诊断。     

稃的有无对大赖草种子扩散与萌发特性的影响

对大赖草[Leymus racemosus（Lam．）Tzvel．]带稃种子和去稃种子的扩散性、萌发率、活力及吸水性和失水性的差异进行了比较。结果表明：在静止空气中带稃种子的降落速度显著小于去稃种子,分别为3．96和4．81m·s-1;而在风速1和4m·s-1的水平气流中带稃种子的扩散距离（15．26和11．86cm）均显著大于去稃种子（27．80和21．60cm）。培养20d后,带稃种子和去稃种子的萌发率分别为99％和97％,差异不显著;在自然条件及60℃高温条件下,带稃种子和去稃种子的活力无显著差异。带稃种子的吸水饱和时间和吸水量均显著大于去稃种子,而其失水速率小于后者但二者差异不显著。研究结果显示：稃对大赖草种子萌发和活力均无显著影响,但可增加种子的风媒扩散能力、有效保持种子含水量并能降低种子失水速率,对大赖草适应干旱的沙漠环境具有重要作用。