How to induce defense responses in wild plant populations? Using bilberry (Vaccinium myrtillus) as example

Inducible plant defense is a beneficial strategy for plants, which imply that plants should allocate resources from growth and reproduction to defense when herbivores attack. Plant ecologist has often studied defense responses in wild populations by biomass clipping experiments, whereas laboratory and greenhouse experiments in addition apply chemical elicitors to induce defense responses. To investigate whether field ecologists could benefit from methods used in laboratory and greenhouse studies, we established a randomized block‐design in a pine‐bilberry forest in Western Norway. We tested whether we could activate defense responses in bilberry (Vaccinium myrtillus) by nine different treatments using clipping (leaf tissue or branch removal) with or without chemical treatment by methyljasmonate (MeJA). We subsequently measured consequences of induced defenses through vegetative growth and insect herbivory during one growing season. Our results showed that only MeJA‐treated plants showed consistent defense responses through suppressed vegetative growth and reduced herbivory by leaf‐chewing insects, suggesting an allocation of resources from growth to defense. Leaf tissue removal reduced insect herbivory equal to the effect of the MeJa treatments, but had no negative impact on growth. Branch removal did not reduce insect herbivory or vegetative growth. MeJa treatment and clipping combined did not give an additional defense response. In this study, we investigated how to induce defense responses in wild plant populations under natural field conditions. Our results show that using the chemical elicitor MeJA, with or without biomass clipping, may be a better method to induce defense response in field experiments than clipping of leaves or branches that often has been used in ecological field studies.     

华北地区针叶林下凋落物层化学性质的研究

森林凋落物中贮积了大量的有机、无机养分物质,它是森林土壤自然肥力的重要来源之一。在森林生态系统中,养分物质的内部循环主要是通过凋落物来实现的。在分解、转化过     

Sensing cellular biochemistry with fluorescent chemical–genetic hybrids

Fluorescent biosensors are powerful tools for the detection of biochemical events inside cells with high spatiotemporal resolution. Biosensors based on fluorescent proteins often suffer from issues with photostability and brightness. On the other hand, hybrid, chemical–genetic systems present unique opportunities to combine the strengths of synthetic, organic chemistry with biological macromolecules to generate exquisitely tailored semisynthetic sensors.     

Counter‐perfume: using pheromones to prevent female remating

Strong selection to secure paternity in polyandrous species leads to the evolution of numerous chemicals in the male's seminal content. These include antiaphrodisiac pheromones, which are transmitted from the male to the female during mating to render her unattractive to subsequent males. An increasing number of species have been shown to use these chemicals. Herein, I examine the taxonomic distribution of species using antiaphrodisiac pheromones, the selection pressures driving their evolution in both males and females, and the ecological interactions in which these pheromones are involved. The literature review shows a highly skewed distribution of antiaphrodisiac use; all species currently known to use them are insects with the exception of the garter snakes Thamnophis sirtalis parietalis and T. radix. Nonetheless, many taxa have not yet been tested for the presence of antiaphrodisiacs, in groups both closely and distantly related to species known to express them. Within the Insecta, there have been multiple cases of convergent evolution of antiaphrodisiac pheromones using different chemical compounds and methods of transmission. Antiaphrodisiacs usually benefit males, but their effect on females is variable as they can either prevent them from mating multiple times or help them reduce male harassment when they are unreceptive. Some indirect costs of antiaphrodisiacs also impact both males and females, but more research is needed to determine how general this pattern is. Additional research is also important to understand how antiaphrodisiacs interact with the reproductive biology and sexual communication in different species.     

Laboratory evaluation of desiccants and insecticidal soap applied to various substrates to control the deer tick Ixodes scapularis

Abstract. Desiccant and soap pest control products were tested against Ixodes scapularis nymphs on sod, pachysandra, landscaping stones and pinebark wood-chips in a laboratory study. High mortality (91–100%) was obtained with the silica-based desiccant Drione and Safer's insecticidal soap (SIS) treatments except for SIS treated woodchips. SIS and Drione contain 0.2 and 1% pyrethrins, respectively. SIS may be absorbed by the woodchips and not picked up by the nymphs as mortality decreased to 78%. Diatomaceous earth and Dri-die reduced nymphs by only 10–41%; neither desiccant contains insecticides. Nymphal mortality increased 15–17% after 20 or 100 ml of water was sprayed over sod plugs treated with SIS or Drione. The addition of isopropyl alcohol (ROH) to SIS increased the efficacy of SIS against nymphal I. scapularis on treated sod plugs but not on treated landscaping substrates. Drione, SIS, SIS-ROH and chlorpyrifos 50WP treated landscaping stones and pinebark woodchips resulted in 88–95% and 72–96% nymphal mortality, respectively. Unexpectedly, these substrates and treatments affected tick movement as well. Effective pest control products applied to xeric landscaping substrates present in maintained beds and borders near wooded areas could deter tick movement and provide significant levels of tick control.     

The Use of Proton Chemical Shifts to Define the Solution Structure of a Dimeric Peptide

For flexible peptides, nuclear Overhauser Effects (NOE) experiments do not provide enough information to ensure a correct definition of their solution structure. The use of distance constraints, derived from the knowledge of proton chemical shifts, is developed to restrict the number of possible conformations. In the case of flexible molecules, randomization appears as an important factor of the correct estimation of the chemical shifts from the 3D structure. The refinement of the solution structure of the highly flexible AVP-like parallel dimer is described to illustrate this process.     

Enhancing native chemical ligation for challenging chemical protein syntheses

Native chemical ligation has enabled the chemical synthesis of proteins for a wide variety of applications (e.g., mirror-image proteins). However, inefficiencies of this chemoselective ligation in the context of large or otherwise challenging protein targets can limit the practical scope of chemical protein synthesis. In this review, we focus on recent developments aimed at enhancing and expanding native chemical ligation for challenging protein syntheses. Chemical auxiliaries, use of selenium chemistry, and templating all enable ligations at otherwise suboptimal junctions. The continuing development of these tools is making the chemical synthesis of large proteins increasingly accessible.     

Registered Pesticides and Citrus Terpenes as Blackbird Repellents for Rice

Abstract: Nonlethal management alternatives are needed to minimize bird depredation of agricultural crops. We conducted 8 caged feeding tests and 2 field studies to evaluate 2 registered fungicides (GWN-4770, Gowan Company, Yuma, AZ; Quadris®, Syngenta Crop Protection, Greensboro, NC), a neem oil insecticide (Aza-Direct®, Gowan Company), and a novel terpene formulation (Gander Gone, Natural Earth Products, Winter Springs, FL) as avian repellents. For all candidate repellents, red-winged blackbirds (Agelaius phoeniceus) discriminated between untreated and treated rice during preference-testing in captivity. We observed a positive concentration-response relationship among birds offered rice treated with 2,500 ppm, 5,000 ppm, 7,500 ppm, 11,000 ppm, or 22,000 ppm GWN-4770. Relative to pretreatment, blackbirds consumed 34% and 77% less rice treated with 11,000 ppm and 22,000 ppm GWN-4770, respectively, during the concentration-response test. Maximum repellency among other tested compounds was <40% during the concentration-response test. Blackbirds consumed 28% of rice seeds treated with 20,000 ppm GWN-4770 and 68% of untreated seeds broadcast within rice fields in southwestern Louisiana, USA. We observed 50% fewer unprotected seedlings than those treated with 10,000 ppm GWN-4770 within a drill-seeded rice field in southeastern Missouri, USA. The manufacturer subsequently applied for a United States patent for the active ingredient of GWN-4770 as an avian repellent. Although additional registration criteria and formulation optimization must be satisfied to enable the commercial availability of GWN-4770 as an avian repellent, additional efficacy studies of GWN-4770 and other promising repellents under extended field conditions are warranted for protection of newly planted and ripening rice.     

Structural Insight into Chromatin Recognition by Multiple Domains of the Tumor Suppressor RBBP1

Retinoblastoma-binding protein 1 (RBBP1) is involved in gene regulation, epigenetic regulation, and disease processes. RBBP1 contains five domains with DNA-binding or histone-binding activities, but how RBBP1 specifically recognizes chromatin is still unknown. An AT-rich interaction domain (ARID) in RBBP1 was proposed to be the key region for DNA-binding and gene suppression. Here, we first determined the solution structure of a tandem PWWP-ARID domain mutant of RBBP1 after deletion of a long flexible acidic loop L12 in the ARID domain. NMR titration results indicated that the ARID domain interacts with DNA with no GC- or AT-rich preference. Surprisingly, we found that the loop L12 binds to the DNA-binding region of the ARID domain as a DNA mimic and inhibits DNA binding. The loop L12 can also bind weakly to the Tudor and chromobarrel domains of RBBP1, but binds more strongly to the DNA-binding region of the histone H2A-H2B heterodimer. Furthermore, both the loop L12 and DNA can enhance the binding of the chromobarrel domain to H3K4me3 and H4K20me3. Based on these results, we propose a model of chromatin recognition by RBBP1, which highlights the unexpected multiple key roles of the disordered acidic loop L12 in the specific binding of RBBP1 to chromatin.