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1.
There are too many kinds of organisms to be able to study and manage each, yet the loss of a single species can sometimes unravel an ecosystem. Such `fusewire species'– critical in the same sense that an electrical fuse can cut out a whole circuit – would be a rewarding focus for research and management effort. However, this approach can only be effective if these `fusewires' represent but a small proportion of the number of species in the system.
To demonstrate methods for measuring what proportion of the species in a system are critical to ecosystem function.
The prevalence of fusewire species was measured in manipulative experiments on an aquatic microcosm.
No single genus deletion caused changes in key characteristics of the system.
Comparison of these results with other published studies shows that the proportion of critical fusewire species varies amongst different ecosystems. The oxidation pond microcosms were shown to contain no single species indispensable to system function. They appear to be ill-suited to a management strategy which focuses on priority eukaryote species. However, a single study provides no evidence that this result is general or even typical of other kinds of ecosystems; it is presented here as an empirical model. Other methods of investigation are available; they are less experimentally rigorous but more practical. These could provide important guidance in planning an approach to management in a particular ecosystem. 相似文献
Aim
To demonstrate methods for measuring what proportion of the species in a system are critical to ecosystem function.
Methods
The prevalence of fusewire species was measured in manipulative experiments on an aquatic microcosm.
Results
No single genus deletion caused changes in key characteristics of the system.
Main conclusions
Comparison of these results with other published studies shows that the proportion of critical fusewire species varies amongst different ecosystems. The oxidation pond microcosms were shown to contain no single species indispensable to system function. They appear to be ill-suited to a management strategy which focuses on priority eukaryote species. However, a single study provides no evidence that this result is general or even typical of other kinds of ecosystems; it is presented here as an empirical model. Other methods of investigation are available; they are less experimentally rigorous but more practical. These could provide important guidance in planning an approach to management in a particular ecosystem. 相似文献
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4.
Nahálka J 《Journal of industrial microbiology & biotechnology》2008,35(4):219-223
Maltodextrin phosphorylase from Pyrococcus furiosus (PF1535) was fused with the cellulose-binding domain of Clostridium cellulovorans serving as an aggregation module. After molecular cloning of the corresponding gene fusion construct and controlled expression
in Escherichia coli BL21, 83% of total maltodextrin phosphorylase activity (0.24 U/mg of dry cell weight) was displayed in active inclusion bodies.
These active inclusion bodies were easily isolated by nonionic detergent treatment and directly used for maltodextrin conversion
to α-d-glucose-1-phosphate in a repetitive batch mode. Only 10% of enzyme activity was lost after ten conversion cycles at optimum
conditions. 相似文献
5.
1. Sedentary grazers can be numerous in fresh waters, despite the constraints on resource availability and the increased predation risk inherent in this lifestyle. The retreats of sedentary grazers have been assumed to provide protection to the resident (a ‘house’), but also may provide additional fertilised food for the grazer (i.e. a ‘garden’). If retreats function as a garden, then they should (i) contain a higher quality and/or quantity of food than the alternative food source. Furthermore, the proportion of retreat‐derived carbon and nitrogen assimilated by the resident should be (ii) related to overall resource availability (more when resources are limited) or (iii) perhaps also to larval density. Alternatively, if retreats provide a less risky food source, then (iv) assimilation of material from the retreat is likely to be greater under conditions in which the risk of emerging from the retreat is high. 2. We tested these four hypotheses for the common and widespread gallery‐building grazing caddisfly Tinodes waeneri. Resource availability, larval density and biomass, and exposure were measured for populations from six lakes of differing productivity in August, October and January. 3. Galleries always contained more algal food than the surrounding epilithon, suggesting that gardening is effective. Furthermore, gallery chlorophyll a content in August, and the disparity in food quality (assessed from the C : N ratio) between gallery and epilithon (quality higher in the former) in October were positively related to the proportion of larval biomass that was derived from the gallery. Larval density and wave exposure parameters were not related to larval assimilation of gallery material. 4. Galleries that are fertilised by the occupant provide more, and sometimes also better quality, food (in terms of the C : N ratio) than is otherwise available. Thus, the gallery plays a substantial role in larval nutrition, and this role is greater at key times of food shortage. 相似文献
6.
Royal jelly: can it reduce physiological strain of growing rabbits under Egyptian summer conditions? 总被引:1,自引:0,他引:1
Elnagar SA Elghalid OA Abd-Elhady AM 《Animal : an international journal of animal bioscience》2010,4(9):1547-1552
Exposure of growing rabbits to heat stress during summer adversely affects their performance leading to major production losses. A total number of 48 rabbits, unsexed V-line weaned rabbits, were randomly divided into four experimental groups, temperature ranged from high at 32°C to low at 23°C. Animals of the 2nd, 3rd and 4th group were individually orally given 200, 400 or 800 mg royal jelly (RJ)/kg BW once a week, respectively, to evaluate RJ ability to reduce physiological strain resulted from heat stress. Weekly BW gain increased by 10.4, 11.8 and 10.8%, and feed conversion ratio was significantly improved by 20, 24 and 18% with RJ treatments. Serum total protein, albumin and globulin increased, whereas serum total lipids, cholesterol and triglycerides decreased with RJ treatments. Creatinine was reduced by 21, 30 and 18% and uric acid by 14, 25 and 18% compared with the heat stressed control with the three doses of RJ. Glucose level increased significantly to reach 116, 125, and 120% of heat stressed control. Calcium, phosphorus and alkaline phosphatase increased significantly with RJ treatments indicating the occurrence of active bone deposition. Thyroid hormone levels increased significantly to reach 108, 111, and 112% of heat stressed control rabbits with the three doses of RJ, counteracting the hypothyroid state resulted from heat stress. It can be concluded that RJ administration to heat stressed growing rabbits can reduce physiological strain resulted from heat stress. 相似文献
7.
Nathachit Limjunyawong Jonathan Fallica Amritha Ramakrishnan Kausik Datta Matthew Gabrielson Maureen Horton Wayne Mitzner 《Journal of visualized experiments : JoVE》2015,(95)
The mouse is now the primary animal used to model a variety of lung diseases. To study the mechanisms that underlie such pathologies, phenotypic methods are needed that can quantify the pathologic changes. Furthermore, to provide translational relevance to the mouse models, such measurements should be tests that can easily be done in both humans and mice. Unfortunately, in the present literature few phenotypic measurements of lung function have direct application to humans. One exception is the diffusing capacity for carbon monoxide, which is a measurement that is routinely done in humans. In the present report, we describe a means to quickly and simply measure this diffusing capacity in mice. The procedure involves brief lung inflation with tracer gases in an anesthetized mouse, followed by a 1 min gas analysis time. We have tested the ability of this method to detect several lung pathologies, including emphysema, fibrosis, acute lung injury, and influenza and fungal lung infections, as well as monitoring lung maturation in young pups. Results show significant decreases in all the lung pathologies, as well as an increase in the diffusing capacity with lung maturation. This measurement of lung diffusing capacity thus provides a pulmonary function test that has broad application with its ability to detect phenotypic structural changes with most of the existing pathologic lung models. 相似文献
8.
1. In the absence of historical water chemistry data, predictive biological indicator groups preserved in lake sediments can be employed to reconstruct the history of lake eutrophication. Diatoms are well established in this role, but to augment diatom‐based inferences of nutrient status we investigate the potential use of chironomid midges (Insecta: Chironomidae). 2. Canonical correspondence analysis (CCA) of modern chironomid assemblages in surface sediments from 44 lakes in the English Midlands and Wales, U.K., shows that five environmental variables (total phosphorus (TP), bottom dissolved oxygen, maximum lake depth, Secchi depth and surface water temperature) make a statistically significant (P < 0.05) contribution to explaining the variance in the chironomid data, of which TP makes the largest contribution (29%). 3. The relationship is used to develop a series of weighted averaging (WA) and partial least squares (PLS), (WA‐PLS) models to infer log10TP. The models are evaluated by leave‐one‐out (jack‐knifing) cross‐validation. The simplest minimal adequate model is provided by WA with unweighted inverse deshrinking of root mean square error of prediction (RMSEPjack=0.34 and r2jack=0.60). 4. Using this model, the trophic history of Betton Pool, Shropshire, U.K., is reconstructed from the mid‐19th century to the present day and the results from the chironomid‐TP model are compared with inferences from a diatom‐TP model ( 13 ). Both reconstructions suggest that there was a gradual rise in TP since 1850 AD until about 1974, followed by a more pronounced and rapid increase that has continued until the present. Inferred TP values from the WA chironomid inference model agree with diatom‐inferred values. 5. The study demonstrates that fossil chironomid assemblages can be used to investigate quantitatively the trophic history of lakes. 相似文献
9.
Many important characteristics of proteins such as biochemical activity and subcellular localization present a challenge to machine-learning methods: it is often difficult to encode the appropriate input features at the residue level for the purpose of making a prediction for the entire protein. The problem is usually that the biophysics of the connection between a machine-learning method's input (sequence feature) and its output (observed phenomenon to be predicted) remains unknown; in other words, we may only know that a certain protein is an enzyme (output) without knowing which region may contain the active site residues (input). The goal then becomes to dissect a protein into a vast set of sequence-derived features and to correlate those features with the desired output. We introduce a framework that begins with a set of global sequence features and then vastly expands the feature space by generically encoding the coexistence of residue-based features. It is this combination of individual features, that is the step from the fractions of serine and buried (input space 20 + 2) to the fraction of buried serine (input space 20 * 2) that implicitly shifts the search space from global feature inputs to features that can capture very local evidence such as a the individual residues of a catalytic triad. The vast feature space created is explored by a genetic algorithm (GA) paired with neural networks and support vector machines. We find that the GA is critical for selecting combinations of features that are neither too general resulting in poor performance, nor too specific, leading to overtraining. The final framework manages to effectively sample a feature space that is far too large for exhaustive enumeration. We demonstrate the power of the concept by applying it to prediction of protein enzymatic activity. 相似文献
10.
《Molecular & cellular proteomics : MCP》2020,19(1):142-154
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- •Flow cytometry analysis is used to isolate ASC speck(+) NPC cells.
- •Proteome analysis of ASC speck(+) NPC cells reveals enriched mitochondrial OxPhos proteins.
- •OxPhos proteins mediate NLRP3 inflammasome activation through mtROS.
- •OxPhos proteins, NDUFB8 and ATP5B are correlated with NPC local recurrence.