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Frequency and recency of infection and their relationship with disgust and contamination sensitivity
Both disgust and contamination sensitivity likely evolved to protect us from infectious disease. Paradoxically, disgust may be reduced by frequent exposure to disgust-inducing cues — cues most likely to occur in disease-rich environments. In this study, we examined whether more frequent or recent illness might act to reverse this process. To test this, we surveyed 616 adults, obtaining illness frequency and recency data, disgust and contamination sensitivity, and a variety of control measures. Heightened contamination sensitivity was associated with more frequent infectious illness, but not with recency of infection. We also found that participants who had heightened contamination sensitivity and who were also more disgust sensitive had significantly fewer recent infections. These findings suggest that frequent illness may up-regulate contamination sensitivity potentially counteracting the effects of exposure on disgust. More importantly, these data provide the first direct evidence of a protective effect of contamination and disgust, against infectious disease. 相似文献
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Michael A Quail Miriam Smith David Jackson Steven Leonard Thomas Skelly Harold P Swerdlow Yong Gu Peter Ellis 《BMC genomics》2014,15(1)
Background
A minor but significant fraction of samples subjected to next-generation sequencing methods are either mixed-up or cross-contaminated. These events can lead to false or inconclusive results. We have therefore developed SASI-Seq; a process whereby a set of uniquely barcoded DNA fragments are added to samples destined for sequencing. From the final sequencing data, one can verify that all the reads derive from the original sample(s) and not from contaminants or other samples.Results
By adding a mixture of three uniquely barcoded amplicons, of different sizes spanning the range of insert sizes one would normally use for Illumina sequencing, at a spike-in level of approximately 0.1%, we demonstrate that these fragments remain intimately associated with the sample. They can be detected following even the tightest size selection regimes or exome enrichment and can report the occurrence of sample mix-ups and cross-contamination.As a consequence of this work, we have designed a set of 384 eleven-base Illumina barcode sequences that are at least 5 changes apart from each other, allowing for single-error correction and very low levels of barcode misallocation due to sequencing error.Conclusion
SASI-Seq is a simple, inexpensive and flexible tool that enables sample assurance, allows deconvolution of sample mix-ups and reports levels of cross-contamination between samples throughout NGS workflows.Electronic supplementary material
The online version of this article (doi:10.1186/1471-2164-15-110) contains supplementary material, which is available to authorized users. 相似文献5.
Gérard PergentCéline Labbe Céline Lafabrie Roger KantinChristine Pergent-Martini 《Ecological Engineering》2011,37(6):999-1002
In coastal environments, plants are used for phytoremediation of contamination. Organic and inorganic contaminants may be due to natural and/or anthropogenic sources. The aim of this study is to compare inorganic (trace metal) and organic (PAH) contamination in Posidonia oceanica and to analyse the relationship between these types of pollutants indeed very few studies have been interested in their correlations and common sources. P. oceanica leaves were collected in two sites exhibiting different levels of human-induced pressure. Higher values were recorded in the more polluted site (Toulon) for trace metals (Ag, Hg, Pb) as well as for PAHs (Medium Molecular Weight and High Molecular Weight) due to the presence of the city and/or harbour in proximity. For the first time in a coastal environment, correlations were observed between metals and PAHs. 相似文献
6.
O. A. Ogunseitan E. T. Tedford D. Pacia K. M. Sirotkin Dr. G. S. Sayler 《Journal of industrial microbiology & biotechnology》1987,1(5):311-317
Summary Bacteria isolated from groundwater aquifer core materials of pristine aquifers at Lula and Pickett, OK, and from a site with a history of aromatic hydrocarbon contamination and natural renovation located at Conroe, TX, were screened for the presence of plasmid DNA by alkaline or enzyme lysis and agarose gel techniques. Some of the isolates were also subjected to taxonomic tests in addition to screening for resistance to antibiotics, tolerance to heavy metal salts, and bacteriocin production. There was no significant difference in the distribution of the traits usually associated with plasmid occurrence in isolates from the three sites. These traits, which occurred at low frequencies, were not restricted to plasmid-bearing strains of the communities. Plasmids were found in isolates from all three sites, but on the average there was a significantly higher percentage of isolates containing plasmids in the samples from Conroe (19.4%) than from either Lula (1.8%) or Pickett (7.7%). The sizes of the plasmids found ranged between 3.5 and 202 kilobases but, for the Conroe samples, many more isolates (67%) contained smaller plasmids (<10 kb) rather than larger ones. No plasmids were found in bacteria recovered from naturally renovated aquifer material at the Conroe site. 相似文献
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肉及肉制品中空肠弯曲菌的污染情况调查 总被引:9,自引:0,他引:9
我们对辽宁地区肉及肉制品进行弯曲杆菌属检查,发现12.9%(23/177)的样品为弯曲杆菌属阳性.经API Campy鉴定系统鉴定,其中26.1%(6/23)为空肠弯曲菌(C.jejuni)阳性,同时发现1株大肠弯曲菌.该调查证实,辽宁地区进出口的肉及肉制品中,存在空肠弯曲菌的污染,如果销售不当或再加工卫生不良,会对消费者的健康构成潜在威胁. 相似文献
8.
The microrelief of plant surfaces, mainly caused by epicuticular wax crystalloids, serves different purposes and often causes
effective water repellency. Furthermore, the adhesion of contaminating particles is reduced. Based on experimental data carried
out on microscopically smooth (Fagus sylvatica L., Gnetum gnemon L., Heliconia densiflora Verlot, Magnolia grandiflora L.) and rough water-repellent plants (Brassica oleracea L., Colocasia esculenta (L.) Schott., Mutisia decurrens Cav., Nelumbo nucifera Gaertn.), it is shown here for the first time that the interdependence between surface roughness, reduced particle adhesion
and water repellency is the keystone in the self-cleaning mechanism of many biological surfaces. The plants were artificially
contaminated with various particles and subsequently subjected to artificial rinsing by sprinkler or fog generator. In the
case of water-repellent leaves, the particles were removed completely by water droplets that rolled off the surfaces independent
of their chemical nature or size. The leaves of N. nucifera afford an impressive demonstration of this effect, which is, therefore, called the “Lotus-Effect” and which may be of great
biological and technological importance.
Received: 19 August 1996 / Accepted: 12 November 1996 相似文献
9.
C.A. Davies D. Brophy T. Jeffries 《Journal of experimental marine biology and ecology》2011,396(2):162-170
Trace element analysis or “elemental fingerprinting” is widely used in stock structure analyses. Postmortem contamination of bony structures can confound the results of microconstituent studies or introduce an additional source of noise to the data, thus reducing the ability of the technique to detect real variation in trace element concentrations. Despite the potential for postmortem contamination during sample preparation, the effectiveness of the procedures used to remove potential contaminants from sectioned otoliths and other calcareous structures prior to laser ablation inductively coupled plasma mass spectrometry (LA ICP-MS) has not previously been addressed. Otoliths and dorsal spine sections of albacore tuna (Thunnus alalunga) collected from the North East Atlantic Ocean and the Mediterranean Sea were deliberately contaminated prior to analysis of trace element composition using LA ICP-MS. The effectiveness of three cleaning treatments (rinsing in ultrapure water, 30% hydrogen peroxide and ultrapure 5% nitric acid) at removing this postmortem contamination were compared. Magnesium and strontium were relatively robust to postmortem effects when exposed to contamination at concentrations of 50 ppm and 200 ppm respectively. Soaking in a solution containing Mn, Cs and Ba (50 ppm) caused a marked increase in the detected concentration of each element in both structures. Translucent bands in both structures were more susceptible to contamination. Rinsing in ultrapure water or hydrogen peroxide was not effective at removing Mn, Cs and Ba contamination from either calcareous structure. Washing the otoliths and spines in nitric acid successfully removed postmortem contaminants.The removal of otoliths from tuna damages the appearance of the fish and has an adverse effect on market value. However spines are easily removed, do not affect the appearance or value of the fish and are the most commonly used structure for age determination. A weak but significant correlation was observed between Ba in opaque zones in otoliths and dorsal spines. All other spine to otolith correlations were not significant. The results do not provide support for the use of spines as an alternative to otoliths in trace elemental analyses. 相似文献
10.
The diversity and distribution of salmonellae in freshwater biofilms were analyzed at a fine scale (i.e. in 20 locations from a 324 cm2 area) for two sites in San Marcos, TX. A concrete storm water overflow channel (City Park) was sampled 4 times and a concrete surface in the spring-fed headwaters of the San Marcos River (Spring Lake) 5 times between April and September 2009, and each biofilm sample analyzed by a combination of traditional enrichment methods and molecular techniques. PCR detection of the invA gene, that encodes a protein of a type III secretion system present in salmonellae, after semi-selective enrichment of salmonellae was achieved in biofilms from all 20 locations at the City Park site, with locations generally being positive 2-3 times out of 4 sampling times for a total of 59% positive samples. InvA gene fragment detection in biofilms was less frequent for the 5 sampling times and 20 locations from the Spring Lake site (18% of all samples), with 1 sampling time being entirely negative and 8 locations remaining negative throughout the study. Rep-PCR fingerprinting of 491 Salmonella isolates obtained from both sites resulted in 30 distinct profiles, with 26 and 7 profiles retrieved from City Park and Spring Lake samples, respectively, and thus with 3 profiles present at both sites, and multiple strains frequently obtained from single locations at both sites. The composition of Salmonella strains in the area analyzed changed in time with large differences between early (April, June) and late sampling times (September) within and among sites, except for one strain (S12) that was present at almost all sampling times at both sites, though often at different locations within the area analyzed. These results demonstrate the presence of salmonellae in natural biofilms and a significant micro-heterogeneity with differences in diversity and persistence of salmonellae. 相似文献