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1.
The endosomal sorting complexes required for transport (ESCRT) pathway drives reverse topology membrane fission events within multiple cellular pathways, including cytokinesis, multivesicular body biogenesis, repair of the plasma membrane, nuclear membrane vesicle formation, and HIV budding. The AAA ATPase Vps4 is recruited to membrane necks shortly before fission, where it catalyzes disassembly of the ESCRT-III lattice. The N-terminal Vps4 microtubule-interacting and trafficking (MIT) domains initially bind the C-terminal MIT-interacting motifs (MIMs) of ESCRT-III subunits, but it is unclear how the enzyme then remodels these substrates in response to ATP hydrolysis. Here, we report quantitative binding studies that demonstrate that residues from helix 5 of the Vps2p subunit of ESCRT-III bind to the central pore of an asymmetric Vps4p hexamer in a manner that is dependent upon the presence of flexible nucleotide analogs that can mimic multiple states in the ATP hydrolysis cycle. We also find that substrate engagement is autoinhibited by the Vps4p MIT domain and that this inhibition is relieved by binding of either Type 1 or Type 2 MIM elements, which bind the Vps4p MIT domain through different interfaces. These observations support the model that Vps4 substrates are initially recruited by an MIM-MIT interaction that activates the Vps4 central pore to engage substrates and generate force, thereby triggering ESCRT-III disassembly.  相似文献   
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During DNA damage response (DDR), histone ubiquitination by RNF168 is a critical event, which orchestrates the recruitment of downstream DDR factors, e.g. BRCA1 and 53BP1. Here, we report USP7 deubiquitinase regulates the stability of RNF168. We showed that USP7 disruption impairs H2A and ultraviolet radiation (UVR)-induced γH2AX monoubiquitination, and decreases the levels of pBmi1, Bmi1, RNF168 and BRCA1. The effect of USP7 disruption was recapitulated by siRNA-mediated USP7 depletion. The USP7 disruption also compromises the formation of UVR-induced foci (UVRIF) and ionizing radiation-induced foci (IRIF) of monoubiquitinated H2A (uH2A) and polyubiquitinated H2AX/A, and subsequently affects UVRIF and IRIF of BRCA1 as well as the IRIF of 53BP1. USP7 was shown to physically bind RNF168 in vitro and in vivo. Overexpression of wild-type USP7, but not its interaction-defective mutant, prevents UVR-induced RNF168 degradation. The USP7 mutant is unable to cleave Ub-conjugates of RNF168 in vivo. Importantly, ectopic expression of RNF168, or both RNF8 and RNF168 together in USP7-disrupted cells, significantly rescue the formation of UVRIF and IRIF of polyubiquitinated H2A and BRCA1. Taken together, these findings reveal an important role of USP7 in regulating ubiquitin-dependent signaling via stabilization of RNF168.  相似文献   
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低剂量杀虫剂对星豹蛛捕食效应的影响及其机理   总被引:3,自引:0,他引:3  
李锐  李娜  刘佳  李生才  洪坚平 《生态学报》2014,34(10):2629-2637
探讨低剂量杀虫剂对蜘蛛捕食效应的影响及其生化机理。采用药膜法,测定了低剂量吡虫啉作用下,星豹蛛和甘蓝蚜敏感性、捕食效应以及成蛛体内乙酰胆碱酯酶(AChE)、谷胱甘肽S-转移酶(GSTs)、超氧化物歧化酶(SOD)、过氧化氢酶(CAT)和中肠蛋白消化酶的活力变化。低剂量农药作用下,星豹蛛对甘蓝蚜的功能反应类型为HollingⅡ型,与对照组相比,随着猎物密度的增大星豹蛛的捕食量增加,寻找效应降低,对猎物的处理时间Th缩短,从而增强了对猎物的捕食作用;低剂量农药处理后,星豹蛛体内AChE和GSTs活性均显著低于对照组(P0.05),说明酶活性受到抑制,且抑制作用随吡虫啉浓度的增大而加强,随作用时间的延长而减弱;SOD,CAT和中肠蛋白消化酶活性显著增强,与对照组相比存在显著或极显著差异(P0.05),且随吡虫啉浓度增大和作用时间的延长而逐渐降低,最后接近对照组。低剂量杀虫剂作用下,蜘蛛体内AChE活性受到抑制,AChE敏感性降低,对神经递质乙酰胆碱的分解作用下降,使蜘蛛的兴奋性增加;GSTs、SOD、CAT等代谢酶活性发生变化,使蜘蛛的新陈代谢加速,从而刺激捕食;中肠蛋白消化酶的活性增强,提高了对猎物的消化吸收功能。总之,在低剂量杀虫剂作用下,星豹蛛通过外在的捕食行为和体内一系列酶系生理生化反应的综合作用促进蜘蛛对害虫的控制作用。  相似文献   
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In situ digestion of metaphase and polytene chromosomes and of interphase nuclei in different cell types ofDrosophila nasuta with restriction enzymes revealed that enzymes like AluI, EcoRI, HaeIII, Sau3a and SinI did not affect Giemsa-stainability of heterochromatin while that of euchromatin was significantly reduced; TaqI and SalI digested both heterochromatin and euchromatin in mitotic chromosomes. Digestion of genomic DNA with AluI, EcoRI, HaeIII, Sau3a and KpnI left a 23 kb DNA band undigested in agarose gels while withTaqI, no such undigested band was seen. TheAluI resistant 23 kb DNA hybridized insitu specifically with the heterochromatic chromocentre. It appears that the digestibility of heterochromatin region in genome ofDrosophila nasuta with the tested restriction enzymes is dependent on the availability of their recognition sites.  相似文献   
7.
Temperature, activating metal ions, and amino-acid substitutions are known to influence the CO2/O2 specificity of the chloroplast enzyme ribulose-1,5-bisphosphate carboxylase/oxygenase. However, an understanding of the physical basis for enzyme specificity has been elusive. We have shown that the temperature dependence of CO2/O2 specificity can be attributed to a difference between the free energies of activation for the carboxylation and oxygenation partial reactions. The reaction between the 2,3-enediolate of ribulose 1,5-bisphosphate and O2 has a higher free energy of activation than the corresponding reaction of this substrate with CO2. Thus, oxygenation is more responsive to temperature than carboxylation. We have proposed possible transition-state structures for the carboxylation and oxygenation partial reactions based upon the chemical natures of these two reactions within the active site. Electrostatic forces that stabilize the transition state of the carboxylation reaction will also inevitably stabilize the transition state of the oxygenation reaction, indicating that oxygenase activity may be unavoidable. Furthermore, the reduction in CO2/O2 specificity that is observed when activator Mg2+ is replaced by Mn2+ may be due to Mg2+ being more effective in neutralizing the negative charge of the carboxylation transition state, whereas Mn2+ is a transition-metal ion that can overcome the triplet character of O2 to promote the oxygenation reaction.Abbreviations CABP 2-carboxyarabinitol 1,5-bisphosphate - enol-RuBP 2,3-enediolate of ribulose 1,5-bisphosphate - Kc Kmfor CO2 - Ko Kmfor O2 - Rubisco ribulose-1,5-bisphosphate carboxylase/oxygenase - RuBP ribulose 1,5-bisphosphate - Vc V max for carboxylation - Vo V max for oxygenation  相似文献   
8.
The rice blast disease caused by the fungus Magnaporthe grisea is one of the most devastating rice diseases, but there is no effective fungicide toward chitinase which is a key enzyme of M. grisea. In this study, we observed that distortion and cell-wall damage of M. grisea hyphae were significantly under the scanning electron micrograph after a 24-h treatment with 10?mg/L isobavachalcone (IBC) extracted from Psoralea corylifolia L. To further explore the effect of IBC on the cell wall of M. grisea, we examined changes in enzymes associated with cell wall degradation by enzyme activity experiments, treated liquid culture mycelia with 10?mg/L IBC for 1?h. Results displayed that chitinase was obviously more active than control group. To illustrate the interactions between IBC and chitinase, the studies of homology modeling and molecular docking were carried out successively. The results revealed that IBC had hydrogen bonds with residues ASP267 and ARG276 of chitinase. Besides, these nonpolar residues TYR270, PRO271, VAL272, LEU310, PRO311, TYR316, and LEU317 were able to form strong hydrophobic interactions. Binding energies of the chitinase-IBC complexes were calculated by MM-GBSA showed that the ΔGbind score of molecular dynamics had lower binding energy and more stable than docking complexes. All above, IBC owns significant agonistic activity in chitinase and would be a potent fungicide to inhibit the growth of M. grisea. We hope the above information provides an important insight for understanding the interactions between IBC and chitinase, which may be useful in the discovery of a novel potent agonist.

Communicated by Ramaswamy H. Sarma  相似文献   

9.
Human MICAL1 is a member of a recently discovered family of multidomain proteins that couple a FAD‐containing monooxygenase‐like domain to typical protein interaction domains. Growing evidence implicates the NADPH oxidase reaction catalyzed by the flavoprotein domain in generation of hydrogen peroxide as a second messenger in an increasing number of cell types and as a specific modulator of actin filaments stability. Several proteins of the Rab families of small GTPases are emerging as regulators of MICAL activity by binding to its C‐terminal helical domain presumably shifting the equilibrium from the free – auto‐inhibited – conformation to the active one. We here extend the characterization of the MICAL1–Rab8 interaction and show that indeed Rab8, in the active GTP‐bound state, stabilizes the active MICAL1 conformation causing a specific four‐fold increase of kcat of the NADPH oxidase reaction. Kinetic data and small‐angle X‐ray scattering (SAXS) measurements support the formation of a 1:1 complex between full‐length MICAL1 and Rab8 with an apparent dissociation constant of approximately 8 μM. This finding supports the hypothesis that Rab8 is a physiological regulator of MICAL1 activity and shows how the protein region preceding the C‐terminal Rab‐binding domain may mask one of the Rab‐binding sites detected with the isolated C‐terminal fragment. SAXS‐based modeling allowed us to propose the first model of the free full‐length MICAL1, which is consistent with an auto‐inhibited conformation in which the C‐terminal region prevents catalysis by interfering with the conformational changes that are predicted to occur during the catalytic cycle.  相似文献   
10.
中亚热带不同母质和森林类型土壤生态酶化学计量特征   总被引:6,自引:0,他引:6  
土壤生态酶化学计量比作为衡量土壤微生物能量和养分资源限制状况的重要指标,是当前生态学领域研究的热点之一,然而关于土壤母质和森林类型在调控土壤生态酶化学计量比中所扮演的角色及作用机制尚不明确。分别以砂岩和花岗岩发育的米槠林和杉木林土壤为研究对象,通过测定土壤物理化学性质、微生物量碳、氮和磷及土壤酶活性,探讨不同母岩发育的米槠林和杉木林土壤生态酶化学计量特征。结果显示,花岗岩发育的土壤酸性磷酸酶活性(AP)显著高于砂岩发育的土壤,βG:AP和NAG:AP的值显著低于砂岩发育的土壤。其中,花岗岩发育的米槠林土壤βG:AP和NAG:AP的值都显著高于杉木林,砂岩发育的土壤βG:AP和NAG:AP的值在两个林分间呈相反的结果。结果表明土壤生态酶化学计量比能够反映不同森林土壤之间磷养分限制强度,花岗岩比砂岩土壤受磷养分限制更严重。相关分析表明,土壤酶活性及生态酶化学计量比与土壤生物因子和非生物因子密切相关,而冗余分析发现土壤pH、总磷(TP)和微生物量碳(MBC)分别解释土壤酶活性和生态酶化学计量比变异的56.9%、27.9%和12.3%。未来森林经营及管理应考虑土壤母质和森林类型差异对区域森林土壤养分循环的影响。  相似文献   
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