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1.
In order to ensure the ecological safety in river beds, each project affecting it must be subjected to an evaluation in terms of its implementation results on the river habitats. Technical activities in the river beds can cause irreversible changes in their biocenosis. However, due to the lack of a method that allows us to predict these changes, the decisions made by designers and contractors can be evaluated only after completing the investment. Therefore, it is necessary to elaborate a method to evaluate the environmental safety in regulated and maintenanced rivers. This article presents a model that allows us to predict the changes in vascular aquatic plant communities, which result from technical interference in the river bed. The model was elaborated based on the results of the study performed in 2007–2011 in natural and transformed lowland watercourses from Lower Silesia area (Poland). It takes into account the elements of the watercourse bed ecosystem, which significantly affect the magnitude of the changes in plant communities. Based on this model, it is possible to evaluate the level of ecological risk associated with the execution of maintenance and regulatory works. 相似文献
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D. Bonarska-Kujawa H. Pruchnik S. Cyboran R. Żyłka J. Oszmiański H. Kleszczyńska 《The Journal of membrane biology》2014,247(7):611-625
The aim of the present research was to determine the effect of blue honeysuckle fruit and leaf extracts components on the physical properties of erythrocyte and lipid membranes and assess their antioxidant properties. The HPLC analysis showed that the extracts are rich in polyphenol anthocyanins in fruits and flavonoids in leaves. The results indicate that both extracts have antioxidant activity and protect the red blood cell membrane against oxidation induced by UVC irradiation and AAPH. The extracts do not induce hemolysis and slightly increase osmotic resistance of erythrocytes. The research showed that extracts components are incorporated mainly in the external part of the erythrocyte membrane, inducing the formation of echinocytes. The values of generalized polarization and fluorescence anisotropy indicate that the extracts polyphenols alter the packing arrangement of the hydrophilic part of the erythrocyte and lipid membranes, without changing the fluidity of the hydrophobic part. The DSC results also show that the extract components do not change the main phase transition temperature of DPPC membrane. Studies of electric parameters of membranes modified by the extracts showed that they slightly stabilize lipid membranes and do not reduce their specific resistance or capacity. Examination of IR spectra indicates small changes in the degree of hydration in the hydrophilic region of liposomes under the action of the extracts. The location of polyphenolic compounds in the hydrophilic part of the membrane seems to constitute a protective shield of the cell against other substances, the reactive forms of oxygen in particular. 相似文献
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Rafał Donczew Thorsten Mielke Paweł Jaworski Jolanta Zakrzewska-Czerwińska Anna Zawilak-Pawlik 《Journal of molecular biology》2014
In bacteria, chromosome replication is initiated by binding of the DnaA initiator protein to DnaA boxes located in the origin of chromosomal replication (oriC). This leads to DNA helix opening within the DNA-unwinding element. Helicobacter pylori oriC, the first bipartite origin identified in Gram-negative bacteria, contains two subregions, oriC1 and oriC2, flanking the dnaA gene. The DNA-unwinding element region is localized in the oriC2 subregion downstream of dnaA. Surprisingly, oriC2–DnaA interactions were shown to depend on DNA topology, which is unusual in bacteria but is similar to initiator–origin interactions observed in higher organisms. In this work, we identified three DnaA boxes in the oriC2 subregion, two of which were bound only as supercoiled DNA. We found that all three DnaA boxes play important roles in orisome assembly and subsequent DNA unwinding, but different functions can be assigned to individual boxes. This suggests that the H. pylori oriC may be functionally divided, similar to what was described recently for Escherichia coli oriC. On the basis of these results, we propose a model of initiation complex formation in H. pylori. 相似文献
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Małgorzata Wnętrzak Paweł Błażej Dorota Mackiewicz Paweł Mackiewicz 《BMC evolutionary biology》2018,18(1):192
Background
The standard genetic code (SGC) is a unique set of rules which assign amino acids to codons. Similar amino acids tend to have similar codons indicating that the code evolved to minimize the costs of amino acid replacements in proteins, caused by mutations or translational errors. However, if such optimization in fact occurred, many different properties of amino acids must have been taken into account during the code evolution. Therefore, this problem can be reformulated as a multi-objective optimization task, in which the selection constraints are represented by measures based on various amino acid properties.Results
To study the optimality of the SGC we applied a multi-objective evolutionary algorithm and we used the representatives of eight clusters, which grouped over 500 indices describing various physicochemical properties of amino acids. Thanks to that we avoided an arbitrary choice of amino acid features as optimization criteria. As a consequence, we were able to conduct a more general study on the properties of the SGC than the ones presented so far in other papers on this topic. We considered two models of the genetic code, one preserving the characteristic codon blocks structure of the SGC and the other without this restriction. The results revealed that the SGC could be significantly improved in terms of error minimization, hereby it is not fully optimized. Its structure differs significantly from the structure of the codes optimized to minimize the costs of amino acid replacements. On the other hand, using newly defined quality measures that placed the SGC in the global space of theoretical genetic codes, we showed that the SGC is definitely closer to the codes that minimize the costs of amino acids replacements than those maximizing them.Conclusions
The standard genetic code represents most likely only partially optimized systems, which emerged under the influence of many different factors. Our findings can be useful to researchers involved in modifying the genetic code of the living organisms and designing artificial ones.6.
N‐terminal guanidinylation of the cyclic 1,4‐ureido‐deltorphin analogues: the synthesis,receptor binding studies,and resistance to proteolytic digestion 下载免费PDF全文
Krzysztof Bańkowski Olga M. Michalak Anna Leśniak Katarzyna E. Filip Piotr Cmoch Zbigniew Szewczuk Piotr Stefanowicz Jan Izdebski 《Journal of peptide science》2015,21(6):467-475
The synthesis of a series of N‐guanidinylated cyclic ureidopeptides, analogues of 1,4‐ureido‐deltorphin/dermorphine tetrapeptide is described. The δ‐ and μ‐opioid receptor affinity of new guanidinylated analogues and their non‐guanidinylated precursors was determined by the displacement radioligand binding experiments. Our results indicate that the guanidinylation of cyclic 1,4‐ureidodeltorphin peptide analogues does not exhibit a uniform influence on the opioid receptor binding properties, similarly as reported earlier for some linear peptides. All analogues were also tested for their in vitro resistance to proteolysis during incubation with large excess of chymotrypsin, pepsin, and papain by means of mass spectroscopy. Guanidinylated ureidopeptides 1G–4G showed mixed μ agonist/δ agonist properties and high enzymatic stability indicating their potential as therapeutic agents for treatment of pain. Copyright © 2015 European Peptide Society and John Wiley & Sons, Ltd. 相似文献
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A colostral proline-rich polypeptide complex (PRP) consisting of over 30 peptides shows beneficial effects in Alzheimer’s disease (AD) patients when administered in the form of sublinqual tablets called Colostrinin. The aim of the present studies was to investigate whether nanopeptide fragment of PRP (NP) - one of the PRP complex components can affect aggregation of amyloid β (Aβ1-42). The effect of NP on Aβ aggregation was studied using Thioflavin T (ThT) binding, atomic force microscopy, and analyzing circular dichroism spectra. Results presented suggest that NP can directly interact with amyloid beta, inhibit its aggregation and disrupt existing aggregates acting as a β sheet breaker and reduce toxicity induced by aggregated forms of Aβ. 相似文献
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Aleksandra Samecka-Cymerman Krzysztof Kolon Andrzej Stankiewicz Joanna Kaszewska Lucyna Mróz Alexander J. Kempers 《Ecological Indicators》2011,11(5):1105-1111
Concentrations of P, K, Ca, Mg, Al, Cd, Co, Cr, Cu, Fe, Mn, Ni, Pb, V and Zn were measured in rhizomes and fronds of the fern Athyrium filix-femina in relation to the concentrations of the same elements in soils developed on various parent rocks in the Góry Kaczawskie mountains (southwest Poland). This species was sampled from sites on greenstone, sandstone, metadiabase, crystalline limestone, rhyolite, metamudstone, mica and sericite schists and quartzite to verify the hypothesis that the elemental composition of A. filix-femina is different on each type of parent rock. We verified this hypothesis utilising the neural network method (SOFM). The self organising feature map (SOFM) was used to classify parent rock, soil, rhizomes and fronds of A. filix-femina based on the concentrations of elements. Elevated concentrations of elements accumulated in A. filix-femina were influenced by the geochemistry of different parent rock types on which this species grew indicating the bio indicative potential of this plant. SOFM was able to distinguish all types of parent rock based on the chemical composition of A. filix-femina. Therefore SOFM could be a future tool in recognising the type of plant substrate in the Góry Kaczawskie mountains by analysing the concentrations of elements in this species. 相似文献
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It is commonly assumed that transformations of endosymbionts into organelles are exceptionally rare evolutionary events because of hypothetical difficulties in the origin of an import apparatus for nuclear-encoded, organelle-targeted proteins along with their targeting signals. A challenge to this view comes from recent studies of protein import into the cyanobacterial endosymbionts/organelles of Paulinella chromatophora. 相似文献