Structural properties of scaffolds: Crucial parameters towards stem cells differentiation

Tissue engineering is a multidisciplinary field that applies the principles of engineering and life-sciences for regeneration of damaged tissues. Stem cells have attracted much interest in tissue engineering as a cell source due to their ability to proliferate in an undifferentiated state for prolonged time and capability of differentiating to different cell types after induction. Scaffolds play an important role in tissue engineering as a substrate that can mimic the native extracellular matrix and the properties of scaffolds have been shown to affect the cell behavior such as the cell attachment, proliferation and differentiation. Here, we focus on the recent reports that investigated the various aspects of scaffolds including the materials used for scaffold fabrication, surface modification of scaffolds, topography and mechanical properties of scaffolds towards stem cells differentiation effect. We will present a more detailed overview on the effect of mechanical properties of scaffolds on stem cells fate.     

Formation and maintenance of community boundaries in a sub‐alpine forest landscape in northern Japan

Abstract. We focused on community boundaries in a sub‐alpine forest landscape in the Shiretoko Peninsula, northern Japan. Gradient‐directed transects were conducted on the northwestern slope (ranging 500–600 m a.s.l.) of Mount On'nebetsu (1331 m), where complex topography was formed by past landslides. Pioneer Picea glehnii made up a mosaic of pure stands related to landslides. Structural and compositional changes from P. glehnii pure stands to P. glehnii and Abies sachalinensis mixed stands were characterized by ca. 20 m transitional zones over the landscape. Stand density of the species changed across boundaries. A. sachalinensis preferred less undulated slopes with deep soil and P. glehnii preferred undulated rocky sites. Positive spatial associations between overstorey‐understorey P. glehnii were found at undulated core parts of P. glehnii pure stands. Short‐lived A. sachalinensis grew faster to the smaller maximum size than long‐lived P. glehnii. Undulated topography controlled the increase of A. sachalinensis and provided regeneration sites for P. glehnii, which prevented the general trend of canopy replacement from P. glehnii to late‐successional A. sachalinensis. However, the locations of current boundaries were not accordant with the topographic changes in the meso‐scale landscape. Initial P. glehnii pure stands would extend to larger areas if current patterns reflect vegetation recovery since the last landslide. P. glehnii pure stands with accurate boundaries were not maintained by topographic complexity, but were dynamically arranged by the one‐sided canopy replacements from P. glehnii to A. sachalinensis at less undulated slopes in the sub‐alpine forest landscape.     

Plant communities of New Brunswick in relation to environmental variation

Abstract. The objective of this study was to quantitatively describe vegetation-environment relationships at a regional scale within the Province of New Brunswick, Canada, using vegetation and environment data from 3947 provincial forestry sample plots. The major plant community types in the province were identified using cluster analysis. Relationships of these communities to climate, topography and soil variables were analyzed by Canonical Correspondence Analysis (CCA), using both a reduced data set consisting of cluster likelihood scores × sample plots and an unreduced species × sample plots data matrix. The vegetation types and major axes of environmental variation were mapped to examine the geographic distributions of these factors within the province. Eight communities were identified and described in terms of enhanced/reduced species (significantly higher or lower frequencies of occurrence in a specific community type relative to all plots) and common species (species in the community type with the highest frequencies of occurrence). The canonical axes explained 25 % of the variation in the vegetation cluster data. Vegetation composition was related to three major environmental gradients representing climate and elevation, soil moisture, and soil fertility. The geographic distributions of vegetation communities exhibited predictable but weak correspondence to the geographic distributions of individual environmental factors. Our findings emphasize the overriding importance of climate and topography and the secondary importance of soil factors in controlling vegetation pattern at the regional scale.     

Survival of juvenile Ecklonia radiata sporophytes after canopy loss

The understorey beneath a canopy of the kelp Ecklonia radiata often contains juvenile sporophytes of the same species. When canopy disturbance occurs, these juvenile sporophytes are exposed to new environmental conditions. If these juvenile sporophytes survive these new conditions, then they become a ready source of kelps to rapidly form a new canopy. This study investigated the potential of pre-existing juvenile sporophytes of E. radiata to survive post-disturbance conditions and contribute to the rapid formation of a new canopy. The potential of canopy recovery by recruitment of kelp from zoospores was also investigated. These processes were studied at different times during the summer and on reefs ranging in topographic complexity from simple, flat reefs to highly complex, rugose reefs. By tagging juvenile sporophytes after the adult kelp canopy was removed and monitoring them through time, it was demonstrated that most juveniles (> 50%) survived the change in conditions after canopy loss, with some juveniles going on to become members of a new canopy. Approximately 6-47% of tagged sporophytes died within 3-4 days after canopy removal possibly due to excessive photoinhibition and photostress as demonstrated by changes in photosynthetic performance (decreased alpha values) of juveniles. The potential contribution of juvenile sporophytes to the rapid formation of a new canopy appears to be dependent on the timing of canopy removal with late summer-autumn canopy loss favouring faster recovery. Topographically complex reefs had less short-term (7 days) survival of juvenile sporophytes than topographically simple reefs; however this difference was not carried through to the long-term (6 months) abundance of adult kelp in experimental clearings, which was greater on topographically complex reefs. Clearly, juvenile sporophytes in arrested development under existing canopies of the small kelp E. radiata are important for the rapid recovery of the kelp canopy once adults are lost through physical disturbance.     

Maps of space in human frontoparietal cortex

Prefrontal cortex (PFC) and posterior parietal cortex (PPC) are neural substrates for spatial cognition. We here review studies in which we tested the hypothesis that human frontoparietal cortex may function as a priority map. According to priority map theory, objects or locations in the visual world are represented by neural activity that is proportional to their attentional priority. Using functional magnetic resonance imaging (fMRI), we first identified topographic maps in PFC and PPC as candidate priority maps of space. We then measured fMRI activity in candidate priority maps during the delay periods of a covert attention task, a spatial working memory task, and a motor planning task to test whether the activity depended on the particular spatial cognition. Our hypothesis was that some, but not all, candidate priority maps in PFC and PPC would be agnostic with regard to what was being prioritized, in that their activity would reflect the location in space across tasks rather than a particular kind of spatial cognition (e.g., covert attention). To test whether patterns of delay period activity were interchangeable during the spatial cognitive tasks, we used multivariate classifiers. We found that decoders trained to predict the locations on one task (e.g., working memory) cross-predicted the locations on the other tasks (e.g., covert attention and motor planning) in superior precentral sulcus (sPCS) and in a region of intraparietal sulcus (IPS2), suggesting that these patterns of maintenance activity may be interchangeable across the tasks. Such properties make sPCS in frontal cortex and IPS2 in parietal cortex viable priority map candidates, and suggest that these areas may be the human homologs of the monkey frontal eye field (FEF) and lateral intraparietal area (LIP).     

Trends and fluctuations in species abundance and richness in Mediterranean annual pastures

Abstract. Floristic data collected from permanent plots during 14 consecutive years are used to model the frequency of the 62 most abundant species in relation to post-ploughing succession, topography and rainfall in annual Mediterranean grasslands located in a Quercus rotundifolia dehesa. The interannual dynamics of species richness are also analysed. From 1980 to 1993, presence/absence data of grassland species were noted in five 20 cm X 20 cm permanent quadrats placed at random in 1980 in 14 permanent plots on a south-facing slope along the topographic gradient. Weekly autumn rainfall data over the 14 years were analysed using a profile attributes index and Hybrid Multidimensional Scaling to arrange the years according to their autumn rainfall pattern. Generalized Linear Models were used to fit the species richness and species frequency according to topographic position, age since the last ploughing episode, total rainfall in the growing season and autumn rainfall pattern using a forward stepwise procedure. The richness model includes all of these variables, and reveals a relatively high goodness-of-fit (71 %). The fact that the meteorological factors play a key role in modelling richness forces us to include them if we wish to use richness as an indicator of the degree of disturbance in these highly fluctuating annual pastures. Models of species dynamics show that although roughly 33 % of the species have a successional behaviour, the majority are more dependent on temporal heterogeneity associated with rainfall or spatial heterogeneity linked to the topographic gradient.     

Vectorial electron transport in Degulfovibrio vulgaris (Marburg) growing on hydrogen plus sulfate as sole energy source

Desulfovibrio vulgaris (Marburg) was grown on hydrogen plus sulfate as sole energy source in a medium containing excess iron. The topography of electron transport components was investigated. The bacterium contained per mg cells (dry weight) 30U hydrogenase (1U=1 mol/min), 35 g desulfoviridin (= bisulfite reductase), 0.6 U adenosine phosphosulfate reductase, 30 mU thiosulfate reductase, 0.3 nmol cytochrome c ₃ (M _r=13,000), 0.04 nmol cytochrome b, 0.85 nmol menaquinone, and 0.4 nmol ferredoxin. Hydrogenase (>95%) and cytochrome c ₃ (82%) were localized on the periplasmic side and desulfoviridin (95%), adenosine phosphosulfate reductase (87%), thiosulfate reductase (74%), and ferredoxin (71%) on the cytoplasmic side of the cytoplasmic membrane; menaquinone and cytochrome b were exlusively found in the membrane fraction. The location of the oxidoreductases indicate that in D. vulgaris (Marburg) H₂ oxidation and sulfate reduction take place on opposite sides of the cytoplasmic membrane rather than on the same side, as has recently been proposed.     

Contact guidance of smooth muscle cells is associated with tension-mediated adhesion maturation

Contact guidance is a cellular phenomenon observed during wound healing and developmental patterning, in which adherent cells align in the same direction due to physical cues. Despite numerous studies, the molecular mechanism underlying the consistent cell orientation is poorly understood. Here we fabricated microgrooves with a pitch of submicrons to study contact guidance of smooth muscle cells. We show that both integrin-based cell–substrate adhesions and cellular tension are necessary to achieve contact guidance along microgrooves. We further show through analyses on paxillin that cell–substrate adhesions are more prone to become mature when they run along microgrooves than align at an angle to the direction of microgrooves. Because cellular tension promotes the maturation of cell–substrate adhesions, we propose that the adhesions aligning across microgrooves are not physically efficient for bearing cellular tension compared to those aligning along microgrooves. Thus, the proposed model describes a mechanism of contact guidance that cells would finally align preferentially along microgrooves because cellular tensions are more easily borne within the direction, and the direction of resulting mature adhesions determines the direction of the whole cells.     

Development of vegetation patterns in early primary succession

Question: We investigated colonisation filters in early plant community development on a glacial outwash plain. We asked if these were related to seed limitation or to a lack of safe sites, if topographical heterogeneity affected species patchiness and how species life cycles influence successional trajectories. Location: An outwash plain (Skeiðarársandur) in southeast Iceland. Methods: We identified surface heterogeneity at two different scales, ca. 10–15 cm (larger stones and established plants) and ca. 50 m (shallow depressions representing dry river beds) at two study sites. We quantified species cover, flowering plant density, seed production, seed rain, seed bank density, seedling emergence and seedling survival from June 2005 to June 2007 for the whole plant community, and measured seed production for five species. Results: Mean vegetation cover was <2.5% at the sites. Low emergence rates and high seedling mortality were the two main recruitment filters. Only 1.4% of seedlings emerging in 2005 survived into the 2007 growing season. Topographical heterogeneity had little effect on plant colonisation. High annual variation was recorded, and the two study sites (ca. 2 km apart) differed in their colonisation success. Of the five species, establishment of Cerastium alpinum and Silene uniflora was most limited by lack of seeds, whereas establishment of Luzula spicata, Poa glauca and Rumex acetosella was most limited by safe sites. Conclusions: We conclude that colonisation processes and patterns in early primary succession on Skeiðarársandur were largely influenced by stochastic factors.     

Sediment porewater salinity, inundation frequency and mangrove vegetation height in Bragança, North Brazil: an ecohydrology-based empirical model

An empirical model based on an ecohydrological approach was developed, which allows the integration of hydrographical, topographical and physicochemical information with vegetation characteristics of mangroves and marshes of the Bragança Peninsula, North Brazil. A synoptic distribution of sediment porewater salinity was produced with isolines derived from predicted porewater salinity values from a GIS-based, multiple regression model. It includes a non-linear function of calculated inundation frequencies, the measured salinity distribution in the adjacent estuaries and sediment porewater salinities determined in the dry season. An excellent fit between measured and predicted porewater salinities was obtained. Highly significant correlations were found between vegetation height, inundation frequency and predicted porewater salinities. The relationship between vegetation height and predicted porewater salinities indicated the existence of at least three data ‘clusters’, which probably respond to different height to diameter-in-breast-height proportions according to age and environmental stress conditions. The porewater salinities produced by the model proved to be a solid proxy for the average stress situation of mangrove vegetation. The model offers good potential as a tool for analysing wetland dynamics, particularly at a synoptic, basin level.