A null model of guild proportionality,applied to stratification of a New Zealand temperate rain forest

Summary Much ecological theory assumes that the number of species that can coexist (by species packing) is limited, because competitive exclusion occurs when any pair of species within a guild is too similar — species saturation or niche limitation. If such niche limitation occurs, the proportion of species in each guild should be relatively constant — guild proportionality. This concept is applied to the guilds represented by strata in a forest. A method is produced, and used to examine a New Zealand temperate rain forest. Most strata showed no deviation from a null model of no niche limitation, i.e. no tendency to guild proportionality. The proportion of lianes was more variable than in the null model, tending to be inversely related to the proportion of epiphytes, Canopy tree proportion was significantly more constant than in the null model, but this could be interpreted as a limit caused by the size of a canopy tree individual.     

Resource utilization of sympatric and experimentally allopatric cutthroat trout and Dolly Varden charr

Summary Resource utilization by cutthroat trout (CT) and Dolly Varden charr (DV) was studied 8 years after experimental transfers from sympatry had established reproducing allopatric populations in two nearby fishless lakes. Allopatric DV significantly increased their utilization of shallow-dwelling zoobenthos, and increased their vertical distribution in comparison to that in sympatry. In contrast, allopatric CT showed little change in the proportions of major prey types utilized, and, if anything, restricted their vertical distribution in comparison to that in sympatry. The results can be explained by the hypothesis that the resource use of DV is strongly influenced by interspecific competition from CT, whereas CT largely remains unaffected by this interaction. An alternative hypothesis, that lake differences can explain the differences in resource use between sympatry and allopatry, was evaluated by comparing food resource availability and other biotic and abiotic characteristics of the three study lakes. None of these could account for the shift in resource use by DV between sympatry and allopatry, but lake differences may explain why allopatric CT showed a restricted habitat use in comparison with their sympatric donor stock. The results of this whole-lake transfer experiment are consistent with earlier reported field and laboratory studies, and suggest that the aggressive dominance of CT is the most important mechanism by which DV are displaced from littoral and near-surface habitats in sympathy with CT.     

Effects of exotic-native species relationship on naturalization and invasion of exotic plant species北大核心CSCD

Aims: Darwin's naturalization conundrum describes the paradox that the relationship of exotic species to native residents could either promote or hinder invasion success through opposing mechanisms: niche pre-adaptation or competitive interactions. Previous Darwin's naturalization studies have showed invasion success could vary at stages, sites, and spatial and phylogenetic scales. Our objective was to assess the effects of exotic-native species relationship on invasion process of exotic plant species in China, where related research is still lacking. Methods: Generalized linear mixed models were used to examine relationship between exotic-native species relationship and performance of exotic species at different spatial scale (provincial, municipal and community) and invasion stages (naturalization, dispersal and invasion). At community scale, we measured environmental factors of communities we investigated to control the effect of habitat heterogeneity among them. Important findings: At the provincial and municipal scales, exotic species closely related to native flora were more likely to be naturalized and distributed, which is more consistent with the expectation of the pre-adaptation hypothesis. On the community scale, the exotic-native species relationship was not related to establishment and abundance of exotic species in the community. The results suggested that exotic species did not strongly compete with their close native relatives in communities, but were better adapted to areas where their close relatives had lived. Considering their high potential of naturalization and invasion, special attention should be paid to those exotic species that closely related to the native flora in the management of invasive species. © Editorial Office of Chinese Journal of Plant Ecology. All rights reserved.     

Next generation organoids for biomedical research and applications

Organoids are in vitro cultures of miniature fetal or adult organ-like structures. Their potentials for use in tissue and organ replacement, disease modeling, toxicology studies, and drug discovery are tremendous. Currently, major challenges facing human organoid technology include (i) improving the range of cellular heterogeneity for a particular organoid system, (ii) mimicking the native micro- and matrix-environment encountered by cells within organoids, and (iii) developing robust protocols for the in vitro maturation of organoids that remain mostly fetal-like in cultures. To tackle these challenges, we advocate the principle of reverse engineering that replicates the inner workings of in vivo systems with the goal of achieving functionality and maturation of the resulting organoid structures with the input of minimal intrinsic (cellular) and environmental (matrix and niche) constituents. Here, we present an overview of organoid technology development in several systems that employ cell materials derived from fetal and adult tissues and pluripotent stem cell cultures. We focus on key studies that exploit the self-organizing property of embryonic progenitors and the role of designer matrices and cell-free scaffolds in assisting organoid formation. We further explore the relationship between adult stem cells, niche factors, and other current developments that aim to enhance robust organoid maturation. From these works, we propose a standardized pipeline for the development of future protocols that would help generate more physiologically relevant human organoids for various biomedical applications.     

Simple assumptions predicts prey selection by piscivorous fishes

Studies on trophic interactions permits the use of community-wide network analyses to evaluate the consequences of human interventions in natural communities. In this paper, we aimed to get insights into the underlying mechanism of prey selection for four piscivorous species, and evaluate behavioral responses to prey selection after an impoundment. We assemble six food web models to search for the hypothesis that best predict observed prey selection pattern of piscivorous fishes combining the following assumptions: (i) predation window, defined as the size range of prey species consumed by a piscivorous fish; (ii) prey strategies to avoid predation (iii) and prey abundance. We tested the probability of each hypothesis to reproduce two empirical data, one before and one after an impoundment with minimum assumptions. Before impoundment, we found that predators presented switching behavior, preying preferably on abundant prey; while after impoundment, predators consumed prey within its predation window. Those results explained better than the null hypotesis and all other assumptions; and corroborate with both theoretical and empirical studies. We conclude that different assumptions drives piscivorous fish behavior in different environments; and modelling procedures can be used to assess gaps in trophic interactions of fish communities.