北京市平原区土壤有机碳垂直分布特征

研究土壤有机碳垂直分布特征规律对精确测算土壤有机碳储量具有重要意义。通过野外调查实地挖取北京市平原区40个典型土壤剖面共169个样品数据,研究土壤有机碳垂直分布特征。结果表明:1)北京市平原区0—150 cm土壤平均有机碳含量为(5.98±2.62) g/kg,垂直分布上,随剖面深度增加土壤有机碳含量逐渐降低,且在浅层(≤60 cm)下降速度显著快于深层(60 cm); 2)各发生层次不同土壤质地的有机碳含量差异整体上均表现为粉粒及黏粒含量比例越高,即质地越黏重,土壤有机碳含量越高; 3)不同土体构型的平均土壤有机碳含量大小关系为通体砂通体壤上壤下黏夹黏,通体砂型土壤有机碳含量垂直变化相对平缓,上壤下黏型土壤有机碳含量在垂直方向呈"降-升-降"趋势,通体壤及夹黏型则均呈先快速下降后缓慢下降趋势; 4)耕地和园地土壤平均有机碳含量高于荒草地,耕地在整个剖面中土壤有机碳含量均居于三种土地利用类型之首,耕地和园地的土壤有机碳含量在0—20 cm和40—60 cm之间下降速度高达40.10%和55.92%,剖面深度超过60 cm后下降速度显著放缓,受人类活动直接影响相对较少的荒草地在垂直方向上变化相对平缓。     

北京城市与西北远郊地表臭氧浓度梯度移动监测研究

北京城市与区域臭氧浓度逐年升高,对自然生态系统已经构成影响。但地表臭氧在北京城市与远郊梯度空间上的连续递变特征机制尚不清楚。采用移动监测车,搭载臭氧分析仪,选择夏季典型臭氧污染天气,以北京教学植物园为对照点,从北京城市中心向西北远郊方向,多点位连续测定地表臭氧浓度。通过分析臭氧浓度和采样点周围归一化植被指数(NDVI)的关系以及典型臭氧污染情况下的天气形势和气团轨迹,探讨北京城市和区域臭氧浓度连续空间变化特征及机制。结果表明:(1)北京西北山区森林区域臭氧浓度显著高于"城市区域",约为城市区域的2.00倍。十三陵是地表臭氧浓度的分界点,从十三陵开始臭氧浓度陡然升高,在西北山区方向保持在高水平。空间上从高到低的顺序是西北山区(254.68μg/m~3)对照点教学植物园(220.89μg/m~3)城市支路(162.84μg/m~3)城市快速路和高速路(103.24μg/m~3);(2)植被分布影响臭氧空间格局。在相同时间范围内,臭氧浓度和NDVI正相关,随NDVI增加臭氧浓度呈Logistic增长;(3)西北山区地表臭氧空间变异系数为0.11,城市支路上平均为0.28,城市快速路上为0.26,高速公路上为0.36。山区地表臭氧浓度的空间变异系数最小,高速公路最大,城市快速路、城市支路空间变异较大;(4)大范围均压场、高压后部、低压前部等稳定型天气型易造成南向弱气流,能够把空气污染物输送到西北远郊,但本研究中监测到的西北山区高浓度臭氧并非当天从城区输送而来。北京城市与区域臭氧格局与植被的关系及成因需要深入研究。     

北京市六环内城市森林结构总体特征

城市森林结构决定了城市森林的外貌、总体绿量,影响其生态效益.本文对北京市六环外1 km范围内城市森林分层抽样调查,研究其多样性及乔木规格,并根据北京城市特点分析其空间差异,以期找出存在问题及梯度变化规律,为北京城市森林多样性保护及科学管理提供依据.通过对各类城市森林847个标准样方的调查,共记录木本植物50科、106属、159种,本地种占75%;城市森林植物群落仍然是少数物种主导,毛白杨(Populus tomentosa Carr.)与国槐(Sophora japonicaL.)分别为使用数量最多(9.7%)和使用频度最高(28.45%)的树种;乔木平均胸径19.79 cm,平均冠幅5.4 m,规格总体偏小,且规格差异不大.北京市城市森林沿城市发展方向由城内向城外展现出了明显的梯度变化:总物种数4环外多于4环内,最高为4~5环112种;多样性指数逐渐降低;乔木规格减小;“城六区”物种组成、多样性及乔木规格均优于其他行政区.     

TrioMDR: Detecting SNP interactions in trio families with model-based multifactor dimensionality reduction

Single nucleotide polymorphism (SNP) interactions can explain the missing heritability of common complex diseases. Many interaction detection methods have been proposed in genome-wide association studies, and they can be divided into two types: population-based and family-based. Compared with population-based methods, family-based methods are robust vs. population stratification. Several family-based methods have been proposed, among which Multifactor Dimensionality Reduction (MDR)-based methods are popular and powerful. However, current MDR-based methods suffer from heavy computational burden. Furthermore, they do not allow for main effect adjustment. In this work we develop a two-stage model-based MDR approach (TrioMDR) to detect multi-locus interaction in trio families (i.e., two parents and one affected child). TrioMDR combines the MDR framework with logistic regression models to check interactions, so TrioMDR can adjust main effects. In addition, unlike consuming permutation procedures used in traditional MDR-based methods, TrioMDR utilizes a simple semi-parameter P-values correction procedure to control type I error rate, this procedure only uses a few permutations to achieve the significance of a multi-locus model and significantly speeds up TrioMDR. We performed extensive experiments on simulated data to compare the type I error and power of TrioMDR under different scenarios. The results demonstrate that TrioMDR is fast and more powerful in general than some recently proposed methods for interaction detection in trios. The R codes of TrioMDR are available at: https://github.com/TrioMDR/TrioMDR.     

Production of fuels and chemicals from renewable resources using engineered Escherichia coli

Biotechnological production of fuels and chemicals from renewable resources is an appealing way to move from the current petroleum-based economy to a biomass-based green economy. Recently, the feedstocks that can be used for bioconversion or fermentation have been expanded to plant biomass, microbial biomass, and industrial waste. Several microbes have been engineered to produce chemicals from renewable resources, among which Escherichia coli is one of the best studied. Much effort has been made to engineer E. coli to produce fuels and chemicals from different renewable resources. In this paper, we focused on E. coli and systematically reviewed a range of fuels and chemicals that can be produced from renewable resources by engineered E. coli. Moreover, we proposed how can we further improve the efficiency for utilizing renewable resources by engineered E. coli, and how can we engineer E. coli for utilizing alternative renewable feedstocks. e.g. C1 gases and methanol. This review will help the readers better understand the current progress in this field and provide insights for further metabolic engineering efforts in E. coli.     

北京市怀沙-怀九河市级水生野生动物保护区鱼类物种多样性及其资源保护

怀沙河和怀九河是两条自然汇入北京怀柔水库的河流,被规划为北京市第一个市级水生野生动物保护区。2004年3月~2005年2月,作者对该保护区内野生鱼类资源进行了本底调查。调查区域内野生淡水鱼类共计24种(不计引入种),隶属于6目11科24属,以鲤形目鲤科鱼类为主,多为山区溪流小型鱼类。鱼类物种多样性在空间分布上有所不同,两河下游近水库河段物种多样性最高,这可能与两个不同生态环境交界处的边缘效应有关;其多样性在时间上春夏季高于秋冬季。结合区域内的生境特点,建议加强对核心区的保护力度,重新规划缓冲区和过渡区;在保护自然环境的同时,兼顾当地居民的经济利益,达到人与资源的和谐发展。     

北京西山侏罗纪大同锥叶蕨的研究

大同锥叶蕨Coniopteris tatungensis 是侏罗纪植物群常见的分子。由于对该植物特征认识的不同, 对其在分类上的归属有不同意见,或归入膜蕨型锥叶蕨C．hymenophylloides,或归入简单锥叶蕨C. simplex。通过对产自北京西山斋堂地区窑坡组下段的标本的深入研究,特别是用扫描电子显微镜对该 标本的孢子囊群和孢子囊的观察,确认大同锥叶蕨在锥叶蕨属的种级分类上的独立性。文中还初步讨论了其分类和地理分布。     

Treatment and utilization of wastewater in the Beijing Zoo by an aquatic macrophyte system

This paper deals with a nutrient cycling experiment in the Beijing Zoo that uses macrophytes as the added link to make a purification system. The whole system consisted of macrophyte cultivating area and no macrophyte area. By making up the different functional groups of aquatic plants, a multilevel cycling network is formed, which has a rather high purification capability. During the experimental period, the water quality of the Waterfowl Lake and the Peony Pavilion Lake improved significantly, with total nitrogen and total phosphorus reductions of up to 58 and 38%, respectively. Other parameters also confirmed the good purification effect of this system. The economic and social benefits met the requirement of the original design.     

上海口岸输入性传染性肺结核病患者中结核分枝杆菌北京型特征及耐药性分析

本研究旨在了解上海口岸输入性传染性肺结核病患者中结核分枝杆菌北京型特征及其对一线抗结核药物的耐药情况,从而正确评估输入性结核病给上海地区带来的公共卫生危害,同时为地区传染性结核病防治策略的制定提供依据。针对2009年1月～2013年5月上海口岸入境体检人员中胸部影像学诊断疑似活动性肺结核病的人群,采集其连续3 d的晨痰分离培养结核分枝杆菌,用MGIT960培养法分析其对抗结核药物（链霉素、异烟肼、利福平、乙胺丁醇、吡嗪酰胺）的耐药情况,用目标缺失多重聚合酶链反应（DTM-PCR ）进行结核分枝杆菌北京型分子分型,同时采集其人口学资料。期间共监测到入境外籍疑似活动性肺结核病者193例,其中50例痰液中分离培养到结核分枝杆菌,菌培阳率为25．9％,与我国结核病普查工作中活动性肺结核病菌培阳率（25．9％）相同。分离培养并成功传代、分型的40株结核分枝杆菌中,北京型占57．5％（23／40）,显著低于同期上海口岸出境人群中的90．2％（37／41）。输入性结核分枝杆菌北京型主要来自东南亚地区（71．4％,5／7）和西太平洋地区（57．1％,16／28）。一线5种抗结核药物的耐药性检测结果显示,输入性结核分枝杆菌北京型的总耐药率为30．4％（7／23）,接近上海口岸出境人群的34．1％。输入性耐多药菌株占2．4％（1／42）,分子分型结果显示为非北京型。输入性传染性肺结核病对吡嗪酰胺的耐药率为16．7％,显著高于上海口岸出境人群的2．4％。结果提示,上海口岸输入性肺结核病患者中结核分枝杆菌北京型所占比例显著低于同期出境人群,未发现与性别和年龄相关,未发现输入性结核分枝杆菌北京型对抗结核药物耐药性的显著变化。输入性耐药性结核病带来的公共卫生危害不容忽视,在直接督导下的短程化疗（DOTS）方案中需考虑其高吡嗪酰胺耐药特征。在口岸公共卫生安全风险评估中,需重视输入性结核分枝杆菌北京型与本地流行株的差异。