Genetic diversity and differentiation of central European freshwater pearl mussel (Margaritifera margaritifera L.) populations: implications for conservation and management

Despite the fact that mollusc species play an important role in many aquatic ecosystems, little is known about their biodiversity and conservation genetics. Freshwater pearl mussel (Margaritifera margaritifera L.) populations are seriously declining all over Europe and a variety of conservation programs are being established to support the remaining endangered central European populations. In order to provide guidelines for conservation strategies and management programs, we investigated the genetic structure of 24 freshwater pearl mussel populations originating from five major central European drainages including Elbe, Danube, Rhine, Maas and Weser, representing the last and most important populations in this area. We present a nondestructive sampling method of haemolymph for DNA analyses, which is applicable for endangered bivalves. The analyses of nine microsatellite loci with different levels of polymorphism revealed a high degree of fragmented population structure and very different levels of genetic diversity within populations. These patterns can be explained by historical and demographic effects and have been enforced by anthropogenic activities. Even within drainages, distinct conservation units were detected, as revealed from high F(ST) values, private alleles and genetic distance measures. Populations sampled close to contact zones between main drainage systems showed lowest levels of correct assignment to present-day drainage systems. Populations with high priority for conservation should not only be selected by means of census population size and geographical distance to other populations. Instead, detailed genetic analyses are mandatory for revealing differentiation and diversity parameters, which should be combined with ecological criteria for sustainable conservation and recovery programs.     

Distribution of Acid Proteinase Activity in Molluscs

Acid proteinases with an optimum around pH 3 were demontrated in various tissues of 12 molluscan species. Enzymes strongly inhibited by pepstatin were predominant and the molecular weights of those from two species were in the region of 38,000–68,000, suggesting that they were cathepsin D-type proteinases.     

Une espèce nouvelle du Kimméridgien du Portugal (Estremadura): Aulacomyella abadiensis nov. sp. (Bivalvia,Posidoniidae)

The Kimmeridgian Series situated at the North ofLisbon is included in the Portuguese Lusitanian basin. Its sandy clays pelagic facies with planctonic foraminifera contains a new species of bivalvia: Aulacomyella abadiensis related to A. neogeaeImlay from the Middle Kimmeridgian of Mexico and from the Kimmeridgian of Crimea. This species confirms the Middle Kimmeridgian.     

鄂东南地区下侏罗统武昌组的双壳类化石

湖北蒲圻车埠和大冶金山店下侏罗统武昌组的双壳类化石可划分为２个组合,武昌组中部Ｑｉｙａｎｇｉａ－Ａｐｓｅｕｄｏｃａｒｄｉｎｉａ组合和武昌组上部Ｈｕｂｅｒｉｃｏｎｃｈａ－Ｋｉｊａ（Ｗｕｃｈａｎｇｅｌｌａ）组合,前者时代为早侏罗世中晚期;后者暂归于早侏罗世最晚期。文中描述２新属１新亚属以及１５新种。     

Is the Scotia Sea a centre of Antarctic marine diversification? Some evidence of cryptic speciation in the circum-Antarctic bivalve <Emphasis Type="Italic">Lissarca notorcadensis</Emphasis> (Arcoidea: Philobryidae)

The bivalve Lissarca notorcadensis is one of the most abundant species in Antarctic waters and has colonised the entire Antarctic shelf and Scotia Sea Islands. Its brooding reproduction, low dispersal capabilities and epizoic lifestyle predict limited gene flow between geographically isolated populations. Relationships between specimens from seven regions in the Southern Ocean and outgroups were assessed with nuclear 28S rDNA and mitochondrial cytochrome oxidase subunit I (COI) genes. The 28S dataset indicate that while Lissarca appears to be a monophyletic genus, there is polyphyly between the Limopsidae and Philobryidae. Thirteen CO1 haplotypes were found, mostly unique to the sample regions, and two distinct lineages were distinguished. Specimens from the Weddell and Ross Sea form one lineage while individuals from the banks and islands of the Scotia Sea form the other. Within each lineage, further vicariance was observed forming six regionally isolated groups. Our results provide initial evidence for reproductively isolated populations of L. notorcadensis. The islands of the Scotia Sea appear to act as centres of speciation in the Southern Ocean.     

Ross Sea Mollusca from the Latitudinal Gradient Program: R/V Italica 2004 Rauschert dredge samples

Information regarding the molluscs in this dataset is based on the Rauschert dredge samples collected during the Latitudinal Gradient Program (LGP) on board the R/V “Italica” in the Ross Sea (Antarctica) in the austral summer 2004. A total of 18 epibenthic dredge deployments/samplings have been performed at four different locations at depths ranging from 84 to 515m by using a Rauschert dredge with a mesh size of 500μm. In total 8,359 specimens have been collected belonging to a total of 161 species. Considering this dataset in terms of occurrences, it corresponds to 505 discrete distributional records (incidence data). Of these, in order of abundance, 5,965 specimens were Gastropoda (accounting for 113 species), 1,323 were Bivalvia (accounting for 36 species), 949 were Aplacophora (accounting for 7 species), 74 specimens were Scaphopoda (3 species), 38 were Monoplacophora (1 species) and, finally, 10 specimens were Polyplacophora (1 species). This data set represents the first large-scale survey of benthic micro-molluscs for the area and provides important information about the distribution of several species, which have been seldom or never recorded before in the Ross Sea. All vouchers are permanently stored at the Italian National Antarctic Museum (MNA), Section of Genoa, enabling future comparison and crosschecking. This material is also currently under study, from a molecular point of view, by the barcoding project “BAMBi” (PNRA 2010/A1.10).     

Molluscan fauna of Gueishan Island,Taiwan

This dataset records the occurrence and inventory of molluscan fauna on Gueishan Island, the only active volcanic island in Taiwan, based on the literature survey and field investigation conducted between 2011 and 2012. The literature review involved seven studies published from 1934 to 2003, which collectively reported 112 species from 61 genera and 37 families of Mollusca on Gueishan Island. Through our field investigation, we identified 34 species from 28 genera and 23 families. Fourteen of these species were new records on Gueishan Island: Liolophura japonica, Lottia luchuana, Nerita costata, Nerita rumphii, Diplommatina suganikeiensis, Littoraria undulata, Solenomphala taiwanensis, Assiminea sp., Siphonaria laciniosa, Laevapex nipponica, Carychium hachijoensis, Succinea erythrophana, Zaptyx crassilamellata, and Allopeas pyrgula. In Total, there are 126 species from 71 genera and 45 families of Mollusca on Gueishan Island. These data have been published through GBIF [http://taibif.org.tw/ipt/resource.do?r=gueishan_island] and integrated into the Taiwan Malacofauna Database (http://shell.sinica.edu.tw/).     

Fosmid library construction and end sequences analysis of the Pacific oyster,Crassostrea gigas

The Pacific oyster (Crassostrea gigas) is globally distributed and is one of the most commercially and ecologically important marine organisms. However, little is known about the genome of this species. In this study, a C. gigas fosmid library was constructed that contains 459,936 clones with an average insert size of approximately 40 kb, representing 22.34-fold haploid genome equivalents. End sequencing generated 90,240 fosmid end sequences (FESs) with an average length of 384.27 base pairs (bp), covering approximately 2.58% of the Pacific oyster genome. The FESs were subsequently assembled and annotated, resulting in 6332 sequences with predicted open reading frames≥300 and 1,189,100 bp repeats. Furthermore, a total of 3200 microsatellite repeats were identified, and dinucleotide repeats were found to occur most abundantly, with AG and AAT being the most abundant repeat class of dinucleotides and trinucleotides. We also found that the repeat number was generally negatively proportional to the repeat element length. Microsatellites composition between the transcribed sequences and genomic sequences was shown to be different. Point mutations of microsatellite were non-random and underwent strong selection stress. Overall, a comprehensive sequence resource for the Pacific oyster was created, including annotated transposable elements, tandem repeats, protein coding sequences and microsatellites. These initial findings will serve as resources for further in-depth studies of physical mapping, gene discovery, microsatellite marker developing and evolution studies.     

Lower Permian bivalves from central Patagonia, Argentina

The earliest Permian faunal successions of central Patagonia show compositional changes that probably reflected the environmental warming at the end of the Gondwana glaciations. Bivalves of Asselian to probably Early Tastubian age are described. A new genus,Sueroa, is proposed to reunite a previously known species and a new species,Sueroa andreisi n. sp. Another five new species:Parallelodon? quichaurensis n. sp.,Heteropecten cortignasi n. sp.,Etheripecten saraviae n. sp.,Streblopteria montgomeryi n. sp. andPraeundulomya moreli n. sp. are described. Two previously known species:Malimania patagoniensis (González) andEuchondria sabattiniae González are revised and new occurrences are reported. A further eleven species are described, but they are left in open nomenclature being because they are insufficiently known; these are:Phestia? n. sp.,Modiolus sp.,Palaeoneilo sp.,Stutchburia sp.,Schizodus sp.,Vacunella? sp.,Edmondia sp.,Myonia? n. sp.,Myonia? sp. andPachymyonia? n. sp.     

Seasonal stable isotope variations of the modern Amazonian freshwater bivalve Anodontites trapesialis

In a floodplain lake of the Amazon River near the city of Iquitos, northeastern Peru, a one-year monitoring experiment was conducted during which water samples and living bivalves (Anodontites trapesialis) were collected with the aim to investigate seasonal δ¹⁸O variation in and fractionation between bivalve aragonite and host water. Both host water and molluscan growth increments show more than 8‰ seasonal variation in δ¹⁸O. In the floodplain lake under study the δ¹⁸O variation of the water is controlled by contrasting dry and wet season evaporation-precipitation regimes. Molluscan δ¹⁸O appears to be in equilibrium with the host water. Although an approximately 4.0‰ offset occurs, δ¹³C records of water and bivalves are in good agreement, suggesting that both δ¹⁸O and δ¹³C of the shells of freshwater bivalve A. trapesialis are good recorders of (palaeo-)environmental conditions. The δ¹³C of Dissolved Inorganic Carbon (DIC) is governed by plant growth and/or by changes in aquatic chemistry, affecting the DIC pool.