Non‐synonymous SNPs in MC1R gene are associated with the extended black variant in domestic ducks (Anas platyrhynchos)

In this study, we performed a sequence characterization of the duck melanocortin 1 receptor (alpha‐melanocyte stimulating hormone receptor) (MC1R) gene to analyze the relationship between MC1R polymorphism and the extended black variant in domestic ducks based on the extended black (E) and non‐extended black (e⁺) allele hypothesis of the duck MC1R gene. Both c.52G>A and c.376G>A substitutions are highly associated with the duck extended black variant (P < 0.01), but the novel c.52G>A substitution is more of a fit for the allele hypothesis of the duck MC1R gene.     

Seeing sunlit owls in a new light: orienting Snowy Owls may not be displaying

Snowy Owls Bubo scandiacus often face the sun when sitting on the ground or when perched. Such sun‐orienting has been suggested to represent a visual display to conspecifics but other explanations have not been thoroughly examined. We observed the orientation of wintering Snowy Owls to both the sun and the wind, and their perching behaviour during two winters in central Saskatchewan, Canada. We proposed three new explanations for sun orientation in addition to the display hypothesis: thermoregulation, hunting and defence against predators. On sunny days, 44% of 710 Owls faced the sun; this was non‐random because few did so on overcast days. Sun‐ as opposed to wind‐orienting was strongly associated with weather conditions. Logistic regressions indicated that at temperatures below –13 °C and at wind speeds greater than about 18 km/h, Owls tended to orient to the wind rather than to the sun. The likelihood of wind‐orienting increased if the Owl perched above the ground, whereas the likelihood of sun‐orientating increased slightly when the Owl was sitting on the ground. There was no difference between the sexes in orienting behaviour. Snowy Owls seemed to prioritize wind‐orienting for thermoregulation but the results are also consistent with the idea that sun‐orientation can reduce heat loss. Facing into the sun did not support the hunting explanation because the birds would have been blinded and not able to see prey, but was consistent with the protection explanation if it helps to increase vigilance against enemies. Although we cannot completely rule out the display explanation, the spatial context of sunning Owls and a lack of a sex effect makes it unlikely that this is the main function. Instead, Owls seem to trade‐off wind‐ vs. sun‐orienting according to the prevailing weather conditions and do so mainly to thermoregulate and perhaps to maintain vigilance.     

POPULATION DIVERGENCE IN SEXUAL ORNAMENTS: THE WHITE FOREHEAD PATCH OF NORWEGIAN PIED FLYCATCHERS IS SMALL AND UNSEXY

Models of sexual selection suggest that populations may easily diverge in male secondary sexual characters. Studies of a Spanish population of the pied flycatcher, Ficedula hypoleuca, and a Swedish population of the closely related collared flycatcher, F. albicollis, have indicated that the white forehead patch of males is a sexually selected trait. We studied the white forehead patch of male pied flycatchers (n = 487) in a Norwegian population over seven years. Males with large forehead patches were in general more brightly colored, but patch height was not correlated to body mass, body size, or parasite loads. Conditions during the nestling period did not seem to influence patch height as an adult. Patch height increased slightly from the first to the second year as adults, but then remained relatively constant at higher ages. Patch height was not related to survival. Year-to-year changes showed that males who increased in patch height also increased in body mass, suggesting that expression of the forehead patch may be partly condition dependent. However, changes in body mass explained only a small proportion of the variance in patch height between males. Thus, patch height would not be a good indicator of male quality. Furthermore, patch size was also not related to male ability to feed nestlings, indicating that females would not obtain direct benefits by choosing males with large patches. However, patch height could be a Fisher trait, but this requires heritability and there was no significant father-son resemblance in patch height. Comparisons of the males visited by each female during the mate sampling period indicated that chosen males did not have larger forehead patches than rejected males. Experimental manipulation of patch height did not affect male mating success. These results indicate that females do not use patch size as a mate choice cue. Finally, patch height did not predict the outcome of male contests for nestboxes, suggesting that the forehead patch is not an intrasexually selected cue of status. Norwegian pied flycatchers have smaller forehead patches than both Spanish pied flycatchers and Swedish collared flycatchers. We suggest that this pattern may be explained by the lack of sexual selection on the forehead patch in the Norwegian population as compared to the other populations, where the patch is apparently sexually selected. We discuss possible reasons for these population divergences, such as female choice on an alternative secondary sexual character (general plumage color) and speciation among Ficedula flycatchers.     

Using molt cycles to categorize the age of tropical birds: an integrative new system

ABSTRACT Accurately differentiating age classes is essential for the long‐term monitoring of resident New World tropical bird species. Molt and plumage criteria have long been used to accurately age temperate birds, but application of temperate age‐classification models to the Neotropics has been hindered because annual life‐cycle events of tropical birds do not always correspond with temperate age‐classification nomenclature. However, recent studies have shown that similar molt and plumage criteria can be used to categorize tropical birds into age classes. We propose a categorical age‐classification system for tropical birds based on identification of molt cycles and their inserted plumages. This approach allows determination of the age ranges (in months) of birds throughout plumage succession. Although our proposed cycle‐based system is an improvement over temperate calendar‐based models, we believe that combining both systems provides the most accurate means of categorizing age and preserving age‐related data. Our proposed cycle‐based age‐classification system can be used for all birds, including temperate species, and provides a framework for investigating molt and population dynamics that could ultimately influence management decisions.     

Extensive phenotypic diversification coexists with little genetic divergence and a lack of population structure in the White Wagtail subspecies complex (Motacilla alba)

Geographically clustered phenotypes often demonstrate consistent patterns in molecular markers, particularly mitochondrial DNA (mtDNA) traditionally used in phylogeographic studies. However, distinct evolutionary trajectories among traits and markers can lead to their discordance. First, geographic structure in phenotypic traits and nuclear molecular markers can be co‐aligned but inconsistent with mtDNA (mito‐nuclear discordance). Alternatively, phenotypic variation can have little to do with patterns in neither mtDNA nor nuclear markers. Disentangling between these distinct patterns can provide insight into the role of selection, demography and gene flow in population divergence. Here, we examined a previously reported case of strong inconsistency between geographic structure in mtDNA and plumage traits in a widespread polytypic bird species, the White Wagtail (Motacilla alba). We tested whether this pattern is due to mito‐nuclear discordance or discrepancy between morphological evolution and both nuclear and mtDNA markers. We analysed population differentiation and structure across six out of nine commonly recognized subspecies using 17 microsatellite loci and a combination of microsatellites and plumage indices in a comprehensively sampled region of a contact between two subspecies. We did not find support for the mito‐nuclear discordance hypothesis: nuclear markers indicated a subtle signal of genetic clustering only partially consistent with plumage groups, similar to previous findings that relied on mtDNA. We discuss evolutionary factors that could have shaped the intricate patterns of phenotypic diversification in the White wagtail and the role that repeated selection on plumage ‘hotspots’ and hybridization may have played.     

Color expression in experimentally regrown feathers of an overwintering migratory bird: implications for signaling and seasonal interactions

Plumage coloration in birds plays a critical role in communication and can be under selection throughout the annual cycle as a sexual and social signal. However, for migratory birds, little is known about the acquisition and maintenance of colorful plumage during the nonbreeding period. Winter habitat could influence the quality of colorful plumage, ultimately carrying over to influence sexual selection and social interactions during the breeding period. In addition to the annual growth of colorful feathers, feather loss from agonistic interactions or predator avoidance could require birds to replace colorful feathers in winter or experience plumage degradation. We hypothesized that conditions on the wintering grounds of migratory birds influence the quality of colorful plumage. We predicted that the quality of American redstart (Setophaga ruticilla) tail feathers regrown after experimental removal in Jamaica, West Indies, would be positively associated with habitat quality, body condition, and testosterone. Both yearling (SY) and adult (ASY) males regrew feathers with lower red chroma, suggesting reduced carotenoid content. While we did not observe a change in hue in ASY males, SY males shifted from yellow to orange plumage resembling experimentally regrown ASY feathers. We did not observe any effects of habitat, testosterone, or mass change. Our results demonstrate that redstarts are limited in their ability to adequately replace colorful plumage, regardless of habitat, in winter. Thus, feather loss on the nonbreeding grounds can affect social signals, potentially negatively carrying over to the breeding period.     

Ornament and body size variation and their measurement in natural populations

Measurement of intrapopulation variation in secondary sexual traits is a priority in the testing of sexual selection models. However, it is important to take care in the choice of materials and delimitation of populations. The use of museum skins to study variation in male tail ornaments may substantially underrepresent the real degree of intrapopulation variation. Data from live animals in specific areas provide more realistic estimates, and should be used whenever possible. I use as an example field data on male ornament length and body size in Vidua macroura (Aves: Ploceidae), a promiscuous, parasitic African finch with elongated tail plumes. Individual males differ in the timing and rate of ornament growth, and females are therefore faced with a large degree of phenotypic variation in male ornament size, even though genetic variation may not be great. By correcting for seasonal variation in the ornament lengths of males caught at different times, I show that mid-season coefficients of variation in ornament length of breeding males in two populations are as high as 18% and 55%. By contrast, tarsus, wing and unornamented tail lengths of the same males vary from 2 to 4%.     

Females mate with males with diminished pheomelanin‐based coloration in the Eurasian nuthatch Sitta europaea

Sexual selection can drive the evolution of phenotypic traits because of female preferences for exaggerated trait expression in males. Sexual selection can also lead to the evolutionary loss of traits, a process to which female preferences for diminished male trait expression are hypothesized to contribute. However, empirical evidence of female preferences for diminished male traits is virtually lacking. Eurasian nuthatches Sitta europaea provide an opportunity to test this possibility, as a chestnut flank patch produced by the pigment pheomelanin is present since the first plumage of these birds and its color is more intense in nestlings in poor condition in our study population. It has been proposed that developing birds in poor condition may increase their production of pheomelanin as a detoxifying strategy. Female nuthatches may thus prefer mating with males showing flank feathers of diminished color, as this could indicate that males experienced good conditions early in development, which can positively affect the fitness of future generations. Here we show results according with this prediction in a wild population of Eurasian nuthatches, as adult males with lighter chestnut feathers paired earlier in the season, while chestnut coloration had no effect on female mating success. Chestnut color expression was not affected by the body condition of birds, suggesting that females obtain information on the body condition in early life of their potential mates and not on their current body condition. This constitutes one of the few examples of females mating with males showing diminished traits and provides the only explanation so far by which this process can occur.     

Differential divergence in autosomes and sex chromosomes is associated with intra‐island diversification at a very small spatial scale in a songbird lineage

Recently diverged taxa showing marked phenotypic and ecological diversity provide optimal systems to understand the genetic processes underlying speciation. We used genome‐wide markers to investigate the diversification of the Reunion grey white‐eye (Zosterops borbonicus) on the small volcanic island of Reunion (Mascarene archipelago), where this species complex exhibits four geographical forms that are parapatrically distributed across the island and differ strikingly in plumage colour. One form restricted to the highlands is separated by a steep ecological gradient from three distinct lowland forms which meet at narrow hybrid zones that are not associated with environmental variables. Analyses of genomic variation based on single nucleotide polymorphism data from genotyping‐by‐sequencing and pooled RAD‐seq approaches show that signatures of selection associated with elevation can be found at multiple regions across the genome, whereas most loci associated with the lowland forms are located on the Z sex chromosome. We identified TYRP1, a Z‐linked colour gene, as a likely candidate locus underlying colour variation among lowland forms. Tests of demographic models revealed that highland and lowland forms diverged in the presence of gene flow, and divergence has progressed as gene flow was restricted by selection at loci across the genome. This system holds promise for investigating how adaptation and reproductive isolation shape the genomic landscape of divergence at multiple stages of the speciation process.