Reproductive biology and systematics of phallostethid fishes as revealed by gonad structure

Synopsis Testis and ovary structure was examined histologically in seven of the 19 species in the three tribes of the teleost fish family Phallostethidae, series Atherinomorpha. These diminutive species have testes in which spermatogonia are restricted to the distal ends of lobules, a diagnostic character of atherinomorphs. Sperm in the ovarian lumen and chorionic attachment filaments on eggs confirms observations that phallostethids are internally fertilizing and lay fertilized eggs. The immense number of sperm in ovarian cavities means that all, or nearly all, ovulated oocytes will be fertilized. As revealed in histological sections, testicular ducts in most phallostethids examined contain granular secretions that have not been reported in any other atherinomorphs. Species in the tribes Neostethini and Gulaphallini form unique spermatozeugmata that differ from those of other internally fertilizing atherinomorphs examined in that they have sperm nuclei that are oriented towards one side of the sperm bundle. Spermatozeugmata are not formed in species in the tribe Phallostethini. A unique spermatozeugmatum is interpreted as being a diagnostic character of phallostethids that has been lost or modified in phallostethins. Gonads of phallostethids and hypothesized close relatives are posterior and posteroventral to the gut rather than dorsal to the gut, as they are in most other fishes. Museum specimens preserved over sixty-five years ago are as useful for demonstrating gonad histology as are those preserved in the past few years.     

Allosyncarpia-dominated rain forest in monsoonal northern Australia

Following recent classifications of rain forest vegetation in northern Australia this paper examines the biogeo-graphical status and condition of a rain forest type endemic to that region, dominated by the sclerophyll Allosyncarpia ternata (Myrtaceae). These forests are restricted to the Arnhem Land region of the Northern Territory, which includes Kakadu National Park. They cover an area of 1138 km², or 41 % of all rain forest in northern and northwestern Australia. DCA of floristic data from 140 sites illustrates that Allosyncarpia forests occupy a range of sandstone-derived substrates, from moist valley sediments to steep, freely draining, rocky sites. DCA of floristic transect data illustrates that Allosyncarpia is by far the dominant canopy species over this topographic-moisture sequence, but especially on seasonally dry substrates where it provides over 80 % basal area and effectively the entire canopy. DCA of floristic quadrat data from a floristi-cally singular site illustrates major death of the fire-sensitive gymnosperm Callitris intratropica, and, to a lesser extent, Allosyncarpia itself, on the forest-savanna boundary. Biogeographical implications arising from the Gondwanic distributions of Allosyncarpia and its close relatives, Arillas-trum (New Caledonia), Eucalyptopsis (eastern Malesia), and an as yet undescribed taxon (eastern Australia), suggest that taxa ancestral to this group were extensive in the late Cretaceous. Their current restriction is in marked contrast to the success of their near relatives, the eucalypts. Given the tolerance of Allosyncarpia to a wide range of substrate moisture conditions in the present day, it is argued that fire regulates patch margins of this forest type. Although tolerant of light fires, canopy trees at patch margins are susceptible under a regime of frequent, intense late dry-season fires, such as are prevalent in Arnhem Land today. For effective conservation of fire-sensitive communities in this floristically significant region, greater attention must be given to management and monitoring of the fire regime.     

Further notes on the fishes from the collection of Laurens Theodore Gronovius (1730–1777)

Previously unrecognized fish specimens from the collection of Laurens Theodore Gronovius (1730–1777) are catalogued and described. Five specimens of as many taxa are in the collection of the British Museum (Natural History) and nine specimens of seven taxa preserved in alcohol are in the collection of the Zoological Museum, Copenhagen, With one exception all have been examined; they are identified, related to the literature and eight specimens are shown to be part of the type series of Linnaean fish taxa.     

Molecular identification of two species of myiasis-causing Cuterebra by multiplex PCR and RFLP

The myiasis-causing flies Cuterebra grisea (Coquillet) and Cuterebra fontinella (Clark) (Diptera: Oestridae) are normally parasites of mice, predominantly of the genus Peromyscus. The morphological similarities of these species and the existence of intermediate morphotypes bearing characters of both species make the identification of adults problematic; furthermore the identification of larvae is apparently not possible. This study presents two molecular approaches to discriminate between these species using specific band patterns: (i) species-specific primers designed in the cytochrome oxidase II (COII) region used in multiplex polymerase chain reaction (PCR) and (ii) restriction fragment length polymorphism (RFLP) on amplified segments of cytochrome oxidase I (COI) gene. Both methods were tested on Cuterebra larvae and on adult museum specimens. The two techniques showed a clear difference between C. grisea and C. fontinella, although species-specific primers were more successful than RFLP for degraded DNA. No intraspecific variation in RFLP and species-specific amplifications were detected for the two species of Cuterebra. The results exhibit discrepancies between molecular and morphological identification, suggesting that some of the adults were misidentified.     

Genomic Approaches Reveal Unexpected Genetic Divergence Within Ciona intestinalis

The invertebrate chordate Ciona intestinalis is a widely used model organism in biological research. Individuals from waters ranging from arctic to temperate are morphologically almost indistinguishable. However, we found significant differences in whole genomic DNA sequence between northern European and Pacific C. intestinalis. Intronic and transposon sequences often appear unrelated between these geographic origins and amino acid substitutions in protein coding sequences indicate a divergence time in excess of 20 MYA. This finding suggests the existence of two cryptic species within the present C. intestinalis species. We found five marker loci which distinguish the two genetic forms by PCR. This analysis revealed that specimens from Naples, Italy, have the Pacific-type genome, perhaps due to human-mediated marine transport of species. Despite major genomic divergence, the two forms could be hybridized in the laboratory. [Reviewing Editor: Dr. Martin Kreitman]     

Spatially heterogeneous impact of climate change on small mammals of montane California

Resurveys of historical collecting localities have revealed range shifts, primarily leading edge expansions, which have been attributed to global warming. However, there have been few spatially replicated community-scale resurveys testing whether species'' responses are spatially consistent. Here we repeated early twentieth century surveys of small mammals along elevational gradients in northern, central and southern regions of montane California. Of the 34 species we analysed, 25 shifted their ranges upslope or downslope in at least one region. However, two-thirds of ranges in the three regions remained stable at one or both elevational limits and none of the 22 species found in all three regions shifted both their upper and lower limits in the same direction in all regions. When shifts occurred, high-elevation species typically contracted their lower limits upslope, whereas low-elevation species had heterogeneous responses. For high-elevation species, site-specific change in temperature better predicted the direction of shifts than change in precipitation, whereas the direction of shifts by low-elevation species was unpredictable by temperature or precipitation. While our results support previous findings of primarily upslope shifts in montane species, they also highlight the degree to which the responses of individual species vary across geographically replicated landscapes.     

Design of Mini‐barcode for Catfishes for assessment of archival biodiversity

Recovery of DNA barcode sequences is often challenging from the archived specimens. However, short fragments of DNA may be recovered, which would significantly improve many unresolved taxonomic conflicts. Here, we designed a mini‐barcode for catfishes comprising several species and many cryptic taxa. We analysed a data set of 3048 publicly available COI barcode sequences representing 547 worldwide catfish species and performed 152 628 interspecies comparisons. A significantly more positively correlated interspecies distance was detected with transversion (0.78, P < 0.001) than with transition (0.70, P < 0.001). This suggested that transversions were better diagnostics for species identification. In the aligned data set, two transversion‐rich fragments (53 bp and 119 bp) were identified. Transition/transversion bias value was 1.04 in 53‐bp fragment, 1.23 in 119‐bp fragment and 1.50 in full‐length barcode. The interspecies distance with full‐length barcode was 0.212 ± 0.037, while that with 53‐bp and 119‐bp fragments was 0.325 ± 0.039 and 0.218 ± 0.045, respectively. Survey of 53‐bp fragment showed a possibility of only 1144 barcodes, while that of 119‐bp fragment showed >4 million barcodes. Thus, the 119‐bp fragment is a viable mini‐barcode for catfishes comprising >3000 extant species. Experiment with 82 archived catfishes showed successful recovery of this mini‐barcode using the designed primer. The mini‐barcode sequences showed species‐specific similarity in the range of 98‐100% with the global database. Therefore, survey of a transversion‐rich fragment within the full‐length barcode would be an ideal approach of mini‐barcode design for biodiversity assessment.     

中国竹类植物馆藏标本现状与地理分布

馆藏标本是分类学研究的主要凭证, 对特定类群标本的采集信息进行细致整理和分析, 有助于理解该类群研究的历史、现状和不足。此外, 结合最新的系统学研究成果和相应的环境数据构建生态位模型, 可以加深人们对特定类群分类与分布状况的认识。被子植物的分类鉴定常基于繁殖性状进行, 然而, 竹类植物一般进行克隆繁殖, 只有在经过长期的营养生长之后, 才会进行有性生殖并同时死亡。因此, 国内的竹类标本大多仅记录了营养性状, 具有繁殖性状的标本数量稀少。由于这一特殊的生物学习性, 竹类植物是当今分类学研究中最为困难的类群之一。本研究基于全国竹类植物馆藏标本的采集数据, 分析了我国竹类标本的采集和保藏现状; 利用比值法和斜率法从采集地理偏差和采集类群偏差两方面评估了竹类植物标本的采集完整度; 结合气候数据, 利用模型模拟的方法分析了影响不同竹类分支分布的主要因素。采集信息分析结果表明, 国内标本馆对竹类标本的收集和保藏存在很大的不均衡性, 且对研究团队具有较高的依赖性; 其次竹类标本的采集量的变化较好地反映了国内植物分类学研究的历史; 而对类群和地理采集完整度的评估结果表明, 中国竹类标本的采集和整理工作仍任重道远。模型模拟结果表明, 温度限定了竹类植物两大分支各自的分布北界, 水分对温带木本竹类分支(temperate woody bamboos, TWB)的限制作用比旧世界热带木本竹类分支(paleotropical woody bamboos, PWB)强, 而温度对PWB的限制性更强。生态位模拟的结果进一步显示, 中国温带和旧世界热带木本竹类两大分支的适生区出现了明显的分化, 但在亚热带区域仍有部分重叠。植物标本记录了特定类群在时间和空间上的分布格局, 相关的信息一方面可以促进物种灭绝风险评估、可持续利用和综合保护, 另一方面也可助力大尺度生物多样性分布格局及全球变化对多样性的影响研究。     

Advancing frost dates have reduced frost risk among most North American angiosperms since 1980

In recent decades, the final frost dates of winter have advanced throughout North America, and many angiosperm taxa have simultaneously advanced their flowering times as the climate has warmed. Phenological advancement may reduce plant fitness, as flowering prior to the final frost date of the winter/spring transition may damage flower buds or open flowers, limiting fruit and seed production. The risk of floral exposure to frost in the recent past and in the future, however, also depends on whether the last day of winter frost is advancing more rapidly, or less rapidly, than the date of onset of flowering in response to climate warming. This study presents the first continental‐scale assessment of recent changes in frost risk to floral tissues, using digital records of 475,694 herbarium specimens representing 1,653 angiosperm species collected across North America from 1920 to 2015. For most species, among sites from which they have been collected, dates of last frost have advanced much more rapidly than flowering dates. As a result, frost risk has declined in 66% of sampled species. Moreover, exotic species consistently exhibit lower frost risk than native species, primarily because the former occupy warmer habitats where the annual frost‐free period begins earlier. While reducing the probability of exposure to frost has clear benefits for the survival of flower buds and flowers, such phenological advancement may disrupt other ecological processes across North America, including pollination, herbivory, and disease transmission.