好氧反硝化细菌及其在微污染水源水修复中的应用研究进展

相比于氨氮,天然水体中的硝酸盐氮通常更稳定,导致更难将其从水中去除。由于好氧反硝化可以在有氧环境下进行反硝化作用去除硝酸盐氮,该过程对含有较高溶解氧的天然水体中硝酸盐氮处理有重要作用。本文综述了好氧反硝化菌的分离纯化现状、微生物代谢机制和环境影响因子,并介绍了功能菌群在微污染饮用水源水生物修复的应用研究进展。与一般的厌氧反硝化类似,好氧反硝化菌的种属分布较广,常见的如假单胞菌属(Pseudomoas)、产碱杆菌属(Alcaligenes)、副球菌属(Paracoccus)和芽孢杆菌属(Bacillus)等所属部分微生物均有好氧反硝化能力。大部分好氧反硝化菌株在最佳生长条件下(25–37℃、溶解氧浓度为3–5mg/L、pH为7–8、碳氮比为5–10)具有高效的脱氮效率。但目前好氧反硝化作用在微污染饮用水源水的生物修复方面的应用仍有着脱氮性能不稳定、菌剂流失等不足。此外,目前较少相关中试及实际工程应用的研究,需要进一步的深入探究。     

城市建筑屋顶光伏发电潜力评估方法和模型

建筑屋顶作为闲置的土地资源已成为光伏发电重要的潜在空间,屋顶光伏发电是脱碳电力供应的主要方式,将在实现城市碳中和进程中发挥重要作用。对建筑屋顶光伏发电潜力进行精确评估将有助于分布式光伏的科学规划和合理布局,提升土地利用效率。旨在对建筑屋顶光伏发电潜力影响因素和评估方法,以及光伏发电潜力主要评估模型进行系统性阐述,比较分析不同评估方法的优缺点,总结未来研究的重点方向。现有研究表明,建筑屋顶光伏发电潜力评估已从经验取值发展为定量空间分析,评估尺度、评估精度和评估成本已经成为不同评估方法综合权衡的重点。现有三种评估方法中,采样法计算成本和数据成本较低,但评估结果不确定性较大、精度较低;全面评估法评估精度较高,但数据获取成本和计算成本较高;机器学习法能够高效挖掘大数据潜力,且算法性能显著提升,因而相较于其他方法更适宜大尺度建筑屋顶光伏发电潜力评估。当前建筑屋顶光伏发电潜力评估仍然存在大尺度精细评估缺乏、评估结果不确定性大以及评估模型计算量大等问题。未来研究重点应关注三个方面：1)建立适宜不同区域的高精度简化模型并完善技术潜力评估模型;2)阐明建筑屋顶光伏发电潜力的影响因素,为代表性建筑分类体系...     

成渝城市群区域生态与城镇发展双网络格局分析及时空演变

协调生态网络格局与城镇网络格局是城市可持续发展的重要课题。基于2000、2010、2020年成渝城市群3期土地利用数据,应用形态空间格局分析(MSPA)、景观格局指数、景观连通性、最小累计阻力(MCR)模型等方法构建研究区生态源地与生态廊道、经济社会源地与交通廊道形成的区域生态网络格局与城镇发展网络格局,分析节点、廊道、源地、网络等“点、线、面、网”4类空间要素特征与演变趋势,探讨区域双网络格局空间关系与干扰时空变化情况。结果表明：(1)2000—2020年,研究区生态源地与生态廊道受到不同程度城镇化影响,两者总面积分别减少2660.26 km²、1169.9 km²,经济社会源地与交通廊道总面积则分别增长4324.19 km²、2392.14 km²;(2)以重庆中部、四川西南部为核心的高密度区生态关键点在2000—2020年间重心呈现先由东至西南迁移,后又向东及东北回移的趋势,数量减少了311,同时2020年生态干扰点数量达到2000年的3倍;(3)2000—2020年交通廊道对生态源地的干扰不...     

宁夏河东沙区刺槐和丝绵木水分利用策略

刺槐和丝绵木混交林是宁夏河东沙区防护林建设的主要模式,了解刺槐和丝绵木的水分利用策略,能为区域植被恢复和防护林林分结构调整提供科学依据。以宁夏河东沙区刺槐(Robinia pseudoacacia)和丝绵木(Euonymus bungeanus)混交林为研究对象,通过监测微气象、树干液流和土壤质量含水量,结合大气降水、土壤水、植物木质部水同位素组成,采用Granier及其校正公式,运用贝叶斯混合模型(MixSIAR)和相似性比例指数(PS)研究2个树种的蒸腾耗水、水分来源和水分利用关系。结果表明：刺槐和丝绵木的蒸腾耗水量在生长季中期较高,前期和后期较小,刺槐的蒸腾耗水量是丝绵木的1.55倍;影响刺槐蒸腾耗水的主要环境因子为饱和水汽压差、太阳辐射、0—40 cm土壤质量含水量和40—120 cm土壤质量含水量;影响丝绵木蒸腾耗水的主要环境因子为饱和水汽压差、太阳辐射、平均气温、0—40 cm土壤质量含水量和40—120 cm土壤质量含水量;蒸腾耗水较高时,刺槐主要吸收利用中层土壤水,丝绵木主要吸收利用浅层土壤水,蒸腾耗水较低时,刺槐主要吸收利用浅层土壤水,丝绵木主要吸收利用中层土壤水;在...     

基于碳酸酐酶IX的肿瘤成像和治疗研究进展

碳酸酐酶IX (carbonic anhydrase IX, CAIX)是一种在乏氧肿瘤细胞表面特异性过表达的跨膜蛋白,具有调节肿瘤细胞内外酸碱度的功能,与肿瘤增殖、侵袭和转移息息相关。因此,CAIX是一个很有潜力的肿瘤成像和治疗靶点。本文详细阐述了基于CAIX的肿瘤成像、治疗和诊疗一体化的研究进展,并对CAIX作为抗肿瘤靶点的应用前景进行了展望。     

Refined structure of bovine carbonic anhydrase III at 2.0 Å resolution

The three-dimensional structure of bovine carbonic anhydrase III (BCA III) from red skeletal muscle cells has been determined by molecular replacement methods. The structure has been refined at 2.0 Å resolution by both constrained and restrained structure-factor least squares refinement. The current crystallographic R-value is 19.2% and 121 solvent molecules have so far been found associated with the protein. The structure is highly similar to the refined structure of human carbonic anhydrase II. Some differences in amino acid sequence and structure between the two isoenzymes are discussed. In BCA III, Lys 64 and Arg 91 (His 64 and Ile 91 in HCA II) are both pointing out from the active site cavity forming salt bridges with Glu 4 and Asp 72 (His 4 and Asp 72 in HCA II), respectively. However, Arg 67 and Phe 198 (Asn 67 and Leu 198 in HCA II) are oriented towards the zinc ion and significantly reduce the volume of the active site cavity. Phe 198 particularly reduces the size of the substrate binding region at the “deep water” position at the bottom of the cavity and we sugest that this is one of the major reasons for the differences in catalytic properties of isoenzyme III as compared to isozyme II. © 1993 Wiley-Liss, Inc.     

VARIABILITY IN NITRATE UPTAKE KINETICS IN THALASSIOSIRA PSEUDONANA (BACILLARIOPHYCEAE)1

Short-term (1–9 min) nitrate uptake kinetics were measured in Thalassiosira pseudonana (Hust.) Hasle & Heimdal grown in nitrate-limited, ammonium-limited, and nitrate-sufficient continuous cultures. For all cultures, maximal nitrate uptake rates did not develop until approximately 3 min after nitrate addition; thereafter, nitrate uptake rates remained constant or declined slightly. The K_s and V_max for the nitrate-limited cultures were higher at any growth rate than those for the ammonium-limited or nitrate-sufficient cultures. Thus, much higher nitrate concentrations would be required to saturate nitrate uptake in nitrate-limited Thalassiosira pseudonana than is usually considered necessary. The lack of data for other species grown under a range of environmental conditions makes it difficult to generalize about the effect of preconditioning on nitrate uptake kinetics.     

Assignment of aliphatic side-chain 1HN/15N resonances in perdeuterated proteins

Summary The perdeuteration of aliphatic sites in large proteins has been shown to greatly facilitate the process of sequential backbone and side-chain ¹³C assignments and has also been utilized in obtaining long-range NOE distance restraints for structure calculations. To obtain the maximum information from a 4D ¹⁵N/¹⁵N-separated NOESY, as many main-chain and side-chain ¹H_N/¹⁵N resonances as possible must be assigned. Traditionally, only backbone amide ¹H_N/¹⁵N resonances are assigned by correlation experiments, whereas slowly exchanging side-chain amide, amino, and guanidino protons are assigned by NOEs to side-chain aliphatic protons. In a perdeuterated protein, however, there is a minimal number of such protons. We have therefore developed several gradient-enhanced and sensitivity-enhanced pulse sequences, containing water-flipback pulses, to provide through-bond correlations of the aliphatic side-chain ¹H_N/¹⁵N resonances to side-chain ¹³C resonances with high sensitivity: NH₂-filtered 2D ¹H-¹⁵N HSQC (H₂N-HSQC), 3D H₂N(CO)C_/ and 3D H₂N(COC_/)C_/ for glutamine and asparagine side-chain amide groups; 2D refocused H(N_/)C_/ and H(N_/C_/)C_/ for arginine side-chain amino groups and non-refocused versions for lysine side-chain amino groups; and 2D refocused H(N)C and nonrefocused H(N_.)C for arginine side-chain guanidino groups. These pulse sequences have been applied to perdeuterated ¹³C-/¹⁵N-labeled human carbonic anhydrase II (²H-HCA II). Because more than 95% of all side-chain ¹³C resonances in ²H-HCA II have already been assigned with the C(CC)(CO)NH experiment, the assignment of the side-chain ¹H_N/¹⁵N resonances has been straightforward using the pulse sequences mentioned above. The importance of assigning these side-chain H_N protons has been demonstrated by recent studies in which the calculation of protein global folds was simulated using only ¹H_N-¹H_N NOE restraints. In these studies, the inclusion of NOE restraints to side-chain H_N protons significantly improved the quality of the global fold that could be determined for a perdeuterated protein [R.A. Venters et al. (1995) J. Am. Chem. Soc., 117, 9592–9593].To whom correspondence should be addressed.     

Food and water resources used by the Madagascan hissing-cockroach mite,Gromphadorholaelaps schaeferi

We determined the food source and water balance properties of the hissing-cockroach mite, Gromphadorholaelaps schaeferi. The food source for mites was identified using Evans blue dye by direct injection into a fasting host cockroach, Gromphadorhina portentosa, or by incorporation into cockroach food. No coloration was observed in mites on dye-injected cockroaches, but coloration was present in mites when only the food for the cockroaches had been stained. Thus, the mites are scavengers of cockroach food, and are not parasitic as previously thought. Our results demonstrate that the mites can absorb water from the air anywhere between 0.84 and 0.93 a _v (%RH/100), and wax-block experiments revealed that the mouth is the site of uptake. The mites are normally clumped together on the host, typically in between the cockroach's legs and around the spiracles. Water loss rates for mites in groups (0.16% h^-1) were far lower than for isolated mites (0.30% h^-1), suggesting a group effect with regard to water balance. Above the transition temperature of 30°C rate of water loss was rapid. The sites occupied by mites on the cockroach's body seem to be highly specific for feeding and absorption of water vapour.     

Carbon source utilization of soil extracted microorganisms as a tool to detect the effects of soil supplemented with genetically engineered and non-engineered Corynebacterium glutamicum and a recombinant peptide at the community level

Abstract: Substrate utilization of microbial cells extracted from soil with a 0.85% aqueous sodium chloride solution, was determined to estimate effects on soil microorganisms at the community level with microtiter plates (Biolog GN®) containing 95 different sources of organic carbon. A consistent pattern of utilized substrates was obtained after 24 h of microtiter plate incubation at 28°C. The absorbance values (OD₅₉₀) obtained from a microtiter plate reader after background correction were transformed by using the average absorbance values of oxidized substrates as a threshold to distinguish between well utilized and poorly or non-utilized substrates and thereby reduce variances between replicates. Doubling times of the extracted soil microorganisms in the microtiter plates were tested with 12 substrates and ranged from 1.96 h to 3.23 h, depending on the carbon source. The carbon source utilization assay was used to assess the effects of soil inoculation with Corynebacterium glutamicum with and without a genetically engineered plasmid (pUN1; 6.3 kb), which encoded for the synthesis of the mammalian protease inhibiting peptide, aprotinin. Additionally, aprotinin itself was added at two concentrations to soil samples. An identical decrease in the number of carbon sources utilized, especially carbohydrates, occurred upon soil inoculation with both C. glutamicum strains after inoculation with 10⁶ cells g⁻¹ soil. This effect was only detectable during the first three weeks of incubation, as long as cell numbers of C. glutamicum (pUN1) were above 10⁵ cfu g⁻¹. Soil amendment with aprotinin resulted in utilization of additional substrates, most of them carbohydrates. With 0.1 mg aprotinin g⁻¹ soil this stimulation lasted 2 days and with 10 mg g⁻¹ it lasted for 7 days.