Linking light attenuation and suspended sediment loading to benthic productivity within an Arctic kelp‐bed community1

Annual growth and productivity of kelp in the Stefansson Sound Boulder Patch, located along the Arctic coast of Alaska, is regulated almost entirely by PAR received during the summer open‐water period. Increased water turbidity during summer, often in response to storm activity, has been linked to low levels of ambient PAR and measurable decreases in kelp elongation. However, the relationship between PAR and water transparency has not been quantified, which compromises efforts to assess the effects of changing climate and weather conditions on kelp production. During the 2001–2002 summer periods, the inherent optical properties (IOPs) of Stefansson Sound waters were measured in conjunction with total suspended sediments (TSS) concentrations, which differed significantly between the 2 years, for input into a radiative transfer equation (RTE). In both years, the highest TSS levels (24.2 and 18.5 mg · L^?1 in 2001 and 2002, respectively) occurred in nearshore areas and were coincident with increased beam attenuations (13.8 and 8.3 m^?1). Lower TSS concentrations and attenuations were measured offshore. Data input to the RTE provided a TSS‐concentration‐specific attenuation coefficient that was used in a productivity model to estimate annual kelp productivities throughout the Boulder Patch based on modeled irradiance and averaged site‐specific TSS concentrations. Production estimates varied across the Boulder Patch but were lower in 2001 (0.12–0.34 g C · g dwt^?1 · year^?1, where dwt stands for dry weight) compared to 2002 (0.24–0.80 g C · g dwt^?1 · year^?1). Production in both years was greater in offshore locations with lower TSS loads. Results suggest that PAR availability during the summer is heavily influenced by TSS concentrations, and that changes in storm intensity and frequency, associated with current warming trends, may have significant effects on the primary production of these unique benthic algal communities.     

Growth variation in larval Makaira nigricans

The Atlantic blue marlin Makaira nigricans larvae were collected from Exuma Sound, Bahamas and the Straits of Florida over three summers (2000–2002). Sagittal otoliths were extracted and read under light microscopy to determine relationships between standard length ( L _S) and age for larvae from each year and location. Otolith growth trajectories were significantly different between locations: after the first 5–6 days of life, larvae from Exuma Sound grew significantly faster than larvae from the Straits of Florida. Exponential regression coefficients were similar among years for Exuma Sound larvae (mean instantaneous growth rate, G _L = 0·125), but differed between years for larvae from the Straits of Florida ( G _L = 0·086–0·089). Differences in larval growth rates between locations resulted in a 4–6 mm difference in L _S by day 15 of larval life. These differences in growth appeared to be unrelated to mean ambient water temperatures, and may have been caused by location‐specific differences in prey composition or availability. Alternatively, population‐specific differences in maternal condition may have contributed to these differences in early larval growth.     

Modeling the Impact of Oxygen Reaeration on Natural Attenuation

Based on studies of leaking petroleum storage tank (LPST) sites in Texas and California, the average plume of benzene, toluene, ethylene, and xylenes (BTEX) is between 61 and 132 m (200 and 400 ft) long. Standard modeling of BTEX plumes produces plumes well in excess of observed plume lengths. The amount of oxygen carried into the plume zone with clean upgradient water often is insufficient to account for the levels of biodegradation observed in these studies. Traditional recharge of oxygen-containing water into an aquifer adds insufficient oxygen to the system and cannot account for the observed plume lengths. Research has shown that anaerobic processes can contribute to biodegradation in certain cases; however, anaerobic pathways are not included in this work. Reaeration of oxygen-depleted aquifers by diffusive transport of oxygen through the vadose zone has generally been neglected as a way to introduce oxygen into surficial aquifers. The observed plume lengths and preliminary laboratory results indicate that this source of oxygen should be accounted for in any natural attenuation model of BTEX contamination. This approach to modeling reaeration has been incorporated into the finite-element groundwater flow and contaminant transport code, FLOTRAN. Adding diffusion-driven reaeration to the modeling process produces BTEX plumes consistent with observed plume lengths.     

MONITORING THE TREND OF HARBOR SEALS IN PRINCE WILLIAM SOUND,ALASKA, AFTER THE EXXON VALDEZ OIL SPILL

We used aerial counts to monitor the trend in numbers of harbor seals, Phoca vitulina richardsi, in Prince William Sound, Alaska, following the 1989 Exxon Valdez oil spill. Repetitive counts were made at 25 haul-out sites during the annual molt period each year from 1990 through 1997. A generalized linear model indicated that time of day, date, and time relative to low tide significantly affected seal counts. When Poisson regression was used to adjust counts to a standardized set of survey conditions, results showed a highly significant decline of 4.6% per year. Unadjusted counts indicated a slight, but not statistically significant, decline in the number of seals. The number of harbor seals on the trend-count route in eastern and central PWS has been declining since at least 1984, with an overall population reduction of 63% through 1997. Programs to monitor long-term changes in animal population sizes should account for factors that can cause short-term variations in indices of abundance. The inclusion of such factors as covariates in models can improve the accuracy of monitoring programs.     

大鹰鹃鸣声的日节律

鸟类的鸣唱具有吸引配偶和保卫领域的功能,多为雀形目雄性鸟类发出,在其婚配、繁殖中起重要作用。非雀形目鸟类缺乏内鸣肌,发出的声音较为单调。但杜鹃科(Cuculidae)等少数非雀形目鸟类,利用鸣叫来吸引异性和宣示领域,功能上类似雀形目鸟类的鸣唱。鸟类在繁殖期面临觅食等基本生理活动与求偶行为的时间权衡。而鸣唱是雄性鸟类在繁殖期耗能较多的求偶行为,鸣唱的活跃程度受到外界环境和鸟类自身习性的影响。通过研究鸟类鸣声的日节律,有助于了解鸟类对生活史策略的响应。本研究于2016年和2017年鸟类繁殖季在北京小龙门森林公园(40°00′N,115°26′E)进行。2016年和2017年在大鹰鹃(Hierococcyx sparverioides)活动区利用录音机(美国Wildlife Acoustics公司,型号SM4)分别录制了3 d和43 d的录音。通过Kaleidoscope Pro 4.0.3软件(美国Wildlife Acoustics公司),量化录音并提取反应大鹰鹃鸣声特征的参数,进而自动识别出录音中大鹰鹃的鸣声。在优化识别条件后,对大鹰鹃鸣声识别的正确率可以达到60.26%,探测率可以达到44.71%。发现大鹰鹃有两个鸣叫的高峰,一个在3:00时,另一个在19:00时。与同域分布的其他鸟类相比,大鹰鹃鸣声的高峰时段持续的时间更长,且具有夜间鸣叫的特点。结合大鹰鹃的生活史,我们对其鸣声日节律进行了讨论。     

Investigation of optical attenuation imaging using optical coherence tomography for monitoring of scars undergoing fractional laser treatment

We demonstrate the use of the near‐infrared attenuation coefficient, measured using optical coherence tomography (OCT), in longitudinal assessment of hypertrophic burn scars undergoing fractional laser treatment. The measurement method incorporates blood vessel detection by speckle decorrelation and masking, and a robust regression estimator to produce 2D en face parametric images of the attenuation coefficient of the dermis. Through reliable co‐location of the field of view across pre‐ and post‐treatment imaging sessions, the study was able to quantify changes in the attenuation coefficient of the dermis over a period of ～20 weeks in seven patients. Minimal variation was observed in the mean attenuation coefficient of normal skin and control (untreated) mature scars, as expected. However, a significant decrease (13 ± 5%, mean ± standard deviation) was observed in the treated mature scars, resulting in a greater distinction from normal skin in response to localized damage from the laser treatment. By contrast, we observed an increase in the mean attenuation coefficient of treated (31 ± 27%) and control (27 ± 20%) immature scars, with numerical values incrementally approaching normal skin as the healing progressed. This pilot study supports conducting a more extensive investigation of OCT attenuation imaging for quantitative longitudinal monitoring of scars.

En face 2D OCT attenuation coefficient map of a treated immature scar derived from the pre‐treatment (top) and the post‐treatment (bottom) scans. (Vasculature (black) is masked out.) The scale bars are 0.5 mm.     

Spectral attenuation of brain and retina tissues in the near‐infrared range measured using a fiber‐based supercontinuum device

A novel setup for the efficient constant optical measurements of biological tissues in the near infrared is presented. The system combines the use of a fiber‐based supercontinuum source with a simple optics fiber collimator. This configuration allows a wide spectral range of measurement and, at the same time, can efficiently filter the straightforward transmitted light while avoiding scattered light. As a performance example, the optical characterization of rat brain and retina tissues are shown. The attenuation coefficient for both tissues in the near infrared region is also obtained. This technique could be applied in clinical research as a noninvasive method with several potential practical applications.     

Local site differences in survival and parasitism of periwinkles (Littorina sitkana Philippi, 1846)

The periwinkle, Littorina sitkana, is found throughout the intertidal zone, often in isolated subpopulations. The majority of trematode parasites use snails as intermediate hosts, and decreased survivorship is often observed in snails infected with trematodes. Sampling L. sitkana from four sites in Barkley Sound, British Columbia, Canada, we test the effects of parasitic infection on snail survival using maximum likelihood and Bayesian approaches using the software MARK and WinBUGS. We found that survival of periwinkles and trematode community composition differed among sites, but survival and trematode prevalence were uncorrelated. WinBUGS performed better than MARK in two ways: (1) by allowing the use of information on known mortality, thus preventing survival overestimation; and (2) by giving more stable estimates while testing the effect of body size on snail survival. Our results suggest that snail survival depends heavily on local environmental factors that may vary greatly within a small geographical region. These findings are important because the majority of experimental studies on survival are done on snails from a single location.     

Production of acoustic signals during aggression in Coosa bass, <Emphasis Type="Italic">Micropterus coosae</Emphasis>

Although sound production has been described for sunfishes, it is previously unknown for basses, both groups of fishes in the family Centrarchidae. We document production of acoustic signals during aggressive encounters in Coosa bass, Micropterus coosae. During dyadic encounters, presumptive winners of contests produced sounds associated with a variety of behaviors, including chases, lateral displays, circle swims, nudging, jerking and during post aggression, while fish were stationary. These sounds are low-frequency, non-harmonic and consist of one to 41 separate pulses. In most trials larger fish won contests, regardless of territory ownership (which fish was put into the test tank first) and size difference.