Connecting species’ geographical distributions to environmental variables: range maps versus observed points of occurrence

Connecting the geographical occurrence of a species with underlying environmental variables is fundamental for many analyses of life history evolution and for modeling species distributions for both basic and practical ends. However, raw distributional information comes principally in two forms: points of occurrence (specific geographical coordinates where a species has been observed), and expert-prepared range maps. Each form has potential short-comings: range maps tend to overestimate the true occurrence of a species, whereas occurrence points (because of their frequent non-random spatial distribution) tend to underestimate it. Whereas previous comparisons of the two forms have focused on how they may differ when estimating species richness, less attention has been paid to the extent to which the two forms actually differ in their representation of a species’ environmental associations. We assess such differences using the globally distributed avian order Galliformes (294 species). For each species we overlaid range maps obtained from IUCN and point-of-occurrence data obtained from GBIF on global maps of four climate variables and elevation. Over all species, the median difference in distribution centroids was 234 km, and median values of all five environmental variables were highly correlated, although there were a few species outliers for each variable. We also acquired species’ elevational distribution mid-points (mid-point between minimum and maximum elevational extent) from the literature; median elevations from point occurrences and ranges were consistently lower (median −420 m) than mid-points. We concluded that in most cases occurrence points were likely to produce better estimates of underlying environmental variables than range maps, although differences were often slight. We also concluded that elevational range mid-points were biased high, and that elevation distributions based on either points or range maps provided better estimates.     

Hyaluronate supports hESC‐cardiomyocyte cell therapy for cardiac regeneration after acute myocardial infarction

IntroductionEnormous progress has been made in cardiac regeneration using human embryonic stem cell‐derived cardiomyocyte (hESC‐CM) grafts in pre‐clinical trials. However, the rate of cell survival has remained very low due to anoikis after transplantation into the heart as single cells. Numerous solutions have been proposed to improve cell survival, and one of these strategies is to co‐transplant biocompatible materials or hydrogels with the hESC‐CMs.MethodsIn our study, we screened various combinations of biomaterials that could promote anoikis resistance and improve hESC‐CM survival upon co‐transplantation and promote cardiac functional recovery. We injected different combinations of Matrigel, alginate and hyaluronate with hESC‐CM suspensions into the myocardium of rat models with myocardial infarction (MI).ResultsOur results showed that the group treated with a combination of hyaluronate and hESC‐CMs had the lowest arrhythmia rates when stimulated with programmed electrical stimulation. While all three combinations of hydrogel‐hESC‐CM treatments improved rat cardiac function compared with the saline control group, the combination with hyaluronate most significantly reduced pathological changes from left ventricular remodelling and improved both left ventricular function and left ventricular ejection fraction by 28 days post‐infarction.ConclusionHence, we concluded that hyaluronate‐hESC‐CM is a superior combination therapy for promoting cardiac regeneration after myocardial infarction.     

消痰化瘀利窍中药组方对改善慢性间歇性低氧大鼠心肌纤维化的作用及其机制*

目的: 探讨转化生长因子-β(TGF-β)信号通路在消痰化瘀利窍中药组方(XC)对改善慢性间歇性低氧(CIH)大鼠心肌纤维化中的作用。方法: 40只SD 大鼠,随机分为常氧组(Normoxia)、常氧+中药干预组(TCMC)、慢性间歇性低氧模型组(CIH)、CIH +中药干预组(TCMC+CIH),每组10只。通过向舱内充入氮气,使舱内氧体积分数在90 s内从21%下降到9%,随后90 s再充氧气使舱内氧体积分数逐渐上升到21%为一循环建立CIH模型。CIH 与 TCMC+CIH 组大鼠置于CIH装置, Normoxia 和TCMC组大鼠置于正常氧舱。此外TCMC+CIH 与 TCMC 组大鼠于每日XC生药(24 g/kg)煎制灌胃,而 CIH 组与 Normoxia 组大鼠给予等体积生理盐水。造模结束后,天狼星红染色观察大鼠心肌间质内胶原沉积情况;Western blot 法检测大鼠心肌间质中 CollagenⅠ、Collagen Ⅲ、Fibronectin、TGF-β、p-Smad2、p-Smad3的蛋白表达水平。采用Q-PCR法检测基质金属蛋白酶2(MMP-2)和基质金属蛋白酶抑制因子 2 (TIMP-2) 的 mRNA表达水平。结果: 与正常组比较,CIH大鼠心肌组织出现明显胶原的沉积,CollagenⅠ、Collagen Ⅲ和Fibronectin蛋白表达明显增多(P均＜0.01),TGF-β、p-Smad2、p-Smad3蛋白表达水平也明显增高(P均＜0.01);CIH大鼠心肌组织TIMP-2 mRNA上调导致MMP-2 mRNA明显减少(P均＜0.01)。给予XC干预后,CIH大鼠心肌组织胶原沉积明显减少,CollagenⅠ、Collagen Ⅲ和Fibronectin蛋白表达明显降低(P＜0.05,P＜ 0.01,P＜0.05);CIH大鼠心肌组织中TGF-β、p-Smad2、p-Smad3蛋白表达水平明显降低(P＜0.01,P＜0.05,P＜ 0.01)。心肌组织中TIMP-2明显基因减少致MMP-2增多(P均＜0.05)。 结论: 消痰化瘀利窍中药组方可抑制CIH大鼠心肌纤维化的形成,进而改善CIH大鼠心肌功能。其机制与该中药组方下调TGF-β/ Smad2/3信号通路及下调TIMP-2mRNA有关。     

澜沧江流域水生昆虫群落分类多样性和功能多样性海拔格局的空间尺度依赖性

群落分类多样性和功能多样性的海拔格局研究, 是了解生物多样性空间分布现状、揭示多样性维持和变化机制的重要途径。当前对水生昆虫分类多样性和功能多样性沿海拔梯度分布格局, 及其尺度依赖性依旧缺乏深入研究。本文基于2013-2018年在云南澜沧江流域500-3,900 m海拔梯度共149个溪流点位的水生昆虫群落调查数据, 利用线性或二次回归模型探索并比较了局部尺度(点位尺度)和不同区域尺度(100 m、150 m、200 m、250 m海拔段)的分类多样性指数(物种丰富度指数、Simpson多样性指数和物种均匀度指数)和功能多样性指数(树状图功能多样性指数(dbFD)、Rao二次熵指数(RaoQ)和功能均匀度指数(FEve))的海拔格局。结果表明, 在局部尺度, 物种丰富度指数和dbFD指数沿海拔梯度均无显著分布特征, Simpson多样性指数、RaoQ指数、物种均匀度指数和FEve指数沿海拔梯度呈现U型或者单调递减趋势。在区域尺度, 随着区域海拔带宽度的增加, 物种丰富度指数沿海拔呈不显著的单调递减格局, 但dbFD指数沿海拔分布由U型转变为单调递减趋势; Simpson多样性指数和RaoQ指数沿海拔梯度由显著U型趋势转变为无显著分布特征; 物种均匀度指数沿海拔梯度无显著分布特征, 但FEve指数呈显著增加的海拔格局。综上, 群落分类多样性指数和功能多样性指数沿海拔梯度分布存在局部和区域尺度的空间差异, 但区域尺度下二者海拔格局随海拔带宽度的增加存在一定程度的一致性。     

急性脑梗死并发肺部感染患者预后及危险因素分析

目的分析急性脑梗死并发肺部感染患者病原菌分布、病原菌耐药性、患者用药特征及其危险因素。方法选取2015年3月至2017年3月在我院急诊科进行住院治疗,且年龄60岁的急性脑梗死并发肺部感染患者60例为研究对象,对患者的一般资料及病原菌分布情况、耐药情况和患者用药情况进行分析。结果 60例患者中有30例出现肺部感染,感染率为50.00%。肺部感染患者中死亡4例。肺部感染患者痰液中共培养出28株病原菌,其中革兰阴性菌21株,革兰阳性菌5株,真菌2株。30例肺部感染患者共使用6种抗感染药物,其中哌拉西林/舒巴坦的使用频率最高,其次为依替米星及美罗培南。Logistic回归分析显示,病原菌分布、耐药情况和患者用药情况与患者的预后存在相关性。结论急性脑梗死并发肺部感染患者的病原菌分布、耐药情况及患者用药情况与患者的预后密切相关,应针对上述因素给予患者合理的治疗。     

Best environmental predictors of breeding phenology differ with elevation in a common woodland bird species

Temperatures in mountain areas are increasing at a higher rate than the Northern Hemisphere land average, but how fauna may respond, in particular in terms of phenology, remains poorly understood. The aim of this study was to assess how elevation could modify the relationships between climate variability (air temperature and snow melt‐out date), the timing of plant phenology and egg‐laying date of the coal tit (Periparus ater). We collected 9 years (2011–2019) of data on egg‐laying date, spring air temperature, snow melt‐out date, and larch budburst date at two elevations (~1,300 m and ~1,900 m asl) on a slope located in the Mont‐Blanc Massif in the French Alps. We found that at low elevation, larch budburst date had a direct influence on egg‐laying date, while at high‐altitude snow melt‐out date was the limiting factor. At both elevations, air temperature had a similar effect on egg‐laying date, but was a poorer predictor than larch budburst or snowmelt date. Our results shed light on proximate drivers of breeding phenology responses to interannual climate variability in mountain areas and suggest that factors directly influencing species phenology vary at different elevations. Predicting the future responses of species in a climate change context will require testing the transferability of models and accounting for nonstationary relationships between environmental predictors and the timing of phenological events.     

Seed quality and seed quantity in red maple depends on weather and individual tree characteristics

Under future climate change, plant species are expected to shift their ranges in response to increasing temperatures and altered precipitation patterns. As seeds represent the single opportunity for plants to move, it is critical to quantify the factors that influence reproduction. While total seed production is clearly important, seed quality is equally as critical and often overlooked. Thus, to quantify how environmental and tree‐level characteristics affect seed quality and quantity, the reproductive output of red maple (Acer rubrum) was measured along an elevation gradient in the Monongahela National Forest, WV. A variety of individual‐level characteristics were measured (e.g., DBH, canopy area, height, and tree cores were taken to quantify growth), and seed traps were placed under seed‐bearing trees to collect samaras and quantify total seed production. A random subsample of collected seeds from each tree was micro‐CT scanned to determine embryo volume, photographed for morphology measurements, and used for germination trials. The number of seeds produced was negatively affected by frost events during flowering, and stand density. The trees with the most seeds also showed reduced growth in recent years. Only 63% of scanned seeds showed embryo development, and of those seeds—only 23% germinated. The likelihood of embryo presence increased as growth rate decreased, while embryo size increased with tree height, smaller DBH, and in areas dominated by hemlock. Both larger embryo volume and larger overall seed size increased the likelihood of germination. The results highlight the importance of including seed quality in addition to seed quantity for a more complete representation of reproductive output.     

Role of B lymphocytes in the infarcted mass in patients with acute myocardial infarction

Despite early reperfusion, patients with ST segment elevation myocardial infarction (STEMI) may present large myocardial necrosis and significant impairment of ventricular function. The present study aimed to evaluate the role of subtypes of B lymphocytes and related cytokines in the infarcted mass and left ventricular ejection fraction obtained by cardiac magnetic resonance imaging performed after 30 days of STEMI. This prospective study included 120 subjects with STEMI submitted to pharmacoinvasive strategy. Blood samples were collected in subjects in the first (D1) and 30th (D30) days post STEMI. The amount of CD11b+ B1 lymphocytes (cells/ml) at D1 were related to the infarcted mass (rho = 0.43; P=0.033), measured by cardiac MRI at D30. These B1 cells were associated with CD4+ T lymphocytes at D1 and D30, while B2 classic lymphocytes at day 30 were related to left ventricular ejection fraction (LVEF). Higher titers of circulating IL-4 and IL-10 were observed at D30 versus D1 (P=0.013 and P<0.001, respectively). Titers of IL-6 at D1 were associated with infarcted mass (rho = 0.41, P<0.001) and inversely related to LVEF (rho = −0.38, P<0.001). After multiple linear regression analysis, high-sensitivity troponin T and IL-6 collected at day 1 were independent predictors of infarcted mass and, at day 30, only HDL-C. Regarding LVEF, high-sensitivity troponin T and high-sensitivity C-reactive protein were independent predictors at day 1, and B2 classic lymphocytes, at day 30. In subjects with STEMI, despite early reperfusion, the amount of infarcted mass and ventricular performance were related to inflammatory responses triggered by circulating B lymphocytes.     

攀枝花不同海拔高度烤烟农田红壤中氨氧化细菌与氨氧化古菌的群落结构分析

为探究攀枝花干热河谷区农田土壤氨氧化古菌（Ammonia oxidizing archaea,AOA）与氨氧化细菌（Ammonia oxidizing bacteria,AOB）群落对海拔高度的响应特征,深入认识该区域的氮素循环过程。以攀枝花米易县不同海拔（1600 m、1800 m和2000 m）农田红壤为研究对象,运用化学分析和末端限制性片段长度多态性（Terminal restriction fragment length polymorphism,T-RFLP）分别测定土壤理化性质、AOA和AOB群落组成及多样性,研究不同海拔农田土壤中AOA和AOB群落变异及其驱动因子。研究结果显示,不同海拔农田土壤pH均小于7,土壤有机碳（SOC）、全氮（TN）、速效钾（AK）和铵态氮（NH₄⁺-N）含量随海拔升高而降低,碱解氮（AN）、有效磷（AP）和硝态氮（NO₃^--N）含量随海拔升高先增加后降低;随海拔升高,AOA群落多样性指数增加,而AOB群落多样性指数先增加后降低;AOA以亚硝基球菌属（Nitrososphaera）为优势菌群,AOB以亚硝化螺菌属（Nitrosospira）为优势菌群;土壤有机碳（SOC）、速效钾（AK）和硝态氮（NO₃^--N）是影响该区域农田土壤AOA和AOB群落发育的主要因子。总体而言,攀枝花干热河谷区不同海拔农田土壤AOA和AOB群落结构变化明显,土壤硝态氮、速效钾和有机碳是影响AOA和AOB群落结构变异的主要因子;研究结果可为揭示干热河谷区农田红壤氮循环相关微生物的海拔分布格局提供理论依据。