Scuba diving damage on coralligenous builders: Bryozoan species as an indicator of stress

The effects of scuba diving activities on coralligenous concretions builders in the Mediterranean Sea are reported for a non-marine protected area (non-MPA). Five erect bryozoan species, which are particularly vulnerable due to their fragile structure, were investigated: Adeonella calveti, Myriapora truncata, Pentapora fascialis, Reteporella grimaldii, and Smittina cervicornis. These species were sampled at frequently and rarely visited diving sites to the maximum depths reachable with the most common recreational diving certifications (i.e., 40 m). To do this, a non-destructive photographic sampling technique was used to minimize any impact on the benthic communities. For each sample, the number of colonies, their width, coverage, type of injury and degree of exposure were quantified using image analysis software. The number of species differed between the frequently and rarely visited diving sites, and frequently visited sites had significantly lower number of colonies and reduced colony width. Species-specific response to stress was associated with colony morphology and skeleton rigidity. Both the type of injury and colony position within the coralligenous habitat were affected by the presence of scuba divers. A linear model was proposed to analyse the response of bryozoans to scuba diving pressure. The results reported here suggest that P. fascialis and R. grimaldii could serve as robust species indicators of diving stress.     

Are island‐like systems biologically similar to islands? A review of the evidence

Islands are geographically defined as land masses completely surrounded by water, and island systems have been used as models for many biogeographic, ecological, and evolutionary theories ever since Darwin's pioneering efforts. However, their biological definition is complex. Over the past few decades these theories have been applied to many study systems that only share some geographic features with island systems. These features include spatial fragmentation, limited area, spatial and temporal isolation from adjacent parts of the system, and low connectivity between different parts within the system, to mention just a few. These systems vary in their form, the matrix that surrounds them, the factors defining their borders, the extent of insularity they impose on the different taxa, and their geological similarity to different types of actual islands. Here, I seek to understand whether such island‐like systems (ILS) function biologically as true islands. In the first part, I describe the wide diversity of ILS suggested in the literature and the variation in the features that define their insularity. In the second part, I review the extent to which the main theories of island biology are applicable to these systems: species–area and species–isolation relationships, community composition, evolutionary radiations, and the extent of endemism and genetic diversity. In the third and final part, I suggest a new conceptual framework within which to classify and study the biology of ILS, as well as practical future research directions. I conclude that the term ‘biological island’ is a multi‐faceted concept, loosely related to its geographical definition. As ILS are often less isolated than true islands, and their biological patterns are only partly similar to those of true islands (and even this is true only for some ILS) the use of the term ‘island’ to describe any isolated habitat is therefore inappropriate.     

To be or not to be native: From the discourse on the official status of Salix alba to the recommendation to strengthen the protection of marginal populations in Latvia,with notes to related taxa

In Europe, Salix euxina is considered to be an adventive species, while S. alba is regarded as native. When assessing the protection of species in wild habitats, it is important to know the status of each species so that not to protect unreasonably alien species. Analysing the sources of literature, it was noticed that the views of Latvian authors differed — both on the status of the indigenous S. alba, as well as the adventive S. euxina. Research has shown that the ‘official status’ assigned to both basic species on the national level differs and contradicts the scientifically recognized status. This is an interesting case when certain state institutions responsible for nature protection have officially recognized a native species as an alien one and an alien species as a native one through laws and regulations. Considering that there are marginal populations of S. alba of the natural distribution range in Latvia, the most valuable of which occur in the basin of the River Gauja, the current possible protection of S. alba on the national level was analysed. Analysing the legislation, it has been established that rare habitats with S. alba woods (Salicetum albae) on alluvial soils of river flats are also included among the specially protected habitats. Analysing the individual protection regulations of the two largest specially protected areas, i. e. the Protected Landscape Area of the Northern Gauja and the Gauja National Park, it has been concluded that the current protection regime in the country does not ensure full protection of marginal populations of S. alba in natural habitats. This is because the individual protection regulations do not include the specific protected habitats of Salicetum albae and allow the felling of young willows, which contradicts the provisions of the legal act on the structural elements of the habitat Salicetum albae. In order to ensure full protection of marginal populations of S. alba and special habitats formed by the species in Latvia, it is necessary to update and define more accurately the laws and regulation on its protection.     

异质生境对荒漠草原植物群落组成和种群生态位的影响

为揭示荒漠草原不同植物种群生态位特征以及对有限资源的利用状况,以围栏内外不同土壤类型下植物群落为研究对象,运用经典生态位理论,探讨其群落组成和种群生态位特征。结果表明：在调查样方中共记录到15科36属42种植物,以豆科、禾本科、菊科和藜科的草本植物为主。风沙土生境中的植被生物量和密度最高,一年生植物生态位宽度值往往较高,以猪毛蒿的重要值最大。灰钙土生境中植被盖度较高,多年生植物生态位宽度值相对较高,以牛枝子和针茅的重要值最大。放牧会减少多年生草本的种类和数量,而一年生草本有所增加,对半灌木数量则影响不大。在不同生境下猪毛蒿生态位宽度和总宽度值均居首,是该区域主要优势种和典型的泛化种。在放牧和短期围栏内猪毛蒿与其他物种的生态位重叠指数均较高,但在长期围封样地中,特别是灰钙土生境下,重叠指数比重有所降低。基岩风化沉积土中物种间的重叠程度最大,而风沙土中则最小。猪毛蒿分布在生态位重叠指数DCA排序图的中心,说明其在群落中占有重要地位,对有限资源的竞争能力和对环境的适应能力较强。综上,生境的异质性是导致群落组成及生态位不同的关键因子,因此在荒漠草原进行植被恢复建设和保护措施时,应考虑不同土壤类型条件下各物种生态适应性,避免生态位功能冲突。     

A New Halophilic Heterolobosean Flagellate,Aurem hypersalina gen. n. et sp. n., Closely Related to the Pleurostomum‐Tulamoeba Clade: Implications for Adaptive Radiation of Halophilic Eukaryotes

Halophilic protozoa are independently scattered across the molecular phylogeny of eukaryotes; most of which are assigned to Heterolobosea. Here, we isolated a biflagellate from a hypersaline water of 342‰ salinity. This isolate shared several morphological features with typical halophilic heterolobosean flagellates. In addition, molecular phylogenetic trees of the 18S rRNA gene sequences clearly indicated flagellate is a heterolobosean species closely related to the halophilic Tulamoebidae. However, the flagellate was not accommodated to any described genus. Cells were ovoid‐shaped, and no amoebae were observed. The two unequal flagella beat heterodynamically. An ear‐like bulge at the margin of a cytostomal groove was observed. Flagellates could grow at 100–200‰ salinity, suggesting an obligately halophilic species. Currently, it appears that the new halophilic Aurem hypersalina forms a strong clade with Tulamoebidae, and is sister to the Tulamoebidae, indicating that this new clade is composed almost entirely of obligate halophilic taxa. Thus, A. hypersalina and the Tulamoebidae clade currently represent a unique adaptive radiation of halophilic eukaryotes.     

Towards alien plant prioritization in Italy: methodological issues and first results

In recent decades, multiple actions have been taken to counteract the relentless expansion of invasive alien species as well as to gain a better understanding of their effects on ecosystems. Here, we describe the approach designed by the Italian Botanical Society that is aimed at selecting a list of candidate alien plants to be subjected to a prioritization procedure. We selected a total of 96 species on the basis of data related to their occurrence on both a national and regional scale, their invasiveness and their potential to invade plant communities and/or habitats of community concern. This list represents the first result obtained by applying this standardized workflow and is a first step towards the identification of those alien species that should be included in the national list according to Regulation (EU) n. 1143/2014.     

Viruses in extreme environments

The tolerance limits of extremophiles in term of temperature, pH, salinity, desiccation, hydrostatic pressure, radiation, anaerobiosis far exceed what can support non-extremophilic organisms. Like all other organisms, extremophiles serve as hosts for viral replication. Many lines of evidence suggest that viruses could no more be regarded as simple infectious “fragments of life” but on the contrary as one of the major components of the biosphere. The exploration of niches with seemingly harsh life conditions as hypersaline and soda lakes, Sahara desert, polar environments or hot acid springs and deep sea hydrothermal vents, permitted to track successfully the presence of viruses. Substantial populations of double-stranded DNA virus that can reach 10⁹ particles per milliliter were recorded. All these viral communities, with genome size ranging from 14 kb to 80 kb, seem to be genetically distinct, suggesting specific niche adaptation. Nevertheless, at this stage of the knowledge, very little is known of their origin, activity, or importance to the in situ microbial dynamics. The continuous attempts to isolate and to study viruses that thrive in extreme environments will be needed to address such questions. However, this topic appears to open a new window on an unexplored part of the viral world. Marc Le Romancer and Mélusine Gaillard contributed equally to this work.     

Do not neglect surroundings in restoration of disturbed sites

We examined the influence of surroundings, i.e. proximity effects, on the course of spontaneous vegetation succession using two data sets. In the first data set, we tested the effects of surrounding vegetation (woodlands, wetlands, grasslands, and synanthropic) on succession in various disturbed habitats in the Czech Republic by comparing successional sites with more natural vegetation within 100 m and at 1 km from each site. The habitats included old fields, gravel‐sand pits, spoil heaps from black coal mining, industrially extracted peatlands, and acidic stone quarries. We found that, with the exception of wetlands, the influence of the vegetation types on seral vegetation was nearly always significant using marginal and partial Canonical Correspondence Analyses. In the second data set, which included 27 limestone quarries, we compared species lists outside (up to 100 m apart) and inside the quarries using Detrended Correspondence Analysis and the Sørensen similarity index. We found much higher species similarity between outside and inside particular limestone quarries than among the quarries themselves and among their surroundings, which also indicates that the seral vegetation is decisively influenced by the surroundings. We argue that restoration ecologists should carefully consider the nature of the surroundings of disturbed sites because of its profound impact on restoration processes. They should conduct inventories and prescribe some restoration measures not only inside a restored site, but also in its surroundings.     

啮齿动物捕食压力下生境类型和覆盖处理对辽东栎种子命运的影响

在六盘山区的退化辽东栎灌丛和辽东栎次生林 (以下分别称“灌丛样地“和“次生林样地”),研究了群落生境和清除凋落物、凋落物覆盖及土壤覆盖等处理对啮齿动物取食和搬运/贮藏辽东栎种子的影响。结果表明：(1) 凋落物和土壤覆盖处理在种子释放的前期阶段有利于种子留存,但释放40天后,种子在释放点的最终留存率在灌丛样地显著高于次生林样地 (Z = -2.333, P = 0.020)。灌丛样地的自然状态的种子最终留存率显著高于凋落物覆盖处理 (Z = -0.674,P = 0.05),但其它处理间无显著差异;次生林样地的凋落物覆盖和清除凋落物处理种子的最终留存率为0%,自然状态和土壤覆盖处理均不足1%,各处理间无显著差异。(2) 种子被啮齿动物的就地取食率在不同群落生境间差异显著 (Z = -2.333,P = 0.020);在灌丛样地,凋落物覆盖处理种子被啮齿动物就地取食率最高 (45.56%),而次生林样地的土壤覆盖处理最高 (64.81%),种子被啮齿动物就地取食率在灌丛样地和次生林样地均为清除凋落物处理最低 (分别为23.70%和40.00%);生境类型和覆盖处理对种子搬运后的取食率均无显著影响。(3) 次生林样地种子被啮齿动物搬运后的埋藏率显著高于灌丛样地 (Z = -2.88,P = 0.004);在灌丛样地,土壤覆盖处理种子搬运后的埋藏率最高仅5.56%,而在次生林样地,清除凋落物处理最高达9.26%。(4) 种子被啮齿动物搬运后取食的距离在灌丛样地和次生林样地分别为3.01 m和2.13 m,差异显著 (Z = -2.080,P = 0.038),而种子搬运后的埋藏距离前者小于后者 (分别为1.35 m和2.10 m),两者间差异不显著。     

Algal Assemblages in Multiple Habitats of Restored and Extant Wetlands

The functional and structural attributes of algal assemblages were studied in 25 restored and 20 extant depressional wetlands in southern central Michigan. Environmental conditions and algal assemblages were compared between restored and extant wetlands and among habitats within wetlands. Restored marshes generally had lower shading by macrophytes, nutrient concentrations, and sediment organic matter. Relative biovolume of non-diatom algae was significantly different among plankton, macrophyte and sediment habitats in restored wetlands, but did not differ between macrophytes and sediments in extant wetlands. Species composition of diatom assemblages was not significantly different between plants and sediments in both restored and extant wetlands. The observed differences in non-diatom algae could not be attributed to any measured environmental variable; however, diatom assemblage differences between habitats increased with light irradiance. Differences in sediment diatom assemblages were observed between restored and extant wetlands and were related to differences in nutrients, pH, and canopy cover. Differences were also observed between epiphytic diatom assemblages in restored and extant wetlands and they were related to light and dissolved oxygen. In summary, differences in light and nutrient availability were the main environmental factors differentiating algal communities in wetlands.