鼎湖山植物群落α多样性与环境的关系

用样带取样法,来研究不同取样尺度和不同取样尺度条件下的多个环境因子与鼎湖山植物群落α多样性的关系.取样尺度分别为10、20、40、80m和160m.涵盖鼎湖山主要的植被类型：季风常绿阔叶林、针阔混交林、沟谷常绿阔叶林和针叶林.相关分析和主成分分析结果表明,环境因子对各层次的α多样性的影响程度各不相同,达到显著相关性的取样尺度也不一样,表现出较大的复杂性,同时也表明样带上的环境异质性较高.因此,用海拔梯度作为主要的环境梯度来研究鼎湖山植物群落多样性具有合理性.海拔高度与乔木层多样性的关系在所有取样尺度上都较密切,这说明海拔高度可能是影响乔木层α多样性的最重要环境因子.     

香溪河官庄坪库湾叶绿素a 及初级生产力的分布特征

2005年2月—4月对三峡库区香溪河进行了定点初级生产力及相关影响因子的研究,分析了官庄坪库湾叶绿素a含量和初级生产力的时空分布特征。结果表明,叶绿素a含量、初级生产力在各水层的变化具有相同的周期性,均存在5个峰值,平均每个周期为7—10d左右,但两者不同步。官庄坪测站的真光层深度为10m左右,介于湖泊与海洋之间,光补偿点为4—5m。初级生产力最大值出现在水下0.5m处,并沿物理深度逐渐降低;叶绿素a含量最大值则出现在水下2m处。水温的垂直变化在后期差异明显,各水层日平均水温增量(ΔT/d)与平均毛初级生产、净初级生产存在极显著的相关性。     

Key role of coulombic interactions for the folding transition state of the cold shock protein

The cold shock protein CspB shows a five-stranded beta-sheet structure, and it folds rapidly via a native-like transition state. A previous Phi value analysis showed that most of the residues with Phi values close to one reside in strand beta1, and two of them, Lys5 and Lys7 are partially exposed charged residues. To elucidate how coulombic interactions of these two residues contribute to the energetic organisation of the folding transition state we performed comparative folding experiments in the presence of an ionic denaturant (guanidinium chloride) and a non-ionic denaturant (urea) and a double-mutant analysis. Lys5 contributes 6.6 kJ mol(-1) to the stability of the transition state, and half of it originates from screenable coulombic interactions. Lys7 contributes 5.3 kJ mol(-1), and 3.4 kJ mol(-1) of it are screened by salt. In the folded protein Lys7 interacts with Asp25, and the screenable coulombic interaction between these two residues is fully formed in the transition state. This suggests that long-range coulombic interactions such as those originating from Lys5 and Lys7 of CspB can be important for organizing and stabilizing native-like structure early in protein folding.     

In vitro evolution of a hyperstable Gbeta1 variant

An in-vitro selection strategy was used to obtain strongly stabilized variants of the beta1 domain of protein G (Gbeta1). In a two-step approach, first candidate positions with a high potential for stabilization were identified in Gbeta1 libraries that were created by error-prone PCR, and then, after randomization of these positions by saturation mutagenesis, strongly stabilized variants were selected. For both steps the in-vitro selection method Proside was employed. Proside links the stability of a protein with the infectivity of a filamentous phage. Ultimately, residues from the two best selected variants were combined in a single Gbeta1 molecule. This variant with the four mutations E15V, T16L, T18I, and N37L showed an increase of 35.1 degrees C in the transition midpoint and of 28.5 kJ mol(-1) (at 70 degrees C) in the Gibbs free energy of stabilization. It was considerably more stable than the best variant from a previous Proside selection, in which positions were randomized that had originally been identified by computational design. Only a single substitution (T18I) was found in both selections. The best variants from the present selection showed a higher cooperativity of thermal unfolding, as indicated by an increase in the enthalpy of unfolding by about 60 kJ mol(-1). This increase is apparently correlated with the presence of Leu residues that were selected at the positions 16 and 37.     

Tissue inhibitor of metalloproteinase-2 (TIMP-2) expression is regulated by multiple neural differentiation signals

Neuronal differentiation requires exquisitely timed cell cycle arrest for progenitors to acquire an appropriate neuronal cell fate and is achieved by communication between soluble signals, such as growth factors and extracellular matrix molecules. Here we report that the expression of TIMP-2, a matrix metalloproteinase inhibitor, is up-regulated by signals that control proliferation (bFGF and EGF) and differentiation (retinoic acid and NGF) in neural progenitor and neuroblastoma cell lines. TIMP-2 expression coincides with the appearance of neurofilament-positive neurons, indicating that TIMP-2 may play a role in neurogenesis. The up-regulation of TIMP-2 expression by proliferate signals suggests a role in the transition from proliferation to neuronal differentiation. Live labeling experiments demonstrate TIMP-2 expression only on alpha(3) integrin-positive cells. Thus, TIMP-2 function may be mediated via interaction with integrin receptor(s). We propose that TIMP-2 represents a component of the neurogenic signaling cascade induced by mitogenic stimuli that may withdraw progenitor cells from the cell cycle permitting their terminal neuronal differentiation.     

Colominic acid inhibits the proliferation of cultured bovine aortic endothelial cells and injures their monolayers: cell density-dependent effects prevented by sulfation

Colominic acid (CA), produced by Escherichia coli K1, is a polymer of sialic acid linked through alpha (2-->8) glycosidic linkages. Although there are several studies on the biological activities of chemically sulfated CA, the activity of CA has been incompletely understood. In the present study, we investigated the effects of CA, prepared as an alpha2,8-linked homopolymer of N-acetylneuraminic acid, on the proliferation and monolayer maintenance of bovine aortic endothelial cells in culture. The results indicate that CA potently inhibits the proliferation of sparse endothelial cells without nonspecific cell damage. The inhibitory effect of CA was markedly stronger than those of sodium spirulan and calcium spirulan, known polysaccharides that inhibit endothelial cell proliferation. On the other hand, in dense endothelial cells, CA induced nonspecific cell damage and markedly injured the monolayer. These results indicate that CA has two distinct effects on vascular endothelial cells: one is the inhibition of proliferation when the cell density is low, and the other is the nonspecific cytotoxicity when the cell density is high. Interestingly, these cell density-dependent effects of CA could be prevented by sulfation of the CA chains. Therefore, it is concluded that CA not only inhibits the proliferation of sparse endothelial cells without nonspecific cell damage but also injures dense cells in a monolayer by nonspecific cytotoxicity, which can be prevented by sulfation of the polysaccharide.     

Surviving the end-Ordovician extinctions: evidence from the earliest Silurian brachiopods of northeastern Jiangxi and western Zhejiang provinces, East China

Earliest Rhuddanian (Silurian) brachiopods are recorded from the basal part of the Lower Llandovery Shiyang and Anji formations in western Zhejiang and northeastern Jiangxi provinces, East China. Associated graptolites including Normalograptus jerini indicate the lowest Rhuddanian Akidograptus ascensus Biozone. The surviving brachiopod fauna includes 19 genera dominated by orthids and strophomenids, whereas pentamerids and atrypids that inhabited mainly warmer water regimes, and were almost absent in the cool/cold Hirnantia Fauna, occur rarely in the studied fauna. Each family is represented by a single genus that seeded their recovery. The predominance of these long-ranging and widely distributed genera is one of major characters of the brachiopod survival in east China. From qualitative and quantitative analysis of faunal composition, diversity and abundance, with evidences from palaeoecology and palaeogeography, the Levenea qianbeiensis Association, Katastrophomena-Leptaena-Levenea Association, and Glyptorthis-Epitomyonia-Levenea Association are recognized and assigned to BA (Benthic Assemblage) 2, BA3, and an ecozone close to the BA3-4 boundary respectively. No Lazarus genera are recorded in this study. Skenidioides and Epitomyonia were chiefly regarded as deeper-water taxa in the Ordovician and Silurian, but are recorded from shallow-water in east China during the early Rhuddanian, indicating an ecologic experiment with these taxa migrating from deep into shallower, better-oxygenated sites at the crisis time and during the subsequent survival interval. This study further demonstrates that the brachiopod faunal turnover after the end-Ordovician extinctions may not have been completed until the late Rhuddanian in South China.     

Knockdown of CD146 reduces the migration and proliferation of human endothelial cells

Our previous study has demonstrated that CD 146 molecule is a biomarker on vascular endothelium,which is involvedin angiogenesis and tumor growth.However the mechanism behind is not clear.Here we have for the first time devel-oped a novel CD146 blockade system using CD146 siRNA to study its function on endothelial cells.Our data showedthat CD146 siRNA specifically blocked the expression of CD146 on both mRNA and protein levels,leading to thesignificant suppression of HUVEC proliferation,adhesion and migration.These results demonstrate that CD146 playsa key role in vascular endothelial cell activity and angiogenesis,and CD146 siRNA can be used as a new inhibitor foranti-angiogenesis therapy.     

NaV1.6a is required for normal activation of motor circuits normally excited by tactile stimulation

A screen for zebrafish motor mutants identified two noncomplementing alleles of a recessive mutation that were named non‐active (nav^mi89 and nav^mi130). nav embryos displayed diminished spontaneous and touch‐evoked escape behaviors during the first 3 days of development. Genetic mapping identified the gene encoding Na_V1.6a (scn8aa) as a potential candidate for nav. Subsequent cloning of scn8aa from the two alleles of nav uncovered two missense mutations in Na_V1.6a that eliminated channel activity when assayed heterologously. Furthermore, the injection of RNA encoding wild‐type scn8aa rescued the nav mutant phenotype indicating that scn8aa was the causative gene of nav. In‐vivo electrophysiological analysis of the touch‐evoked escape circuit indicated that voltage‐dependent inward current was decreased in mechanosensory neurons in mutants, but they were able to fire action potentials. Furthermore, tactile stimulation of mutants activated some neurons downstream of mechanosensory neurons but failed to activate the swim locomotor circuit in accord with the behavioral response of initial escape contractions but no swimming. Thus, mutant mechanosensory neurons appeared to respond to tactile stimulation but failed to initiate swimming. Interestingly fictive swimming could be initiated pharmacologically suggesting that a swim circuit was present in mutants. These results suggested that Na_V1.6a was required for touch‐induced activation of the swim locomotor network. © 2010 Wiley Periodicals, Inc. Develop Neurobiol 70:508–522, 2010     

Genetic reduction of mTOR extends lifespan in a mouse model of Hutchinson‐Gilford Progeria syndrome

Hutchinson‐Gilford progeria syndrome (HGPS) is a rare accelerated aging disorder most notably characterized by cardiovascular disease and premature death from myocardial infarction or stroke. The majority of cases are caused by a de novo single nucleotide mutation in the LMNA gene that activates a cryptic splice donor site, resulting in production of a toxic form of lamin A with a 50 amino acid internal deletion, termed progerin. We previously reported the generation of a transgenic murine model of progeria carrying a human BAC harboring the common mutation, G608G, which in the single‐copy state develops features of HGPS that are limited to the vascular system. Here, we report the phenotype of mice bred to carry two copies of the BAC, which more completely recapitulate the phenotypic features of HGPS in skin, adipose, skeletal, and vascular tissues. We further show that genetic reduction of the mechanistic target of rapamycin (mTOR) significantly extends lifespan in these mice, providing a rationale for pharmacologic inhibition of the mTOR pathway in the treatment of HGPS.