Bioaugmentation of a two-stage thermophilic (68 degrees C/55 degrees C) anaerobic digestion concept for improvement of the methane yield from cattle manure

The possibility of improving a two-stage (68 degrees C/55 degrees C) anaerobic digestion concept for treatment of cattle manure was studied. In batch experiments, a 10-24% increase of the specific methane yield from cattle manure and its fractions was obtained, when the substrates were inoculated with bacteria of the genus Caldicellusiruptor and Dictyoglomus. In a reactor experiment inoculation of a 68 degrees C pretreatment reactor with Caldicellusiruptor resulted in a 93% increase in the methane yield of the pretreatment reactor for a period of 18 days, but gave only a slight increase in the overall methane yield of the two-stage setup.     

Mesocestoides corti (syn. vogae, cestoda): characterization of genes encoding cysteine-rich secreted proteins (CRISP)

With the aim of identifying genes involved in development and parasite adaptation in cestodes, four coding sequences were isolated from the cyclophyllidean Mesocestoides corti larval stage (tetrathyridium). Genes showed significant similarity to the cysteine-rich secreted protein (CRISP) encoding genes, a large family that includes stage and tissue-specific genes from diverse organisms, many associated with crucial biological processes. The full-length McCrisp2 cDNA encodes a predicted protein of 202 residues in length, containing 10 cysteines and a putative signal peptide. The expression level of McCrisp2 was estimated by Real-time PCR, relative to GAPDH, showing an increase of 75% in segmented worms compared to tetrathyridia. By in situ hybridization, McCrisp2 expression was localized mainly at the larvae apical region of tetrathyridia and in the proglottids of segmented worms. Taken together our results suggest a possible role for M. corti CRISP proteins as ES products, potentially involved in differentiation processes as proposed for homologs in other organisms.     

3种荒漠盐生植物根系及根毛形态特征的比较研究

在水培条件下,针对梭梭、囊果碱蓬和钠猪毛菜3种荒漠盐生植物,研究它们苗期在不同盐浓度条件下根系和根毛形态的差异。结果表明：一定浓度的盐分可以促进3种盐生植物生长,但较高浓度的盐抑制其生长,特别是对根系生长的抑制作用更大。在同样盐浓度下,钠猪毛菜的生长最快,生物量也最大。在盐分浓度较低时,3种盐生植物的主根长和总根长都有所增加,与对照相比,囊果碱蓬增加的幅度较大,但高浓度的盐会抑制根系总长度的增加,其中囊果碱蓬较梭梭和钠猪毛菜抑制的程度轻。盐分对3种植物的根系平均直径没有显著的影响,但有减小的趋势。在水培条件下,梭梭和囊果碱蓬的根系上、中、下部分布的较均匀,而钠猪毛菜的根系中部比上部和下部有显著的增加,盐分对每种植物的根系的分布没有显著的影响。3种植物的根毛与根系生长环境中的盐浓度没有明显相关性;3种植物之间,根毛的长度和密度有显著差异。从根系和根毛的形态特征可以推断：囊果碱蓬比梭梭和钠猪毛菜具有较强的抗旱性和耐极薄能力;梭梭的耐盐能力较其它2种植物差,囊果碱蓬的耐盐性最强。     

油葵苗期抗旱相关性状的QTL定位及候选基因筛选

干旱是限制向日葵生长发育的重要因素之一。为探究向日葵苗期抗旱性分子机制,该研究以向日葵K55与K58杂交构建的150个F₇重组自交系群体为材料,对其在正常浇水和干旱胁迫两种水分处理条件下的叶片相对电导率、叶绿素含量、叶面积、叶片相对含水量、根长进行表型测定,利用前期建立的SNP、SSR分子标记遗传连锁图谱,通过复合区间作图法对5个抗旱相关的性状进行QTL定位。结果表明：(1)共定位到向日葵QTL位点11个,其中正常浇水条件下5个,干旱胁迫条件下6个,表型贡献率为0.768%~7.547%,且5号连锁群上定位到的QTL位点最多(3个)。(2)QTL置信区间内共筛选到62个与干旱相关的候选基因,包括位于qLA 8 1上的rna23019、rna23004、rna22661、rna22193、rna23294、rna22783和位于qCC 13 1上的rna40140,这些基因可作为后续基因克隆及功能研究的重点候选基因。该研究结果为向日葵抗旱性研究及其遗传改良奠定了基础。     

不同产地苦楝苗期生长节律研究

苦楝在我国分布广泛,具有丰富的遗传变异性。为进一步做好苦楝种源筛选和良种选育工作,该文对不同产地苦楝实生苗生长性状和各阶段的生长特点进行了比较分析,初步揭示了苦楝苗期生长规律。以15个产地的1年生实生苗为试材,对苗高、地径、复叶生长及生物量积累等生长性状进行了观测分析,并用Logistics方程对生长节律进行了拟合。结果表明:(1)不同产地苦楝苗高、地径生长差异均达显著水平,根生物量、茎生物量及复叶相关性状差异均达极显著性水平;(2)苗高和地径生长均呈现慢-快-慢的S型生长规律,且均存在2次生长高峰,与苗高生长高峰出现时间相比,地径生长高峰出现时间较晚;(3)Logistic拟合方程的R²为0.976～0.994,均达到极显著相关水平,说明可用Logistic方程拟合苦楝的生长节律;(4)总体上地径速生期较苗高速生期长20～30 d,北方产地苗高和地径进入速生期和结束速生期的时间均早于南方产地,速生期苗高和地径累积生长量均超过总生长量的60%;(5)各生长指标均与纬度负相关,苗高、生物量及复叶面积与经度正相关,其他指标与经度负相关。综上结果表明,苦楝为全期生长型树种,各生长性状在产地间达显著差异水平,生长受纬度和经度双重控制,以纬度控制为主。     

Using behavior to determine immature life‐stages in captive western gorillas

Ontogenic development is divided into infant, juvenile, adolescent and adult life‐stages. Although the developmental trajectory of an individual is a flexible entity, which differs within species, environment and sex, life‐stage classifications are generally structured, age‐based systems. This invariably leads to rigidity within a dynamic system and consequently hampers our understanding of primate life history strategies. We propose that life‐stage classifications should be quantitative, flexible entities, which use a reliable measurement of development. Here, we provide a methodological example where placement into a life‐stage is based upon behavioral variance between other similar‐aged individuals. Behavioral data were collected from 12 male (3–11 years old) and 9 female (3–8 years old) captive immature western gorillas (Gorilla gorilla gorilla) housed in five family groups, using continuous focal sampling; 900 hr of data were collected over 131 days. Data were applied to four published life‐stage classifications for mountain gorillas (Gorilla beringei beringei), which showed variable ability to determine life‐stage in western gorillas. A new life‐stage classification (Hutchinson & Fletcher) was proposed specifically for western gorillas, whereby multiple co‐varying behavior provided a robust measure of linear development across immaturity. Each life‐stage was found to be a distinct ontogenic phase and the classification discriminated life‐stage with a high level of accuracy. Using the Hutchinson & Fletcher classification we provide evidence for disparity in developmental trajectories between the sexes from the juvenile period onwards. To expand the understanding of primate life histories, we propose that flexible classifications should be used to enable comparison of allometric life history traits within and between species, from birth onwards. Am. J. Primatol. 72:492–501, 2010. © 2010 Wiley‐Liss, Inc.     

Spatial population genetic structure in Trillium grandiflorum: the roles of dispersal, mating, history, and selection

The roles of the various potential ecological and evolutionary causes of spatial population genetic structure (SPGS) cannot in general be inferred from the extant structure alone. However, a stage-specific analysis can provide clues as to the causes of SPGS. We conducted a stage-specific SPGS analysis of a mapped population of about 2000 Trillium grandiflorum (Liliaceae), a long-lived perennial herb. We compared SPGS for juvenile (J), nonreproductive (NR), and reproductive (R) stages. Fisher's exact test showed that genotypes had Hardy-Weinberg frequencies at all loci and stage classes. Allele frequencies did not differ between stages. Bootstrapped 99% confidence intervals (99%CI) indicate that F-statistic values are indistinguishable from zero, (except for a slightly negative FIT for the R stage). Spatial autocorrelation was used to calculate f the average kinship coefficient between individuals within distance intervals. Null hypothesis 99%CIs for f were constructed by repeatedly randomizing genotypic locations. Significant positive fine-scale genetic structure was detected in the R and NR stages, but not in the J stage. This structure was most pronounced in the R stage, and declined by about half in each remaining stage: near-neighbor f = 0.122, 0.065, 0.027, for R, NR, and J, respectively. For R and NR, the near-neighbor f lies outside the null hypothesis 99%CI, indicating kinship at approximately the level of half-sibs and first cousins, respectively. We also simulated the expected SPGS of juveniles post dispersal, based on measured R-stage SPGS, the mating system, and measured pollen and seed dispersal properties. This provides a null hypothesis expectation (as a 99%CI) for the J-stage correlogram, against which to test the likelihood that post-dispersal events have influenced J-stage SPGS. The actual J correlogram lies within the null hypothesis 99%CI for the shortest distance interval and nearly all other distance intervals indicating that the observed low recruitment, random mating and seed dispersal patterns are sufficient to account for the disappearance of SPSG between the R and the J stages. The observed increase in SPGS between J and R stages has two potential explanations: history and local selection. The observed low total allelic diversity is consistent with a past bottleneck: a possible historical explanation. Only a longitudinal stage-specific study of SPGS structure can distinguish between historical events and local selection as causes of increased structure with increasing life history stage.     

New challenges in the management of the Brazilian Pantanal and catchment area

The Pantanal wetland is a vast seasonally inundated area of extraordinary landscape and biological diversity and complexity. It is located in the upper portion of the Paraguay River basin in central South America. During the rainy season, increased stream discharge from the surrounding basin produces an annual flood pulse through the Pantanal. Increasing human impact, such as dam construction, deforestation, agricultural related activities, and the Hidrovia project in the Parana-Paraguay waterway, threaten the ecological stability of the Pantanal area. As a result, there is an urgent need to introduce new management practices in the Pantanal Basin. In this paper we present a concept for managing the Pantanal catchment based on the integration of ecological knowledge, institutional organization, and involvement of different stakeholders. We propose approaches for an integrated management of the Pantanal and its catchment based on improving data bases and the empowerment of the stakeholder groups. The latter depends on increasing the level of education and access to information, as well as implementing procedures to improve public involvement and enforcement of environmental regulations.This revised version was published online in March 2005 with corrections to the issue cover date.     

Discovery stage pharmacokinetics using dried blood spots

Early in the discovery stage, the measurement of drug candidates in biological fluids as a function time provides important information used in decision making for lead optimization. The detection methodology primarily used is liquid chromatography coupled to triple quadrupole mass spectrometry (LC-MS). Sample preparation is an important aspect of these experiments and robotic-based automation is commonly used. The often overlooked aspect of these experiments is the sample collection itself. Typically, several hundred microliters of whole blood is collected and the plasma fraction separated for each time-point. The plasma is then transferred to an appropriate vessel for subsequent aliquoting and processing. We describe a method for performing discovery stage pharmacokinetic analysis using whole blood dried onto filter paper. The use of dried blood spots is a well established technique for neo-natal screening, and its application to early screening of drug candidates proves to be robust, reliable and reproducible.