Role of two contrasting ecosystem engineers (<Emphasis Type="Italic">Zostera noltii</Emphasis> and <Emphasis Type="Italic">Cymodocea nodosa</Emphasis>) on the food intake rate of <Emphasis Type="Italic">Cerastoderma edule</Emphasis>

Seagrasses are well known ecosystem engineers that can significantly influence local hydrodynamics and the abundance and biodiversity of macrobenthic organisms. This study focuses on the potential role of the seagrass canopy structure in altering the abundance of filter-feeding organisms by modifying the hydrodynamic driven food supply. We quantified the effect of two ecosystem engineers with contrasting canopy properties (i.e. Zostera noltii and Cymodocea nodosa) on the food intake rate of a suspension-feeding bivalve Cerastoderma edule living in these seagrass meadows. Field experiments were carried out in two seagrass beds (Z. noltii and C. nodosa) and bare sediment, located on sandflat characterised by a relatively high hydrodynamic energy from waves and currents. Results demonstrated that the filter-feeding rate was almost twofold increased when C. edule was inhabiting Z. noltii meadows (1.10 ± 0.24 μg Chl g Fresh Weight⁻¹) when compared to cockles living on the bare sediment (0.65 ± 0.14 μg Chl g FW⁻¹). Intermediate values were found within C. nodosa canopy (0.97 ± 0.24 μg Chl g FW⁻¹), but filter feeding rate showed no significant differences with values for Z. noltii meadows. There were no apparent correlations between canopy properties and filter-feeding rates. Our results imply that food refreshment within the seagrass canopies was enough to avoid food depletion. We therefore expect that the ameliorated environmental conditions within vegetated areas (i.e. lower hydrodynamic conditions, higher sediment stability, lower predation pressure…) in combination with sufficient food supply to prevent depletion within both canopies are the main factors underlying our observations.     

The Unscented Kalman Filter estimates the plasma insulin from glucose measurement

Understanding the simultaneous interaction within the glucose and insulin homeostasis in real-time is very important for clinical treatment as well as for research issues. Until now only plasma glucose concentrations can be measured in real-time. To support a secure, effective and rapid treatment e.g. of diabetes a real-time estimation of plasma insulin would be of great value. A novel approach using an Unscented Kalman Filter that provides an estimate of the current plasma insulin concentration is presented, which operates on the measurement of the plasma glucose and Bergman's Minimal Model of the glucose insulin homeostasis. We can prove that process observability is obtained in this case. Hence, a successful estimator design is possible. Since the process is nonlinear we have to consider estimates that are not normally distributed. The symmetric Unscented Kalman Filter (UKF) will perform best compared to other estimator approaches as the Extended Kalman Filter (EKF), the simplex Unscented Kalman Filter (UKF), and the Particle Filter (PF). The symmetric UKF algorithm is applied to the plasma insulin estimation. It shows better results compared to the direct (open loop) estimation that uses a model of the insulin subsystem.     

木质纤维素分解复合菌系WSD-5组成菌株的分离及其产酶特性

复合菌系WSD-5具有高效的分解能力和产酶能力,以探明WSD-5的协同分解机理和优化高效组合为目的,通过纯培养分离手段,获得了11株细菌和3株真菌。16S rDNA比对结果表明,细菌分别为Pseudomonas sp.、Pseudomonas aeruginosa、Achromobacter sp.、Stenotrophomonas sp.、Bacillus fusiformis、Bacillus cereus、Brevundimonas sp.、Ochrobactrum sp.、Cytophaga sp.、Benzo(a)pyrene-degrading bacter、Flavobacterium sp.的近缘种;26S rDNA比对结果表明3株真菌分别为Pseudallescheria boydii、Coprinus cinereus的近缘种。分离菌株中有4株细菌和3株真菌能在CMC平板上产生透明圈,但以糖化力法测定酶活结果只有3株真菌具有产酶能力。3株真菌的酶活动态测定结果,酶活的高峰均出现在7?14 d,并且呈现多峰变化;3株真菌的酶活种类表现为,滤纸酶活性、纤维素内切酶活性和外切酶活性均以菌株F1最高,分别达到了1.05、5.53和0.56 U/mL,β-葡萄糖甘酶活性和木聚糖酶活性以菌株FC最高,分别达到0.44和58.95 U/mL,其木聚糖酶活为F1最高值的6倍。     

Recent advances in polysaccharide bio-based flocculants

Natural polysaccharides, derived from biomass feedstocks, marine resources, and microorganisms, have been attracting considerable attention as benign and environmentally friendly substitutes for synthetic polymeric products. Besides many other applications, these biopolymers are rapidly emerging as viable alternatives to harmful synthetic flocculating agents for the removal of contaminants from water and wastewater. In recent years, a great deal of effort has been devoted to improve the production and performance of polysaccharide bio-based flocculants. In this review, current trends in preparation and chemical modification of polysaccharide bio-based flocculants and their flocculation performance are discussed. Aspects including mechanisms of flocculation, biosynthesis, classification, purification and characterization, chemical modification, the effect of physicochemical factors on flocculating activity, and recent applications of polysaccharide bio-based flocculants are summarized and presented.     

一种保藏小单孢菌的简便方法─滤纸保藏法

用滤纸法保藏７２株小单孢菌在冰箱１０℃无干燥条件下,保藏７年５个月后检查其存活率、抗菌活力,观察其形态特征、培养特征和生化特征。结果表明,所保藏的菌种全部存活,且抗菌活力、生理特征等保持原有菌株的特征水平。我们认为,用滤纸法保藏小单孢菌效果好,方法简便,适用于在临床上、工业生产上和科研中有实用价值的庆大霉素、小诺霉素、西梭霉素、小单孢菌的保藏。     

Leishmania donovani: effect of temperature on RNA metabolism

The present study concerns RNA metabolism of Leishmania donovani and its changes during exposure to higher temperatures. The incorporation of labeled precursors into RNA was found to be greatly decreased during incubation at 37 °C in comparison with that at the optimum temperature of growth (22 °C). The decreased incorporation was shown to be mainly due to augmented template RNA degradation. The RNA-polymerase activity remained unaffected at the elevated temperature, but the uptake of labeled uracil was markedly inhibited.     

Protein identification and quantification from riverbank grape,Vitis riparia: Comparing SDS‐PAGE and FASP‐GPF techniques for shotgun proteomic analysis

Protein sample preparation optimisation is critical for establishing reproducible high throughput proteomic analysis. In this study, two different fractionation sample preparation techniques (in‐gel digestion and in‐solution digestion) for shotgun proteomics were used to quantitatively compare proteins identified in Vitis riparia leaf samples. The total number of proteins and peptides identified were compared between filter aided sample preparation (FASP) coupled with gas phase fractionation (GPF) and SDS‐PAGE methods. There was a 24% increase in the total number of reproducibly identified proteins when FASP‐GPF was used. FASP‐GPF is more reproducible, less expensive and a better method than SDS‐PAGE for shotgun proteomics of grapevine samples as it significantly increases protein identification across biological replicates. Total peptide and protein information from the two fractionation techniques is available in PRIDE with the identifier PXD001399 ( http://proteomecentral.proteomexchange.org/dataset/PXD001399 ).     

Bioconversion of filter mud using vermicomposting employing two exotic and one local earthworm species

Three different earthworm species Eisenia fetida, Eudrilus eugeniae and Perionyx excavatus in individual (Monocultures) and combinations (Polycultures) were utilized to compare the suitability of worm species for vermicomposting of filter mud as well as the quality of the end product. The filter mud blended with saw dust can be directly converted into good quality fertilizer (vermicompost). Eight different reactors including three monocultures and four polycultures of E. fetida, E. eugeniae and P. excavatus and one control were used for the experiment. Vermicomposting resulted in significant reduction in C/N ratio, pH, total organic matter (TOC) but increase in electrical conductivity (EC), total nitrogen (TN), total phosphorus (TP) and macronutrients (K, Ca and Na). Oxygen uptake rate (OUR) dropped up to 1.64–1.95 mg/g (volatile solids) VS/day for monoculture reactors and 1.45–1.78 mg/g VS/day for polycultures reactors, respectively, after 45 days of vermicomposting. Cocoon production and the earthworm biomass increased as vermicomposting progressed. On an overall the mono as well as polyculture reactors produced high quality stable compost free from pathogens and no specific differentiation could be inferred between the reactors.     

Depressing synapse as a detector of frequency change

In this article we discuss the short-term synaptic depression using a mathematical model. We derive the model of synaptic depression caused by the depletion of synaptic vesicles for the case of infinitely short stimulation time and show that the analytical formulas for the postsynaptic potential (PSP) and kinetic functions take simple closed form. A solution in this form allows an analysis of the characteristics of depression as a function of the models parameters and the derivation of analytic formulas for measures of short time synaptic depression commonly used in experimental studies. Those formulas are used to validate the model by fitting it to two types of synapses described in the literature. Given the fitted parameters we discuss the behavior of the synapse in situations involving frequency change. We also indicate a possible role of depressing synapses in information processing as not only a filter of high frequency input but as a detector of the return from high frequency stimulation to the stimulation within frequency band specific for a given synapse.