Use of the additive main effects and multiplicative interaction model in QTL mapping for adaptation in barley

The additive main effects and multiplicative interaction (AMMI) model has emerged as a powerful analytical tool for genotype x environment studies. The objective of the present study was to assess its value in quantitative trait locus (QTL) mapping. This was done through the analysis of a large two-way table of genotype-by-environment data of barley (Hordeum vulgare L.) grain yields, where the genotypes constituted a genetic population suitable for mapping studies. Grain yield data of 150 doubled haploid lines derived from the Steptoe x Morex cross, and the two parental lines, were taken by the North American Barley Genome Mapping Project (NABGMP) at 16 environments throughout the barley production areas of the USA and Canada. Four regions of the genome were responsible for most of the differential genotypic expression across environments. They accounted for approximately 50% of the genotypic main effect and 30% of the genotype x environment interaction (GE) sums of squares. The magnitude and sign of AMMI scores for genotypes and sites facilitate inferences about specific interactions. The parallel use of classification (cluster analysis of environments) and ordination (principal component analysis of GE matrix) techniques allowed most of the variation present in the genotype x environment matrix to be summarized in just a few dimensions, specifically four QTLs showing differential adaptation to four clusters of environments. Thus, AMMI genotypic scores, when the genotypes constituted a population suitable for QTL mapping, could provide an adequate way of resolving the magnitude and nature of QTL x environment interactions.Ignacio Romagosa was on sabbatical leave from the University of Lleida and the Institut de Recerca i Tecnologia Agroalimentàries, Lleida, Spain, when this study was conducted     

Energy metabolism and ATP free-energy change of the intertidal wormSipunculus nudus below a critical temperature

The intertidal wormSipunculus nudus was exposed to various temperatures for an analysis of the integrated changes in energy and acid-base status. Animals were incubated in sea water or maintained for up to 8 days at 4 and 0°C while dwelling in the sediment. Cannulation of the animals prior to experimentation allowed the analysis of blood gas parameters ( , and pH). fell to 0 torr within 8 days at 0°C. A simultaneous reduction of ventilatory activity was derived from measurements of the pattern of coelomic fluid pressure changes associated with ventilatory movements. The increase in and an onset of anaerobic metabolism, indicated by the accumulation of end products like acetate and propionate both in the coelomic fluid and the body wall musculature, led to the development of a progressive acidosis and a deviation from the alphastat regulation of intracellular pH seen in unburied animals. The drop in intracellular pH together with the depletion of the adenylates and the phosphagen, phospho-l-arginine, reflect a significant decrease in the Gibb's free-energy change of ATP hydrolysis. These changes are interpreted to indicate lethal cold injuries, because recovery was not possible when the animals were returned to 12°C after more than 2 days of exposure to 0°C. A low critical temperature indicating the onset of cold-induced anaerobiosis is concluded to exist below 4°C owing to the insufficient response of the ventilatory system to the developing hypoxia.     

太湖16000年来沉积环境的演变

通过对太湖钻孔岩芯岩性,结构,构造的剖析及粒度,磁化率的测试,发现冰后期东太湖形成于跑今６５００年前,在距今６５００－５８００年,为一水深约２－３ｍ的,经常受到流水作用影响的浅水湖泊,距今约５８００－５７００年,东太湖曾一度干枯或接近于干枯,距今５７００年以来湖泊变浅,平均水深只有１ｍ左右,由于湖泊变浅,湖底经常遭受波浪的扰动,形成波状层理或透镜状层理。西太湖局部洼地集水成湖的时间比东太湖早,并且     

The influence of substratum age on patterns of protozoan assemblages in freshwater Aufwuchs — a case study

The sulfate reduction rate was measured for almost four years in the profundal sediments of Lake Kizaki, a mesotrophic lake in central Japan. The rate was generally highest in the surface layer and decreased with depth. Seasonally, sulfate reduction tended to be high in spring and summer, and then to decrease until the end of stratification (December) in spite of a constant in situ temperature of around 6 °C, although fluctuations were found in every year. The rate also fluctuated greatly according to year. The maximum rate of sulfate reduction was 0.33 mmol m⁻² d⁻¹ in May, 1990, and the minimum was 0.004 mmol m⁻² d⁻¹ in March, 1993. These relatively low rates, compared with those reported for freshwater sediments, seem to be due to low concentrations of sulfate in the sediments (5–23 μmol l⁻¹ in the surface layer). The rate was highly correlated with the concentration of sulfate in the sediments. The addition of sulfate stimulated sulfate reduction in all sediment samples tested, but adding lactate did not. Therefore, sulfate reduction should be limited mainly by the supply of sulfate. Measurements of sulfate reduction rates at different concentrations of added sulfate revealed a low concentration of half-saturation constant as low as 12 μmol l⁻¹.     

Past vegetation changes in the Brazilian Pantanal arboreal–grassy savanna ecotone by using carbon isotopes in the soil organic matter

Measurements of the organic carbon inventory, its stable isotopic composition and radiocarbon content were used to deduce vegetation history from two soil profiles in arboreal and grassy savanna ecotones in the Brazilian Pantanal. The Pantanal is a large floodplain area with grass-dominated lowlands subject to seasonal flooding, and arboreal savanna uplands which are only rarely flooded. Organic carbon inventories were lower in the grassy savanna site than in the upland arboreal savanna site, with carbon decreasing exponentially with depth from the surface in both profiles. Changes in ¹³C of soil organic matter (SOM) with depth differed markedly between the two sites. Differences in surface SOM ¹³C values reflect the change from C₃ to C₄ plants between the sites, as confirmed by measurements of ¹³C of vegetation and the soil surface along a transect between the upland closed-canopy forest and lowland grassy savanna. Changes of ¹³C in SOM with depth at both sites are larger than the 3–4 per mil increases expected from fractionation associated with organic matter decomposition. We interpret these as recording past changes in the relative abundance of C₃ and C₄ plants at these sites. Mass balances with ¹⁴C and ¹³C suggest that past vegetational changes from C₃ to C₄ plants in the grassy savanna, and in the deeper part of the arboreal savanna, occurred between 4600 and 11 400 BP, when major climatic changes were also observed in several places of the South American Continent. The change from C₄ to C₃, observed only in the upper part of the arboreal savanna, was much more recent (1400 BP), and was probably caused by a local change in the flooding regime.     

Ecological optima and tolerances of Thelypteris limbosperma,Athyrium distentifolium,and Matteuccia struthiopteris along environmental gradients in Western Norway

The distribution and abundance of Thelypteris limbosperma, Athyrium distentifolium, and Matteuccia struthiopteris are modelled statistically in relation to 14 environmental variables along the major climatic, topographic, and edaphic gradients in western Norway. The data are from 624 stands from which measurements or estimates of mean January and mean July temperatures, humidity, altitude, aspect, and slope are available. From 182 of these stands eight soil variables have also been measured. The species responses are quantified by two numerical methods: Gaussian logit regression and weighted averaging (WA) regression. The estimated WA optima suggest that A. distentifolium has an ecological preference for low July and January temperatures, high altitudes, and soils of low-medium pH and base content. The species shows statistically significant Gaussian responses with summer temperature, humidity (= Martonnes humidity index), altitude, slope, aspect, pH, cation exchange capacity, and base saturation with optima of 8.7 °C, 188.9, 1220 m, 28°, 29°, 4.8, 13.77 mEq 100 g dry soil^-1, and 13.4%, respectively. These suggest that the occurrence and relative abundance of A. distentifolium are well predicted by summer temperature, topography, and soil pH and base status. T. limbosperma has WA optima that suggest that it favours moderately high winter and summer temperatures, high humidity, medium altitude, and soils of low pH and base content. It has significant Gaussian responses to summer temperature (optimum =12.6 °C), winter temperature (-1.8 °C), humidity (179.2), altitude (459.5 m), slope (22.5°), and Na (0.7 mg 100 g dry soil^-1). These suggest that climatic factors, altitude, and slope are significant predictors for its occurrence and abundance. M. struthiopteris has high WA optima for summer temperature, pH, Ca, Mg, K, Na, cation exchange capacity (CEC), and base saturation, and a low optima for humidity and winter temperature. Of these, summer temperature (16.0 °C), Ca (63.1 mg 100 g dry soil^-1), Mg (41.0 mg 100 g dry soil^-1), K (23.6 mg 100 g dry soil^-1), Na (5.0 mg 100 g dry soil^-1), CEC (60.7 mEq 100 g dry soil^-1), and base saturation (56.3%) have significant Gaussian logit responses, as do aspect (150.2°) and loss-on-ignition (9.4%). These results suggest that the occurrence and relative abundance of M. struthiopteris are well predicted by high soil base cations, a generally southern aspect, low organic content in the soil, and high July temperatures.     

Contribution of Monsoon Asia to the carbon budget of the biosphere,past and future

The High Resolution Biosphere Model (HRBM), which has been developed by the group of the author, was used to investigate the carbon balance of the vegetation and the soil in the ecosystems of Monsoon Asia in comparison to the rest of the world. The HRBM is a global grid-based (0.5 degree resolution) model with a monthly time step. It includes modules for natural vegetation, land use, vegetation fires, vegetation composition. A historical carbon budget was calculated for the period 1860–1978 and, on a global scale, validated using atmospheric CO₂ data. Based on the per-country development of the population and their requirements, different reasonable scenarios were used to investigate the potential impacts of land use and deforestation in the period 1990–2050. The HRBM calculates considerable contributions of Monsoon Asia to the global CO₂ emissions due to land use changes in the past. Between 1860 and 1978, about 1/4 of the global releases from land use changes came from South Asian and Southeast Asian biota. The future contributions in the period 1990–2050 depend on the assumed development of the agricultural methods. If the intensity of agriculture and the agricultural productivity will stay the same as in the 1980s, there will be a strong need to increase agricultural areas, and thus deforestation will dominate. If there will be a change over to intensive methods of agricultural production, the presently used areas might be sufficient to provide resources to the growing population.     

Collembolan water relations and environmental change in the maritime Antarctic

The water status of the collembolan Cryptopygtus antarcticus (Willem) was investigated from April 1984 to December 1987 at Signy Island, maritime Antarctic, by monthly field sampling to determine body water content. Water content, expressed either as the weight of water per unit dry weight or as a proportion of fresh weight, exhibited both a seasonal cycle and an upward trend over the 44-month study, both of which were highly significant. On an annual basis, body water content was at a minimum (1.21 g g^?1) in July and maximal (1.98 g g^?1) in September, whilst over the entire study water contents increased from 1.3 to 2.0 g g^?1 (or 57-66% of fresh weight) calculated from the fitted linear regression line. Field water contents were below those found for this species in culture (2.9-5.9 g g^?1). Individual C. antarcticus survived experimental loss of 20% of their body water with a resultant significant rise in haemolymph osmolarity from 285 to 397 mOsm L^?1 and there was no evidence of osmoregulation under the experimental conditions of 20 °C and 35% relative humidity. The cuticular permeability (mean conductance) of individual Collembola in dry air increased exponentially with temperature over the range D-45 °C (Q₁₀= 2.0) showing no control of water loss. The physiological response of C. antarcticus suggests that it experiences water stress in its maritime Antarctic habitats with significant seasonal variations of body water content, which correlate with annual cycles of water availability. It is concluded that the significant rise in its mean body water content over the 44-month field study was associated with increased glacial ablation due to higher levels of irradiation and windspeed making available more liquid water. Analyses of climate records for Signy Island from 1947 to 1990 showed that mean monthly air temperature rose by 0.93 °C over this period and by 2.29 °C during the 1980s, both statistically significant increases. Mean monthly windspeeds also increased significantly during 1970–90, and it is suggested that this parameter is the primary climatic driving force behind the increase in glacial ablation during the last two decades. The field water status of species such as C. antarcticus may reflect changes in the patterns of atmospheric circulation, associated with the circumpolar vortex, through increased ozone depletion due to increased tropospheric concentrations of halocarbons.     

东北地区生态环境中的Se及其生态效应

对东北地区不同环境要素Ｓｅ的分布与转化规律的研究表明,基岩、土壤、粮食和动物毛Ｓｅ含量分别为０．１２、０．１５０－０．５４０、０．００９６－０．０７６５和０．０４０５－０．１４１４μｇ．ｇ＾－１;城市和农村儿童发Ｓｅ含量为０．４６０和０．１８２μｇ．ｇ＾－１。根据不同要素Ｓｅ含量和生态效应,可将该区分为Ｓｅ适宜区、缺乏区和过渡区３个１级区,每个１级区又分为高Ｓｅ源区的低Ｓｅ源区。     

地膜条件下土壤生态因子与玉米产量的关系

研究干旱地区地膜条件下,土壤生态因子对玉米产量的影响．结果表明,最佳种植模式为作物距地膜中心线２１．３—３３．２Ｃｍ,施纯Ｎ＋Ｐ为５９８—７４３ｋｇ·ｈａ－１,玉米产量为１４４９２≤Ｙ佳≤１６５９ｋｇ·ｈ－１．该种植模式有利于提高作物产量及残膜回收．