Nucleotide sequences of the 5.8S rRNA gene and internal transcribed spacer regions in carrot and broad bean ribosomal DNA

Summary Nucleotide sequences of the first and second internal transcribed spacers (ITS1 and ITS2, respectively) of ribosomal DNA (rDNA) from two dicot plants, carrot and broad bean, were determined. These sequences were compared with those of rice, a monocot plant, and other eukaryotic organisms. Both types of ITS region in some species of Angiospermae were the shortest among all eukaryotes so far examined and showed a wide range of variation in their G+C content, in contrast to a general trend toward very high G+C content in animals. Phylogenetic relationships of plants with animals and lower eukaryotes were considered using the nucleotide sequences of carrot and broad bean 5.8S rDNA that were determined in the present study, together with that of wheat 5.8S rRNA, which has been reported previously.     

Determination of monoamines in rat brain regions after chronic administration of lithium

The effect of chronic administration of lithium on the concentration of biogenic amines and some of their metabolites in striatum, hippocampus, hypothalamus, pons-medulla and parietal cortex of rat were studied. Longterm lithium treatment modifies significantly the content of indoleamines in striatum and hypothalamus with minor changes in other structures. Catecholamine levels change after the treatment in striatum, hypothalamus, pons-medulla and parietal cortex. These results indicate that lithium treatment at therapeutic doses selectively modifies the catecholamine and indoleamine contents in discrete areas of the brain.     

A model for the estimation of convective exchange in the littoral region of a shallow lake during cooling

Cooling of lakes through the water surface produces horizontal convective exchange flow between the littoral and the open waters. A mixed-cells-in-series model is developed which, using as input the evolution in time of vertical temperature profiles measured along the littoral slope, provides an estimate of the horizontal exchange flow rates. Application of the model to field data shows that the exchange flow can cause rapid renewal of the littoral waters. Thermally induced water exchange between littoral and pelagic regions transports dissolved constituents, e.g. nutrients, thereby affecting water quality in lacustrine systems.     

利用染色体区段混合BAC探针鉴定食管癌细胞中的染色体畸变

染色体畸变是恶性肿瘤细胞的重要遗传学特征, 文章旨在应用BAC DNA克隆鉴定食管癌细胞中的染色体臂和染色体区段的畸变。针对染色体各区段选取5~10个1 Mb BAC DNA, 分别混合制备成特定染色体区段的BAC DNA混合克隆, 然后将染色体臂上覆盖所有区段的上述混合克隆进一步混合制备成特定染色体臂BAC DNA混合克隆。利用简并寡核苷酸引物聚合酶链反应(Degenerate oligonucleotide primed PCR, DOP-PCR)标记染色体臂探针, 利用切口平移法(Nick translation)标记染色体区段探针, 并对食管癌细胞中期染色体进行荧光原位杂交(Fluorescence in situ hybridization, FISH)分析。正常人外周血淋巴细胞中期染色体FISH结果显示, 上述方法标记的探针具有较高的特异性。进一步利用染色体臂混合探针, 确定了多个食管癌细胞中的染色体重排所涉及的特定染色体臂; 利用染色体区段混合探针, 鉴定出KYSE140的t(1q;7q)衍生染色体中1q上的断点范围位于1q32-q41。文章成功建立了1 Mb BAC DNA混合克隆探针标记技术, 并鉴定出多个食管癌细胞中的染色体臂和染色体区段畸变, 不仅为利用M-FISH技术鉴定肿瘤细胞中的染色体畸变提供了更为准确的方法, 而且还可能进一步将该法推广应用于恶性血液病的核型分析以及产前诊断。     

Impact of past and present land‐management on the C‐balance of a grassland in the Swiss Alps

Grasslands cover about 40% of the ice‐free global terrestrial surface, but their quantitative importance in global carbon exchange with the atmosphere is still highly uncertain, and thus their potential for carbon sequestration remains speculative. Here, we report on CO₂ exchange of an extensively used mountain hay meadow and pasture in the Swiss pre‐Alps on high‐organic soils (7–45% C by mass) over a 3‐year period (18 May 2002–20 September 2005), including the European summer 2003 heat‐wave period. During all 3 years, the ecosystem was a net source of CO₂ (116–256 g C m^?2 yr^?1). Harvests and grazing cows (mostly via C export in milk) further increased these C losses, which were estimated at 355 g C m^?2 yr^?1 during 2003 (95% confidence interval 257–454 g C m^?2 yr^?1). Although annual carbon losses varied considerably among years, the CO₂ budget during summer 2003 was not very different from the other two summers. However, and much more importantly, the winter that followed the warm summer of 2003 observed a significantly higher carbon loss when there was snow (133±6 g C m^?2) than under comparable conditions during the other two winters (73±5 and 70±4 g C m^?2, respectively). The continued annual C losses can most likely be attributed to the long‐term effects of drainage and peat exploitation that began 119 years ago, with the last significant drainage activities during the Second World War around 1940. The most realistic estimate based on depth profiles of ash content after combustion suggests that there is an 500–910 g C m^?2 yr^?1 loss associated with the decomposition of organic matter. Our results clearly suggest that putting efforts into preserving still existing carbon stocks may be more successful than attempts to increase sequestration rates in such high‐organic mountain grassland soils.     

Iberian–Balearic fern regions and their explanatory variables

This article delineates the compositional regions present in the Iberian–Balearic fern flora and compares these regions to previously proposed biogeographic units. It also assesses the extent to which environmental variables could explain the regions and the fern species richness gradients found within them. A combination of 40 previously published and new maps were used to compile the distribution of 123 pteridophytes on a 50 × 50 km UTM grid. Cluster analysis of the resulting 257 squares was used to classify 10 regions based on fern species assemblages. Discriminant function analysis identified the environmental variables that best explained these fern composition regions. Using generalized linear models; the number of species in each square was regressed against topography, climate, geology, environmental diversity, land use and spatial variables within each region. Two main latitudinal pteridophyte zones can be recognized in the Iberian Peninsula. These two zones are longitudinally subdivided into two sub zones. The 10 regions established significantly differ both in species richness and influential environmental variables. Climatic variables discriminate the most among regions, followed by topography, heterogeneity and geology. Pteridophyte richness varies, with richer areas being located along the coast and the main mountain ranges and the poorest areas being in the central plateaus and some north eastern and south western river basins. Species richness variation in Iberia is positively correlated with altitude range, precipitation, maximum altitude and area with siliceous soils. It is negatively correlated with the total annual days of sun, however. The fact that species richness is explained by different variables within each of the 10 regions indicates that the specific factors determining the spatial distribution of species richness vary from region to region. Some coastal regions are poorly explained by the model, and display a negative correlation with the selected causal factors. This finding suggests that persistent historic effects might play a local role in determining species assemblages in these regions. An erratum to this article can be found at     

核基质结合区对转爬山虎芪合酶基因烟草中产生白藜芦醇的作用

采用核基质结合区(MARs)来提高转芪合酶基因(STS)烟草(Nicotiana tabacum L.)中白藜芦醇产物的含量。MARs是细胞中能与核基质特异紧密结合的DNA片段,体外结合实验表明克隆自酵母的MARs序列能特异地与烟草核基质结合。芪合酶是白藜芦醇生物合成中的关键酶,用RT-PCR方法从川鄂爬山虎(Parthenocissus henryana(Hemsl.) Diels et Gilg)中克隆了与葡萄芪合酶基因有较高同源性的芪合酶编码区,将其置于CaMV35SW强启动子下,分别构建两侧带有MARs及不含MARs序列的表达载体,通过农杆菌介导转化烟草。Northern blot及HPLC等分析表明STS基因已整合至烟草染色体中并正常转录,且表达的外源芪合酶在烟草中可催化其底物合成白藜芦醇产物。与对照相比,MARs的存在使转芪合酶基因烟草中白藜芦醇的含量平均提高了约一倍。MARs在转芪合酶基因植物中的应用也为获得抗病性更强、白藜芦醇含量更高、更保健的转基因果蔬的研究奠定了基础。     

核基质结合序列（MAR）与基因表达调控

核基质结合序列（MAR）是能在体外与核基质特异结合的DNA序列,广泛存在于染色质Loop结构的边界序列中。随着研究的深入,发现MAR序列不仅在染色质折叠中起到重要作用,影响邻近内源基因表达,而且将MAR序列构建到外源基因表达盒两侧转化动植物时,也影响外源基因的表达。因此,MAR序列是基因组中一种重要的基因间边界序列,为阐明非编码序列在基因表达中的作用和构建真核生物高效表达载体提供了新途径。