Genetic and phenotypic characterization of Xanthomonas axonopodis pv. maculifoliigardeniae causing bacterial leaf spot of Ixora in Taiwan

Ixora spp. are Rubiaceae plants commonly planted as hedges or potted flower. Recently, incidents of bacterial leaf spot of Ixora were observed in central parts of Taiwan. Previous research on the disease has been scarce and focused mainly on its diagnosis. Therefore, many characteristics of the causal agent remain unclear. The present study aims to improve our understanding of this lesser-characterized pathogen and provide information useful for its identification and management. Bacterial strains Ixo1, Ixo2 and Ixo3 were isolated from infected Ixora x westii. All three isolates were able to grow and induce leaf spot symptoms on Ixora. They also exhibited morphological and physiological characteristics typical of Xanthomonads. Biolog analysis indicated that Ixo1 to Ixo3 have metabolic fingerprints similar to X. axonopodis pv. poinsettiicola. Multilocus sequence analysis and inoculation assays identified Ixo1 to Ixo3 as X. axonopodis pv. maculifoliigardeniae, albeit their gene sequences were very similar to other species/pathovars belonging to the X. euvesicatoria species complex; members of this species complex have different plant hosts, yet share similar housekeeping gene sequences. A semi-specific PCR assay evaluated in this work was able to differentiate Ixo1 to Ixo3 from bacteria not belonging to the X. euvesicatoria species complex, suggesting that the assay may be used in diagnosing bacterial leaf spot of ixoras. Finally, the sensitivity of the isolated pathogen to multiple commercial pesticides was tested, and the results showed that the bacterium is sensitive to streptomycin + tetracycline (10％ SP), thiophanate methyl + streptomycin (68.8％ WP) and oxolinic acid (20% WP), but more tolerant against copper-based chemicals. Overall, the findings from this work may facilitate the identification and management of X. axonopodis pv. maculifoliigardeniae.     

The functional role of microRNAs in alcoholic liver injury

The function of microRNAs (miRNAs) during alcoholic liver disease (ALD) has recently become of great interest in biological research. Studies have shown that ALD associated miRNAs play a crucial role in the regulation of liver‐inflammatory agents such as tumour necrosis factor‐alpha (TNF‐α), one of the key inflammatory agents responsible for liver fibrosis (liver scarring) and the critical contributor of alcoholic liver disease. Lipopolysaccharide (LPS), a component of the cell wall of gram‐negative bacteria, is responsible for TNF‐α release by Kupffer cells. miRNAs are the critical mediators of LPS signalling in Kupffer cells, hepatocytes and hepatic stellate cells. Certain miRNAs, in particular miR‐155 and miR‐21, show a positive correlation in up‐regulation of LPS signalling when they are exposed to ethanol. ALD is related to enhanced gut permeability that allows the levels of LPS to increase, leads to increased secretion of TNF‐α by the Kupffer cells and subsequently promotes alcoholic liver injury through specific miRNAs. Meanwhile, two of the most frequently dysregulated miRNAs in steatohepatitis, miR‐122 and miR‐34a are the critical mediators in ethanol/LPS activated survival signalling during ALD. In this review, we summarize recent findings regarding the experimental and clinical aspects of functions of specific microRNAs, focusing mainly on inflammation and cell survival after ethanol/LPS treatment, and advances on the role of circulating miRNAs in human alcoholic disorders.     

Equine disease association studies: a clinician''s perspective

Diagnostic criteria should be carefully defined and described in disease association studies to allow (1) comparison among studies from different laboratories evaluating the same disease, (2) critical evaluation of selection procedures of patients, and (3) to strengthen genuine associations with any genetic marker system. Factors to consider include age at onset of disease, specialized diagnostic methods necessary to diagnose or eliminate patients with a selected disease, ranges of affectedness and differences in sex expression.     

Studies on precipitating and hemagglutinating antibodies in systemic lupus erythematosus

We studied the precipitating and hemagglutinating autoantibodies in the sera of patients with various connective tissue diseases in general and lupus in particular. Saline soluble extract of goat thymus had adequate antigenic materials as compared to other organs. Twenty per cent of patients with systemic lupus erythematosus were positive for precipitating autoantibodies by immunodiffusion and 44% by counterimmunoelectrophoresis. Normal human subjects, nonrheumatic disease patients and patients with rheumatoid arthritis and progressive systemic sclerosis were all negative. Forty seven per cent of positive systemic lupus erythematosus sera showed two precipitin systems. Enzyme sensitivities were used as the basis of identification of most of the antigenic specificities. Passive hemagglutination was carried out to identify antibodies to non-histone nuclear protein and nuclear ribonucleo-protein antigens. Thirty eight % of systemic lupus erythematosus patients were positive by this technique. Passive hemagglutination although a highly sensitive technique could not detect antibodies against antigenic systems other than non-histone nuclear protein and nuclear ribonucleoprotein.     

Mitochondrial biogenesis: An update

In response to the energy demand triggered by developmental signals and environmental stressors, the cells launch the mitochondrial biogenesis process. This is a self‐renewal route, by which new mitochondria are generated from the ones already existing. Recently, considerable progress has been made in deciphering mitochondrial biogenesis‐related proteins and genes that function in health and in pathology‐related circumstances. However, an outlook on the intracellular mechanisms shared by the main players that drive mitochondrial biogenesis machinery is still missing. Here, we provide such a view by focusing on the following issues: (a) the role of mitochondrial biogenesis in homeostasis of the mitochondrial mass and function, (b) the signalling pathways beyond the induction/promotion, stimulation and inhibition of mitochondrial biogenesis and (c) the therapeutic applications aiming the repair and regeneration of defective mitochondrial biogenesis (in ageing, metabolic diseases, neurodegeneration and cancer). The review is concluded by the perspectives of mitochondrial medicine and research.     

The influence of sexually active non-reproductive groups on persistent sexually transmitted diseases

We describe several population models exposed to a mild life-long sexually transmitted disease, i.e. without significant increased mortality among infected individuals and providing no immunity/recovery. We then modify these models to include non-reproductive groups consisting of those isolated from sexual contact and those who are sexually active but infertile due to choice, medical or other reasons. We analyse the potential effect on the dynamics of the population. We are interested in how the isolated class may curb the growth of the infected group while keeping the healthy population at acceptable levels. We also analyse the difference between being sexually active and abstained within the non-reproductive class and its impact on the epidemic reproductive number and the nature of the bifurcation around the disease-free equilibrium. We provide a comparison with our models introduced in a previous article, which include only the isolated from sexual contact class.     

A genome‐wide association study for the incidence of persistent bovine viral diarrhea virus infection in cattle

Bovine viral diarrhea viruses (BVDV) comprise a diverse group of viruses that cause disease in cattle. BVDV may establish both transient and persistent infections depending on the developmental stage of the animal at exposure. The objective was to determine whether genomic regions harboring single nucleotide polymorphisms (SNPs) could be associated with the presence or absence of persistent BVDV infection. A genome‐wide association approach based on 777 000 SNP markers was used. Samples of animals identified as positive (n = 1200) or negative (n = 1200) for the presence of BVDV in skin samples (n = 1200) were used. DNA samples were combined in 24 pools (100 animals per pool). One SNP, significant at the 5 percent genome‐wide level (P = 9.41 × 10^?8), was detected on chromosome 14, located at position 80 675 176 bp. Fifteen SNPs, residing on chromosomes 1, 2, 6, 8, 10, 15 and 18, were moderately associated (P < 1 × 10^?5) with persistent BVDV infection. Results show that genes harboring or neighboring significant SNPs are involved in leucopenia, signal transduction, RNA splicing and DNA methylation processes.