A model for cell type localization in the migrating slug of <Emphasis Type="Italic">Dictyostelium discoideum</Emphasis> based on differential chemotactic sensitivity to cAMP and differential sensitivity to suppression of chemotaxis by ammonia

The three basic cell types in the migrating slug of Dictyostelium discoideum show differential chemotactic response to cyclic AMP (cAMP) and differential sensitivity to suppression of the chemotaxis by ammonia. The values of these parameters indicate a progressive maturation of chemotactic properties during the transdifferentiation of slug cell types. We present a model that explains the localization of the three cell types within the slug based on these chemotactic differences and on the maturation of their chemotactic properties.     

Role of nitrite reductase in the ammonia-oxidizing pathway of <Emphasis Type="Italic">Nitrosomonas europaea</Emphasis>

Metabolism of ammonia (NH₃) and hydroxylamine (NH₂OH) by wild-type and a nitrite reductase (nirK) deficient mutant of Nitrosomonas europaea was investigated to clarify the role of NirK in the NH₃ oxidation pathway. NirK-deficient N. europaea grew more slowly, consumed less NH₃, had a lower rate of nitrite (NO₂ ⁻) production, and a significantly higher rate of nitrous oxide (N₂O) production than the wild-type when incubated with NH₃ under high O₂ tension. In incubations with NH₃ under low O₂ tension, NirK-deficient N. europaea grew more slowly, but had only modest differences in NH₃ oxidation and product formation rates relative to the wild-type. In contrast, the nirK mutant oxidized NH₂OH to NO₂ ⁻ at consistently slower rates than the wild-type, especially under low O₂ tension, and lost a significant pool of NH₂OH–N to products other than NO₂ ⁻ and N₂O. The rate of N₂O production by the nirK mutant was ca. three times higher than the wild-type during hydrazine-dependent NO₂ ⁻ reduction under both high and low O₂ tension. Together, the results indicate that NirK activity supports growth of N. europaea by supporting the oxidation of NH₃ to NO₂ ⁻ via NH₂OH, and stimulation of hydrazine-dependent NO₂ ⁻ reduction by NirK-deficient N. europaea indicated the presence of an alternative, enzymatic pathway for N₂O production.     

Ammonia removal from livestock wastewater by ammonia-assimilating microorganisms immobilized in polyvinyl alcohol

We isolated ammonia-assimilating microorganisms from the livestock manure treatment systems and evaluated their ammonia-assimilating ability. Many isolates utilized ammonia at high rates when they were purely cultivated in a nitrogen-limited medium to which sterilized lagoon extract had been added. Some isolates that were immobilized in polyvinyl alcohol (PVA) utilized ammonia present in the media containing viable lagoon microorganisms. Staining with 4′,6′-diamidino-2-phenylindole (DAPI) indicated that the immobilized high ammonia-assimilating isolates grew dominantly within the PVA beads. High ammonia-assimilating isolates in the mixed culture containing viable lagoon microorganisms were identified as Pseudomonas spp. and member of Rhizobiaceae species by partial sequencing of the 16S ribosomal DNA.     

Macroecological patterns of archaeal ammonia oxidizers in the Atlantic Ocean

Macroecological patterns are found in animals and plants, but also in micro‐organisms. Macroecological and biogeographic distribution patterns in marine Archaea, however, have not been studied yet. Ammonia‐oxidizing Archaea (AOA) show a bipolar distribution (i.e. similar communities in the northernmost and the southernmost locations, separated by distinct communities in the tropical and gyral regions) throughout the Atlantic, detectable from epipelagic to upper bathypelagic layers (<2000 m depth). This tentatively suggests an influence of the epipelagic conditions of organic matter production on bathypelagic AOA communities. The AOA communities below 2000 m depth showed a less pronounced biogeographic distribution pattern than the upper 2000 m water column. Overall, AOA in the surface and deep Atlantic waters exhibit distance–decay relationships and follow the Rapoport rule in a similar way as bacterial communities and macroorganisms. This indicates a major role of environmental conditions in shaping the community composition and assembly (species sorting) and no, or only weak limits for dispersal in the oceanic thaumarchaeal communities. However, there is indication of a different strength of these relationships between AOA and Bacteria, linked to the intrinsic differences between these two domains.     

Hydrogen production by Rhodopseudomonas palustris WP 3-5 in a serial photobioreactor fed with hydrogen fermentation effluent

In this study, a lab-scale serial photobioreactor composed of three column reactors was constructed and continuously operated to investigate several parameters influencing photohydrogen production when using the synthetic wastewater and the anaerobic hydrogen fermentation effluents as the influents. The results indicated that better hydrogen production rate was obtained when the serial photobioreactor was operated under cellular recycling at a short HRT of 8 h. The serial photobioreactor maintained high hydrogen content ca. 80% in the produced gas and 0.4× dilution ratio was the suitable ratio for hydrogen production. When the photobioreactor fed with the real wastewater (Effluent 1) containing 100 mg/L NH₄Cl, Column 1 reactor successfully reduced ammonia concentration to about 60 mg/L for cell synthesis, resulting in a steady hydrogen production in the following two column reactors. The average hydrogen production rate was 205 mL-H₂/L/d.     

Ammonia removal from a waste air stream using a biotrickling filter packed with polyurethane foam through the SND process

This paper presents the results of a bench-scale biotrickling filter (BTF) on the removal of ammonia gas from a waste stream using a simultaneous nitrification/denitrification (SND) process. It was found that the developed BTF could completely remove 100 ppm ammonia from a waste stream, with an empty bed retention time of 60 s and 98.4% nitrogen removal through the SND process under the tested conditions. It was elucidated that both autotrophic and heterotrophic bacteria were involved in the nitrogen removal trough the SND process in the BTF. Additionally, the elimination capacity of total nitrogen by the BTF increased from 3.5 to 18.4 g N/m³ h with an inlet load of 20.6 g N/m³ h (73.6%). The findings of this study suggest that the BTF can be operated to attain complete ammonia removal through the SND process, thereby making the treatment of ammonia-laden gas streams both short and cost-effective.     

土壤盐渍化对尿素与磷酸脲氨挥发的影响

氨挥发是肥料氮素损失的重要途径之一,肥料类型、土壤类型、肥料用量以及土壤全盐量均影响氨挥发损失率及挥发特征。本文采用通气法测定了磷酸脲和尿素两种肥料六个施肥量处理分别施入六个不同盐渍化程度（1.7、9.9、16.4、23.2、29.1、37.9 g/kg）的土壤后氨挥发累积状况和动力学特性,以及土壤氨挥发累积量与土壤电导值之间的相关性。结果表明：（1）在土壤总盐介于1.66 -37.9 g/kg的范围内,随着土壤含盐量增加,尿素与磷酸脲处理的氨挥发累积量显著增加;土壤含盐量对氨挥发速率有显著的促进作用。（2）各处理二次线性函数拟合的二项式系数a均为负值,表明：在不同盐渍化条件下肥料的挥发速率是随着时间增长而降低的;一次线性函数和Elovich 方程的斜率a随土壤含盐量增加而增大,表明：土壤盐渍化将加剧土壤的氨挥发速率。（3）土壤氨挥发累积量与电导值拟合结果符合logistic方程（︱R︱分别为0.9732,0.9815,0.965,0.9182,0.9817,0.9971︱R︱>r0.01=0.9172, n=6）,氨挥发累积量随土壤电导值呈“S”型增长。     

地衣芽孢杆菌对养殖水体氨氮、残饵降解特性研究

试验对从健康养殖大黄鱼肠道中分离筛选到的一株益生地衣芽孢杆菌X3914的氨氮、残饵降解特性进行了研究。结果表明,X3914菌株降解氨氮的最适温度、盐度和pH分别为30℃、2.0%和7.0,在氨氮初始浓度为100 mg/L时,24h内的氨氮降解率达到36.2%。通过向添加1%饲料的大黄鱼养殖用水中接种1%和5%(体积比)的菌量(菌浓度约为9.0×108 cfu/L)来研究地衣芽孢杆菌浓度对降解饲料中蛋白质、淀粉的影响。结果表明,接种5%菌量的降解率均高于1%菌量的降解率,其中,48h内接种5%菌量的蛋白质和淀粉的降解率分别为35.2%和52.6%。X3914菌株具有较好的氨氮、饲料蛋白质和淀粉的降解能力,在水产养殖上具有潜在的应用价值。     

光呼吸和谷氨酰胺合成酶抑制剂对水稻冠层NH3挥发的影响

在营养液培养条件下,对两个不同氮效率基因型水稻品种扬稻6号和武育粳3号采用光呼吸抑制剂异烟肼（INH）和谷氨酰胺合成酶（GS）抑制剂蛋氨酸亚砜亚胺（MSO）处理,研究其对水稻光合速率、光呼吸速率、GS酶活性及冠层的NH。挥发速率的影响。结果发现：（1）MSO导致剑叶光合速率下降,光呼吸速率升高;INH导致光呼吸速率显著下降,同时一定程度上引起光合速率降低。（2）MSO处理显著降低了GS酶活性,相应地引起NH。挥发速率增加;INH在一定程度上导致NH。挥发速率降低。（3）扬稻6号NH。挥发速率比武育粳3号低的生理原因是光呼吸速率较低和GS酶活性较高。     

Interaction of Cytosolic Glutamine Synthetase of Soybean Root Nodules with the C-terminal Domain of the Symbiosome Membrane Nodulin 26 Aquaglyceroporin

Nodulin 26 (nod26) is a major intrinsic protein that constitutes the major protein component on the symbiosome membrane (SM) of N₂-fixing soybean nodules. Functionally, nod26 forms a low energy transport pathway for water, osmolytes, and NH₃ across the SM. Besides their transport functions, emerging evidence suggests that high concentrations of major intrinsic proteins on membranes provide interaction and docking targets for various cytosolic proteins. Here it is shown that the C-terminal domain peptide of nod26 interacts with a 40-kDa protein from soybean nodule extracts, which was identified as soybean cytosolic glutamine synthetase GS₁β1 by mass spectrometry. Fluorescence spectroscopy assays show that recombinant soybean GS₁β1 binds the nod26 C-terminal domain with a 1:1 stoichiometry (K_d = 266 nm). GS₁β1 also binds to isolated SMs, and this binding can be blocked by preincubation with the C-terminal peptide of nod26. In vivo experiments using either a split ubiquitin yeast two-hybrid system or bimolecular fluorescence complementation show that the four cytosolic GS isoforms expressed in soybean nodules interact with full-length nod26. The binding of GS, the principal ammonia assimilatory enzyme, to the conserved C-terminal domain of nod26, a transporter of NH₃, is proposed to promote efficient assimilation of fixed nitrogen, as well as prevent potential ammonia toxicity, by localizing the enzyme to the cytosolic side of the symbiosome membrane.