Pathotyping of Newcastle disease virus with a filamentous bacteriophage

A filamentous phage bearing the peptide sequence TLTTKLY was isolated from a heptapeptide phage display library against a velogenic Newcastle disease virus (NDV). In order to investigate the potential of this specific phage as an immunological reagent in virus pathotyping, an enzyme-linked immunosorbent assay (ELISA)-based method was developed. This method can differentiate the velogenic strains from the mesogenic and lentogenic strains. An equilibrium-binding assay in solution showed that the interactions between the phage and all the NDV strains gave rise to two widely differing dissociation constants (Kdrel). Based upon the first Kdrel values, NDV strains can be classified into two groups; the first comprises the velogenic strains, and the second consists of the mesogenic and lentogenic strains. These results indicate a high degree of correlation between the binding affinities and pathotyping of NDV strains using the TLTTKLY phage.     

Postnatal periodontal ligament as a novel adult stem cell source for regenerative corneal cell therapy

Corneal opacities are a leading cause of global blindness. They are conventionally treated by the transplantation of donor corneal tissue, which is, restricted by a worldwide donor material shortage and allograft rejection. Autologous adult stem cells with a potential to differentiate into corneal stromal keratocytes (CSKs) could offer a suitable choice of cells for regenerative cell therapy. Postnatal periodontal ligament (PDL) contains a population of adult stem cells, which has a similar embryological origin as CSK, that is cranial neural crest. We harvested PDL cells from young adult teeth extracted because of non‐functional or orthodontic reason and differentiated them towards CSK phenotype using a two‐step protocol with spheroid formation followed by growth factor and cytokine induction in a stromal environment (human amnion stroma and porcine corneal stroma). Our results showed that the PDL‐differentiated CSK‐like cells expressed CSK markers (CD34, ALDH3A1, keratocan, lumican, CHST6, B3GNT7 and Col8A2) and had minimal expression of genes related to fibrosis and other lineages (vasculogenesis, adipogenesis, myogenesis, epitheliogenesis, neurogenesis and hematogenesis). Introduction of PDL spheroids into the stroma of porcine corneas resulted in extensive migration of cells inside the host stroma after 14‐day organ culture. Their quiescent nature and uniform cell distribution resembled to that of mature CSKs inside the native stroma. Our results demonstrated the potential translation of PDL cells for regenerative corneal cell therapy for corneal opacities.     

Gonad maturation and spawning of cobia,Rachycentron canadum (Linnaeus, 1766) off the Dungun coast,Malaysia

The reproductive biology of cobia, Rachycentron canadum, from the coastal waters of Dungun, Malaysia was studied from June 2014 to May 2015. From commercial trawls, a total of 201 samples (combined sexes) were collected (fork lengths [FL] 37.5–124.0 cm; body weights 0.5–20.4 g). The overall sex ratio of females to males was 1:0.9, which was not significantly different (χ² = 2.12, df = 1; p < .05). Estimations of length at 50% maturity (L₅₀) showed that both sexes matured at approximately 75 cm FL; estimated spawning frequency was 6 days. Mean batch fecundity (BF) ranged from 0.55 to 4.32 million eggs. The average number of eggs per gram of ovary was from 2,100 to 5,400 eggs, and relative fecundity 147 eggs/g. There was a weak positive correlation (r² = .48) between BF and female FL as well as BF with an ovary‐free body weight (r² = .56), possibly due to females being in a continuous spawning condition and some possibly half‐spent, based on the histological examination of the female gonads. Despite cobia being asynchronous spawners, the gonadosomatic index in both males and females showed peaks in June, November, and particularly March. Based on histological examination, spawning‐capable males were encountered throughout the study period, whereas spawning‐capable females in the late developing subphase were found mostly in March and April. This is the first study on the reproductive aspects of cobia in Malaysian waters.     

Age,growth and length–weight relationships of Pinna bicolor Gmelin (Bivalvia: Pinnidae) in the seagrass beds of Sungai Pulai Estuary,Johor, Peninsular Malaysia

Age and growth of Pinna bicolor were examined in the seagrass beds of Merambong shoal (N 1°19′55.62″; E 103°35′57.75″) off the south‐western coast of Johor, Peninsular Malaysia between May 2006 and April 2007. Monthly growth increment data of P. bicolor were analyzed using FiSAT software (FAO‐ICLARM Stock Assessment Tools) to estimate the asymptotic length (L_∞) and growth coefficient (K). Average growth rate of P. bicolor was 1.42 (±0.01) cm per month; the estimated asymptotic length (L_∞) and growth coefficient (K) were 34.66 cm and 0.88 per year, respectively. In their natural habitat, P. bicolor attain shell heights of approximately 17, 25 and 30 cm at the end of their first, second and third years of growth. The length–weight relationship was estimated as Log W = ?5.397 + 3.111Log L, and in exponential form the equation was W = 0.000004L^3.111 (r² = 0.99, P < 0.01). Habitat temperature and salinity ranged between 27.47 and 29.66°C and 28.66–33.00 ppt with a mean of 29.10 (±0.66) m°C and 30.52 (±1.41) ppt, respectively.     

Effect of hydrogen sulphide on liver somatic index and Fulton's condition factor in Mystus nemurus

The growth rate and liver somatic index were significantly ( P <0.05) lower in Mystus nemurus exposed to hydrogen sulphide compared to controls. These differences increased with corresponding increases in hydrogen sulphide concentrations. No significant differences ( P >0.05) in Fulton's condition factor were detected between the exposed fish and the controls. The results revealed that liver somatic index is a more sensitive indicator of hydrogen sulphide toxicity compared to Fulton's condition factor.     

The application of an life cycle inventory (LCI) model for solid waste disposal systems in malaysia

This paper discusses the application of an LCt model for solid waste management systems in Malaysia. The model was used to analyze the environmental and economic impacts of municipal waste management systems in Malaysia. In the first part of the study, the LCI model was adapted to analyze waste management systems of four selected cities: Kuala Lumpur and Penang to represent urban areas; Seremban to represent moderately urban areas and Muar to represent rural areas. The results have shown that Kuala Lumpur and Penang had greater Global Warming Potential (GWP) and the costs spent on the solid waste management were also higher as compared to that in suburban areas. In the second part of the study, a detailed evaluation was carried out by analyzing the implication of introducing incineration and composting into the solid waste management system, and the results were compared with the current system, i.e. 100 % landfilled. The relative GWP was lower for incineration, but the cost was extremely high. The results also showed that the final solid waste to be disposed to landfills and the impact due to water emissions could be reduced significantly when incineration and composting were introduced.     

Reduced Newcastle disease virus-induced oncolysis in a subpopulation of cisplatin-resistant MCF7 cells is associated with survivin stabilization

ABSTRACT: BACKGROUND: Cisplatin resistance is a serious problem in cancer treatment. To overcome it, alternative approaches including virotherapy are being pursued. One of the candidates for anticancer virotherapy is the Newcastle disease virus (NDV). Even though NDV's oncolytic properties in various cancer cells have been widely reported, information regarding its effects on cisplatin resistant cancer cells is still limited. Therefore, we tested the oncolytic efficacy of a strain of NDV, designated as AF2240, in a cisplatin-resistant breast cancer cell line. METHODS: Cisplatin-resistant cell line (MCF7-CR) was developed from the MCF7 human breast adenocarcinoma cell line by performing a seven-cyclic exposure to cisplatin. Following NDV infection, fluorescence-activated cell sorting (FACS) analysis and immunoblotting were used to measure cell viability and viral protein expression, respectively. Production of virus progeny was then assessed by using the plaque assay technique. RESULTS: Infection of a mass population of the MCF7-CR with NDV resulted in 50% killing in the first 12 hours post-infection (hpi), comparable to the parental MCF7. From 12 hpi onwards, the remaining MCF7-CR became less susceptible to NDV killing. This reduced susceptibility led to increased viral protein synthesis and virus progeny production. The reduction was also associated with a prolonged cell survival via stabilization of the survivin protein. CONCLUSIONS: Our findings showed for the first time, the involvement of survivin in the reduction of NDV-induced oncolysis in a subpopulation of cisplatin-resistant cells. This information will be important towards improving the efficacy of NDV as an anticancer agent in drug resistant cancers.     

Direct Association of Sprouty-related Protein with an EVH1 Domain (SPRED) 1 or SPRED2 with DYRK1A Modifies Substrate/Kinase Interactions

The mammalian SPRED (Sprouty-related protein with an EVH1 domain) proteins include a family of three members, SPRED1–3. Currently, little is known about their biochemistry. The best described, SPRED1, has been shown to inhibit the Ras/ERK pathway downstream of Ras. All three SPREDs have a cysteine-rich domain (CRD) that has high homology to the CRD of the Sprouty family of proteins, several of which are also Ras/ERK inhibitors. In the belief that binding partners would clarify SPRED function, we assayed for their associated proteins. Here, we describe the direct and endogenous interaction of SPRED1 and SPRED2 with the novel kinase, DYRK1A. DYRK1A has become the subject of recent research focus as it plays a central role in Caenorhabditis elegans oocyte maturation and egg activation, and there is strong evidence that it could be involved in Down syndrome in humans. Both SPRED1 and SPRED2 inhibit the ability of DYRK1A to phosphorylate its substrates, Tau and STAT3. This inhibition occurs via an interaction of the CRD of the SPREDs with the kinase domain of DYRK1A. DYRK1A substrates must bind to the kinase to enable phosphorylation, and SPRED proteins compete for the same binding site to modify this process. Our accumulated evidence indicates that the SPRED proteins are likely physiological modifiers of DYRK1A.     

An overview on transesterification of natural oils and fats

Transesterification of natural oils and fats has found various industrial applications, particularly in producing surfactants and biodiesel fuel. Due to the biodegradability and environmental compatibility of the products, many studies have been conducted in this area. An overview on transesterification of natural oils and fats is presented which includes the following topics: Catalytic and non-catalytic reactions and their optimum reaction conditions; types of catalysts and alcoholysis; reaction kinetics and mass transfer. The reports and findings from these aspects collectively provide useful information and serve as good guidelines for transesterification research.