Modulation of cardiac growth and development by HOP,an unusual homeodomain protein

We have discovered an unusual homeodomain protein, called HOP, which is comprised simply of a homeodomain. HOP is highly expressed in the developing heart where its expression is dependent on the cardiac-restricted homeodomain protein Nkx2.5. HOP does not bind DNA and acts as an antagonist of serum response factor (SRF), which regulates the opposing processes of proliferation and myogenesis. Mice homozygous for a HOP null allele segregate into two phenotypic classes characterized by an excess or deficiency of cardiac myocytes. We propose that HOP modulates SRF activity during heart development; its absence results in an imbalance between cardiomyocyte proliferation and differentiation with consequent abnormalities in cardiac morphogenesis.     

A graphic representation of protein sequence and predicting the subcellular locations of prokaryotic proteins

Zp curve, a three-dimensional space curve representation of protein primary sequence based on the hydrophobicity and charged properties of amino acid residues along the primary sequence is suggested. Relying on the Zp parameters extracted from the three components of the Zp curve and the Bayes discriminant algorithm, the subcellular locations of prokaryotic proteins were predicted. Consequently, an accuracy of 81.5% in the cross-validation test has been achieved using 13 parameters extracted from the curve for the database of 997 prokaryotic proteins. The result is slightly better than that of using the neural network method (80.9%) based on the amino acid composition for the same database. By jointing the amino acid composition and the Zp parameters, the overall predictive accuracy 89.6% can be achieved. It is about 3% higher than that of the Bayes discriminant algorithm based merely on the amino acid composition for the same database. The prediction is also performed with a larger dataset derived from the version 39 SWISS-PROT databank and two datasets with different sequence similarity. Even for the dataset of non-sequence similarity, the improvement can be of 4.4% in the cross-validation test. The results indicate that the Zp parameters are effective in representing the information within a protein primary sequence. The method of extracting information from the primary structure may be useful for other areas of protein studies.     

An overview on predicting the subcellular location of a protein

The present paper overviews the issue on predicting the subcellular location of a protein. Five measures of extracting information from the global sequence based on the Bayes discriminant algorithm are reviewed. 1) The auto-correlation functions of amino acid indices along the sequence; 2) The quasi-sequence-order approach; 3) the pseudo-amino acid composition; 4) the unified attribute vector in Hilbert space, 5) Zp parameters extracted from the Zp curve. The actual performance of the predictive accuracy is closely related to the degree of similarity between the training and testing sets or to the average degree of pairwise similarity in dataset in a cross-validated study. Many scholars considered that the current higher predictive accuracy still cannot ensure that some available algorithms are effective in practice prediction for the higher pairwise sequence identity of the datasets, but some of them declared that construction of the dataset used for developing software should base on the reality determined by the Mother Nature that some subcellular locations really contain only a minor number of proteins of which some even have a high percentage of sequence similarity. Owing to the complexity of the problem itself, some very sophisticated and special programs are needed for both constructing dataset and improving the prediction. Anyhow finding the target information in mature protein sequence and properly cooperating it with sorting signals in prediction may further improve the overall predictive accuracy and make the prediction into practice.     

七个气象因子对海南山蛭种群数量动态影响八年观测研究

在海南岛五指山腹地橡胶林中系统观测海南山蛭种群数量变动8年．对海南山蛭种群数量Y与气候因素X_(1-n)的关系建立逐步最优回归方程Y=b_0 b_1X_1 b_2X_2 …… b_nX_n计算分析采用国际标准化最新版本SAS(6.11)软件进行分析．逐步回归分析表明：1）每年海南山蛭种群数量变动不同,影响其数量变动主要因素是X_1,X_2和X_3.2）雨季（5～10月）种群数量明显大,其主要影响因素是X_1,X_2和X_5,旱季（11月～次年4月）种群数量小,其主要影响因素是X_1.3）8年19条回归方程,7个气象因素中影响种群数量变动的主要气象因素是X_1,X_2和X_5,X_7,与山蛭生物学特性一致,本研究结果为山蛭防治提供科依据．     

NaCl、Na_2SO_4和Na_2CO_3胁迫对小麦叶片自由基含量及质膜透性的比较研究

分别用浓度为２５ｍｍｏｌ／Ｌ、５０ｍｍｏｌ／Ｌ、１００ｍｍｏｌ／Ｌ和２００ｍｍｏｌ／Ｌ的ＮａＣｌ、Ｎａ２ＳＯ４和Ｎａ２ＣＯ３的营养液培养小麦４ｄ,较之不含盐的营养液,其自由基含量上升,产生速率增加,叶片质膜透性增加。不同盐的影响也不同,在低浓度时,ＮａＣｌ的影响大于Ｎａ２ＳＯ４,高浓度时,ＮａＣｌ影响小于Ｎａ２ＳＯ４,Ｎａ２ＣＯ３的影响最为显著。实验结果也表现出小麦叶片自由基含量和质膜透性呈现较好的相关性。因此可认为,盐胁迫促使自由基含量增加,自由基通过过氧化作用影响质膜透性,从而影响植物的生长。     

家兔胚胎细胞核移植的研究(英文)

本研究以兔为实验材料,对细胞核移植过程中显微操作、电融合、电活化以及移核胚的培养等基本问题进行了研究。对兔进行ＰＭＳＧｈＣＧ超数排卵,收集成熟卵母细胞和１６细胞胚;后者经胰蛋白酶消化,去除胶膜和透明带,在不含Ｃａ２＋、Ｍｇ２＋的分离液中分成单个卵裂球;然后,分别对两者做ＣＢ预处理;首次尝试采用Ｗｉｌａｄｓｅｎ法,去除卵母细胞核、并将单个卵裂球注入透明带,同时、与ＭｃＧｒａｔｈＳｏｌｔｅｒ法进行比较;通过电融合使供体核进入去核的卵母细胞内;将所得移核胚在体外或在中间受体内培养并观察。结果表明：一、Ｗｉｌａｄｓｅｎ法与ＭｃＧｒａｔｈＳｏｌｔｅｒ法比较,核移植操作的成功率及以后的电融合率均无明显差异（Ｔａｂ．１）。相对于后者,Ｗｉｌａｄｓｅｎ法更简便、易于掌握并提高去核率。二、ｈＣＧ超排注射后１３～１５ｈ,观察卵母细胞发现：其中,６７８％保留有第一极体。此时的卵子若去除１／３胞质量,去核率可以达到５８３％。若推迟去核时间,笫一极体退化,失去去核标志。三、比较不同电脉冲条件,发现强度为０６３ｋｖ／ｃｍ,持续１６０μｓ的一次电脉冲可获较高移核胚的融合率（７０．８％）（Ｔａｂ．２）;并可使６１１％的成熟     

NaCl、Na2 SO4 和Na2GO3 胁迫对小麦叶片自由基含量及质膜透性的比较研究

 分别用浓度为25mmol／L、50mmol／L、100 mmol／L和200 MMOL／l的Nacl、Na2SO4和Na2CO3的营养液培养小麦4d,较之不含盐的营养液,其自由基含量上升,产生速率增加,叶片质膜透性增加。不同盐的影响也不同,在低浓度时,NaCl的影响大于Na2SO4,高浓度时,NaCl影响小于Na2CO3,Na2CO3的影响最为显著。实验结果也表现出小麦叶片自由基含量和质膜透性呈现较好的相关性。因此可认为,盐胁迫促使自由基含量增加,自由基通过过氧化作用影响质膜透性,从而影响植物的生长。     

一种简单、经济的植物RNA抽提方法

一种简单、经济的植物ＲＮＡ抽提方法孟玲谭德勇王焕效吕朝晖王晓燕周翔（云南大学生物系,昆明６５００９１）ＡＳｉｍｐｌｅＥｃｏｎｏｍｉｃａｌＭｅｔｈｏｄｆｏｒｔｈｅＩｓｏｌａｔｉｏｎｏｆＰｌａｎｔＲＮＡＭＥＮＧＬｉｎｇＴＡＮＤｅｙｏｎｇＷＡＮＧＨｕａｎｘ...     

凋亡而不出现DNA梯形带一例

用普通琼脂糖凝胶电泳UVB照射后分别培养24、36小时的NIH3T3细胞DNA,均未出现梯形带,但从细胞形态上看,大部分细胞发生凋亡并出现凋亡小体。电泳UVB照射后培养24小时的昆明小鼠胸腺细胞DNA,出现典型的凋亡梯形带。说明细胞在发生凋亡时DNA并不总是从核小体之间断裂的,不能把DNA梯形带作为判断细胞凋亡的唯一标准。     

基于共生理论的兵团与地方城市“三生”功能跨界整合发展研究

基于共生理论，选取乌鲁木齐市、五家渠市、昌吉市为研究案例区，构建"三生"空间评价指标体系及"三生"功能评价指标体系，探讨乌五昌地区"三生"空间时空分异格局，借助共生度模型，识别兵团城市与地方城市"三生"功能共生发展模式，并对兵地城市跨界融合发展提供理论建议。结果表明：（1）研究区生产和生活空间面积呈上升趋势，生态空间面积呈下降趋势。（2）在生产功能方面，五家渠市与乌鲁木齐市、昌吉市共生模式分别为正向非对称共生、反向非对称共生，生活功能与生态功能方面，均为正向非对称共生，各功能城市间影响程度不同。（3）基于"三生"空间格局及"三生"功能共生模式，提出兵地融合发展建议，生产方面建立四区，三轴，一基地，生活方面加强交通路网建设，生态方面兵地协同建立生态保护区。