Impact of ambient and supplemental ultraviolet-B stress on kidney bean plants: an insight into oxidative stress management

In the present study, the response of kidney bean (Phaseolus vulgaris L. cv. Pusa Komal) plants was evaluated under three different levels of ultraviolet-B (UV-B), i.e., excluded UV-B (eUV-B), ambient UV-B (aUV-B; 5.8 kJ m^?2 day^?1), and supplemental UV-B (sUV-B; 280–315 nm; ambient?+?7.2 kJ m^?2 day^?1), under near-natural conditions. eUV-B treatment clearly demonstrated that both aUV-B and sUV-B are capable of causing significant changes in the plant’s growth, metabolism, economic yield, genome template stability, total protein, and antioxidative enzyme profiles. The experimental findings showed maximum plant height at eUV-B, but biomass accumulation was minimum. Significant reductions in quantum yield (Fv/Fm) were observed under both aUV-B and sUV-B, as compared to eUV-B. UV-B-absorbing flavonoids increased under higher UV-B exposures with consequent increments in phenylalanine ammonia lyase (PAL) activities. The final yield was significantly higher in plants grown under eUV-B, compared to those under aUV-B and sUV-B. Total protein profile through sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and analysis of isoenzymes, like superoxide dismutase (SOD), peroxidase (POX), catalase (CAT), ascorbate peroxidase (APX), guaiacol peroxidase (GPX), and glutathione reductase (GR), through native PAGE revealed major changes in the leaf proteome under aUV-B and sUV-B, depicting induction of some major stress-related proteins. The random amplified polymorphic DNA (RAPD) profile of genomic DNA also indicated a significant reduction of genome template stability under UV-B exposure. Thus, it can be inferred that more energy is diverted for inducing protection mechanisms rather than utilizing it for growth under high UV-B level.     

Genome-wide analysis of the stress associated protein (SAP) gene family containing A20/AN1 zinc-finger(s) in rice and their phylogenetic relationship with Arabidopsis

Proteins with the A20/AN1 zinc-finger domain are present in all eukaryotes and are well characterized in animals, but little is known about their function in plants. Earlier, we have identified an A20/AN1 zinc-finger containing stress associated protein 1 gene (SAP1) in rice and validated its function in abiotic stress tolerance. In this study, genome-wide survey of genes encoding proteins possessing A20/AN1 zinc-finger, named SAP gene family, has been carried out in rice and Arabidopsis. The genomic distribution and gene architecture as well as domain structure and phylogenetic relationship of encoded proteins numbering 18 and 14 in rice and Arabidopsis, respectively, have been studied. Expression analysis of the rice SAP family was done to investigate their response under abiotic stress conditions. All the genes were inducible by one or the other abiotic stresses indicating that the OsSAP gene family is an important component of stress response in rice. Manipulation of their expression and identification of their superior alleles should help confer stress tolerance in target crops.Electronic supplementary material Supplementary material is available in the online version of this article at and is accessible for authorized users.     

Terpenoid lactones as plant growth regulators

Plant growth regulating activity of dehydrocostus lactone possessing an α-methylene-γ-lactone moiety has been compared with its two derived C-16 lactones, in which a trisubstituted double bond and a cyclopropane ring are conjugated with the lactone carbonyl. The results show that the two latter compounds are slightly more active than dehydrocostus lactone.     

Some factors affecting size distribution and density of grass shrimp (Palaemonetes pugio) populations in two New Jersey estuaries

Mature Palaemonetes pugio, from a polluted estuary, Piles Creek (PC) are larger than those in a more pristine estuary in Tuckerton (TK). Possible causes for the differences in size-structure could be differences in environmental factors at the two creeks, differential competition at the two sites, inherent factors causing a greater growth rate in the PC population, differences in reproductive timing, or differential predation at the two sites. Lab microcosm studies were used to examine the possibility of inherent population differences or environmental conditions (including differences in salinity) causing faster growth in PC. There was no evidence that PC shrimp grew faster than TK shrimp, nor that PC conditions fostered greater growth compared to TK. Salinity adjustments in PC and TK tanks also had no effect on growth. Therefore, it appears that genetic and environmental factors did not play a significant role in greater shrimp growth in PC. In the field, data on relative abundances of Fundulus heteroclitus and P. pugio, and size-frequency distributions of P. pugio were collected from the two estuaries. Gravid females and recruits of young shrimp physically appeared at approximately the same time within both systems, eliminating earlier reproduction as a cause of the size discrepancy. There were three times as many shrimp in PC than in TK (eliminating the possibility of increased population density and competition at TK as a cause) and three times as many F. heteroclitus present in TK than in PC. Since it has already been established that the Fundulus at PC are smaller than at TK and that they are poor predators, differences in Fundulus predation would appear to be an important factor in determining the number and size-frequency of the grass shrimp.     

Intense green light emission and thermoluminescence glow curve analysis of Tb3+-activated CaY2O4 phosphor

Here, the synthesis and luminescence analysis of the Tb³⁺-activated phosphor were reported. The CaY₂O₄ phosphors were synthesized using a modified solid-state reaction method with a variable doping concentration of Tb³⁺ ion (0.1–2.5 mol%). As synthesized, the phosphor was characterized using Fourier transform infrared spectroscopy (FTIR) and X-ray diffraction analysis techniques for the optimized concentration of doping ions. The prepared phosphor showed a cubic structure, and FTIR analysis confirmed functional group analysis. It was discovered that the intensity of 1.5 mol% was higher than at other concentrations after the photoluminescence (PL) excitation and emission spectra were recorded for different concentrations of doping ions. The excitation was monitored at 542 nm, and the emission was monitored at 237 nm. At 237 nm excitation, the emission peaks were found at 620 nm (⁵D₄→⁷F₃), 582 nm (⁵D₄→⁷F₄), 542 nm (⁵D₄→⁷F₅), and 484 nm (⁵D₄→⁷F₆). The 1931 CIE (x, y) chromaticity coordinates showed the distribution of the spectral region calculated from the PL emission spectra. The values of (x = 0.34 and y = 0.60) were very close to dark green emission. Therefore, the produced phosphor would be very useful for light-emitting diode (green component) applications. Thermoluminescence glow curve analysis for various concentrations of doping ions and various ultraviolet (UV) exposure times was carried out, and a single broad peak was found at 252°C. The computerized glow curve deconvolution method was used to obtain the related kinetic parameters. The prepared phosphor exhibited an excellent response to UV dose and could be useful for UV ray dosimetry.     

Modal affinities of endplate acetylcholine receptors caused by loop C mutations

The time course of the endplate current is determined by the rate and equilibrium constants for acetylcholine receptor (AChR) activation. We measured these constants in single-channel currents from AChRs with mutations at the neurotransmitter-binding sites, in loop C. The main findings are: (a) Almost all perturbations of loop C generate heterogeneity in the channel open probability (“modes”). (b) Modes are generated by different affinities for ACh that can be either higher or lower than in the wild-type receptors. (c) The modes are stable, in so far as each receptor maintains its affinity for at least several minutes. (d) Different agonists show different degrees of modal activity. With the loop C mutation αP197A, there are four modes with ACh but only two with partial agonists. (e) The affinity variations arise exclusively from the αδ-binding site. (f) Substituting four γ-subunit residues into the δ subunit (three in loop E and one in the β5–β5′ linker) reduces modal activity. (g) At each neurotransmitter-binding site, affinity is determined by a core of five aromatic residues. Modes are eliminated by an alanine mutation at δW57 but not at the other aromatics. (h) Modes are eliminated by a phenylalanine substitution at all core aromatics except αY93. The results suggest that, at the αδ agonist site, loop C and the complementary subunit surface can each adopt alternative conformations and interact with each other to influence the position of δW57 with respect to the aromatic core and, hence, affinity.     

Kinases and protein motifs required for AZI1 plastid localization and trafficking during plant defense induction

The proper subcellular localization of defense factors is an important part of the plant immune system. A key component for systemic resistance, lipid transfer protein (LTP)-like AZI1, is needed for the systemic movement of the priming signal azelaic acid (AZA) and a pool of AZI1 exists at the site of AZA production, the plastid envelope. Moreover, after systemic defense-triggering infections, the proportion of AZI1 localized to plastids increases. However, AZI1 does not possess a classical plastid transit peptide that can explain its localization. Instead, AZI1 uses a bipartite N-terminal signature that allows for its plastid targeting. Furthermore, the kinases MPK3 and MPK6, associated with systemic immunity, promote the accumulation of AZI1 at plastids during priming induction. Our results indicate the existence of a mode of plastid targeting possibly related to defense responses.     

Milk fermented with probiotic strains Lactobacillus rhamnosus MTCC: 5957 and Lactobacillus rhamnosus MTCC: 5897 ameliorates the diet-induced hypercholesterolemia in rats

The current study was intended to investigate the cholesterol-lowering potential of the two Lactobacillus rhamnosus probiotic strains, LR 5957 and LR 5897, isolated from ‘dahi’. Cholesterol-lowering ability of both strains was determined in in vitro conditions. For in vivo investigations, the Wistar rats were randomly assigned into five groups and treated with different diets: standard diet (SD), high-cholesterol diet (HCD), HCD with Milk, HCD with LR 5957–fermented milk, and HCD with LR 5897–fermented milk. After 3 months of feeding, different parameters of hypercholesterolemia were measured in blood, feces, liver, and kidney. Both the strains, LR 5957 and LR 5897, showed the ability to grow in the presence of cholesterol and eliminate the cholesterol under in vitro conditions. In vivo results indicate that consumption of probiotic-fermented milk has significantly reduced the HCD-induced body weight, hyperlipidemia, and hepatic lipids (total cholesterol and triacylglycerol). Further, increased cholesterol excretion in feces was also observed in probiotic-fed groups. The studied fermented milk also helped to maintain healthy liver and kidney by increasing the antioxidant activities and decreasing the lipid peroxidation. Consumption of probiotic-fermented milk also found to decrease the mRNA expression of the inflammatory markers TNF-α and IL-6 in the liver. Overall, our results indicate that the L. rhamnosus strains, LR 5957 and LR 5897, are two potential probiotic strains that can ameliorate the diet-induced hypercholesterolemia.