Origin and radiation of the house mouse: clues from nuclear genes

Although quite a lot is known about the genetic structure of the polytypic species Mus musculus at the periphery of its range, the centre of origin and dispersion of the species remains unknown. To investigate the amount of genetic subdivision that occurs in the central parts of its range, we analysed the genetic variation in four new samples of mice coming from Iran, Pakistan, northern and southern India using 35 autosomal protein loci and restriction fragment length polymorphisms of three genes of the Vβ gene complex of the immune system. The variation was then compared with that found in the subspecies occupying the peripheral regions of the species range. The two samples from the northern part of the Indian subcontinent were shown to be more heterozygous than the samples from any of the other regions. They also contain the majority of the alleles that exist in the differentiated subspecies at the periphery of the species range. A neighbour-joining analysis on Nei's genetic distances and a factorial analysis of correspondences on the allelic composition of each sample both place the Pakistani and Indian populations in a phylogenetically and genetically central position compared to the peripheral subspecies. These results suggest that the populations in this geographically central area have retained most of the ancestral polymorphisms, which in turn indicates that the Indian subcontinent is probably the cradle of the species. The nature of the genetic relationships between the various populations throughout the species range and the possibility that they form an incipient ring species are also discussed. Our results are in agreement with the classical model of geographic differentiation where genetic divergence in allopatry is considered to be the prime cause of subspecies formation that may eventually lead to partial reproductive isolation on secondary contact.     

Preparation and Regeneration of Mycelial Protoplasts of Alternaria eichhomiae

Preparation and regeneration of mycelial protoplasts from Alternaria eichhorniae were examined. A commercially available muralytic enzyme, Novozym 234, was used for isolation of protoplasts. The mycelial age and the pH of the stabilized buffer affected the formation of protoplasts. The maximum production of protoplasts (3,9 × 10⁸/g fresh weight mycelia) was obtained from 24-h-old mycelia digested with Novozym 234 (20 mg/ml) in a stabilized buffer of pH 6.4 and incubated in the dark at 30°C on a rotary shaker (90 r.p.m.) for 6 h. Morphological characteristics of the protoplasts varied and depended on the age of the mycelia used in protoplast production. Moreover, mycelial age had a highly significant influence (P = 0.0001) on the frequency of protoplast regeneration.     

Alternaria infectoria , a Promising Biological Control Agent for the Fig Wax Scale, Ceroplastes rusci (Homoptera: Coccidae), in Egypt

Alternaria infectoria E . G . Simmons was isolated from naturally infected eggs of the fig wax scale insect , Ceroplastes rusci L . (Homoptera: Coccidae) , that were showing different degrees of shriveling . This fungus proved to be pathogenic to eggs , nymphs and adults of this pest . The fungus had significant effects on both the mortality and hatchability of the eggs ( P = 0 . 0001) . Three days after exposure to the fungus , nearly one - third (31 . 5%) of the fungus - treated eggs became discolored and 17% showed moderate shrinking but no mortality . Fifteen days post - application , 91% of the fungus - treated eggs were diseased (74 . 8% of them were dead) due to A. infectoria, while no disease developed on the untreated eggs . Hatching decreased by 39 . 6% over a 15 - day period in the fungus - treated eggs compared to the control . Additionally , crawlers hatching from fungus - treated eggs became infected . The fungus seemed to induce crawlers to enter the settling stage . Seventy - two per cent of the fungus - treated crawlers versus 9% of the untreated controls entered the settling stage 6 days after exposure to the fungal inoculum . The highest level of nymphal mortality attributed to A. infectoria occurred when 30% (wet w:v blended mycelium in water containing 0 . 5% w:v Metamucil) inoculum was applied , and a high relative humidity was maintained for the following 48 h . This is the first record of A. infectoria on the fig wax scale and for the genus Alternaria as an entomopatho genic fungus .     

pH inhibition of yeast ethanol fermentation in continuous culture

Summary In a low dilution rate study an unexpected pH-related inhibition of yeast fermentation was found. A higher volumetric rate of ethanol production occurred at lower pH values (2.8 to 3.2), suggesting a low optimum pH.Notation Ki product inhibition constant, L/g - Ks substrate saturation constant, g/L - P product (ethanol) concentration, g/L - S substrate (glucose) concentration, g/L - specific growth rate, h^–1 - ₀ maximum specific growth rate, h^–1     

Physiological mechanism of toxic action of DDT and endrin in two euryhaline freshwater fishes, Anguilla vulgaris and Mugil cephalus

RBC counts, Ht value and Hb content in both species exposed to DDT and endrin concentrations were not significantly different from those of controls. WBC counts in both species exposed to the two pesticides for 96 hr decreased significantly at different concentrations. The variance ratios of cations and anions were consistently more concentrated in the serum of DDT- and endrin-exposed fishes. Serum cholesterol was sharply elevated in all the lots exposed to pesticides. Exposure to sublethal concentrations of DDT and endrin impaired liver function, as evidenced by the transfer of major cations from hepatic tissue to the serum and by elevated serum cholesterol.     

Culture Independent Diversity of Bacterial Communities Indigenous to Lower Altitude at Laohugou Glacial Environment

Abstract

High-throughput sequencing approach of the 16S rRNA gene was employed to evaluate the bacterial diversity inhabit in melted water, snow, soil, and rocks samples at the lower altitudes of the Laohugou glacial environment. Bioinformatics tools were used to process millions of Illumina reads for alpha and beta diversities of bacterial communities. The diversity indices such as Chao, Shannon, and Simpson were different in the collected samples and solid samples (soil and rocks) showed higher taxon richness and evenness. Taxonomic diversity was unexpectedly higher and the major portion of sequences was assigned to Proteobacteria, Actinobacteria, and Acidobacteria. Higher variation in community structure was reported at the class level and Alphaproteobacteria was dominant. The solid niches were occupied by a higher number of phyla compared with liquid. The physicochemical variables acted as spatial gradients and associated with the bacterial structural communities of the glacial ecosystem. Findings showed that both Proteobacteria and Actinobacteria in solid samples influenced the bacterial community structure in downstream liquid samples. Interestingly, the metagenomic biomarkers were higher in liquid samples. This study provides precious datasets to understand the bacterial community in a better way under the influence of spatial, physical and environmental factors.     

Subtractive Proteomics and Immuno-informatics Approaches for Multi-peptide Vaccine Prediction Against Klebsiella oxytoca and Validation Through In Silico Expression

International Journal of Peptide Research and Therapeutics - Klebsiella oxytoca is a gram-negative bacterium. It is opportunistic in nature and causes hospital acquired infections....