Crystalline A-dna: the X-ray analysis of the fragment d(G-G-T-A-T-A-C-C)

An A-DNA type double helical conformation was observed in the single crystal X-ray structure of the octamer d(G-G-T-A-T-A-C-C), 1, and its 5-bromouracil-containing analogue, 2. The structure of the isomorphous crystals (space group P61) was solved by a search technique based on packing criteria and R-factor calculations, with use of only low order data. At the present stage of refinement the R factors are 31% for 1 and 28% for 2 at a resolution of 2.25 A (0.225 nm). The molecules interact through their minor grooves by hydrogen bonding and base to sugar van der Waals contacts. The stable A conformation observed in the crystal may have some structural relevance to promoter regions where the T-A-T-A sequence is frequently found.     

Feulgen Staining of Rabbit Spermatozoa: Hydrolysis Time and Distribution of Chromatin

A period of 12-16 min was found to be optimum for hydrolysis, in 1 N HCl at 60 C, of rabbit spermatozoa for quantitative Feulgen staining. The gradient of optical density along the longitudinal axis of Feulgen-stained rabbit sperm cell nuclei followed a typical pattern, deviating from a linear regression. A 2 μ diameter spot centered at the midpoint of the nucleus with uniform density approximating the mean density was present in most of the cells measured. This central spot can be used with reliance in DNA assays using light beam core sampling methods of microspectrophotometry.     

Roots1

ABSTRACT Many unicellular eukaryotic organisms possess complex fiber systems that organize and anchor the flagellar basal apparatus in the cell [20, 24]. In 1978 we first published the observation that one of these fiber systems, the striated flagellar root of the quadriflagellate green alga Tetraselmis subcordiformis (=Platymonas subcordiformis), is a contractile organelle [31]. We subsequently found that striated flagellar roots are composed, in part, of the Ca²⁺-binding protein centrin [30]. Since that time, centrin has been found to be a ubiquitous component of the flagellar basal apparatus, basal bodies and centrioles, and centrosomes and mitotic spindle poles of eukaryotic cells (for general reviews see [28, 34]). While we have learned a great deal about centrin from other organisms, our earliest success in understanding the biology of centrin was in large part due to the extraordinary extent to which Tetraselmis cells have elaborated their centrin-based organelles. In this paper, I will return attention to several unanswered questions concerning Tetraselmis striated flagellar root behavior and I will suggest several new directions that students may wish to pursue in order to tease fresh insights from this fascinating organism.     

Flagellar root contraction and nuclear movement during flagellar regeneration in Chlamydomonas reinhardtii

When Chlamydomonas cells are deflagellated by pH shock or mechanical shear the nucleus rapidly moves toward the flagellar basal apparatus at the anterior end of the cell. During flagellar regeneration the nucleus returns to a more central position within the cell. The nucleus is connected to the flagellar apparatus by a system of fibers, the flagellar roots (rhizoplasts), which undergo a dramatic contraction that coincides with anterior nuclear movement. A corresponding extension of the root system, back to its preshock configuration is observed as the nucleus retracts to a central position. Anterior displacement of the nucleus and flagellar root contraction require free calcium in the medium. Nuclear movement and flagellar root contraction and extension are not sensitive to inhibitors of protein synthesis (cycloheximide), or drugs that influence either microtubules (colchicine) or actin-based microfilaments (cytochalasin D). Detergent-extracted cell models contract and extend their flagellar roots and move their nuclei in response to alterations of free calcium levels in the medium. Cycles of nuclear movement in detergent-extracted models require ATP to potentiate the contractile mechanism for subsequent calcium-induced contraction. Flagellar root contraction and nuclear movement in Chlamydomonas may be causally related to signaling of induction of flagellar precursor genes or to the transport of flagellar precursors or their messages to sites of synthesis or assembly near the basal apparatus of the cell.