Changes in cell dimensions during amino acid starvation of Escherichia coli.

Electron microscopic analysis was used to study cells of Escherichia coli B and K-12 during and after amino acid starvation. The results confirmed our previous conclusion that cell division and initiation of DNA replication occur at a smaller cell volume after amino acid starvation. Although during short starvation periods, the number of constricting cells decreased due to residual division, it appears that during prolonged starvation, cells of E. coli B and K-12 were capable of initiating new constrictions. During amino acid starvation, cell diameter decreased significantly. The decrease was reversed only after two generation times after the resumption of protein synthesis and was larger in magnitude than that previously observed before division (F. J. Trueba and C. L. Woldringh, J. Bacteriol. 142:869-878, 1980). This decrease in cell diameter correlates with synchronization of cell division which has been shown to occur after amino acid starvation.     

Phonotaxis in flying crickets: Neural correlates

Tethered, flying crickets perform stereotyped steering movements when stimulated with sound. Electrophysiological recordings show that identifiable motoneurones respond to acoustic stimulation in a manner which reflects the phonotactic behaviour of the intact cricket. Both steering behaviour and its neural correlates reflect the fine temporal structure of the acoustic stimulus. Decapitation of the cricket eliminates steering movements in response to sound.     

Isolation and properties of Tn10 insertions in the rac locus of Escherichia coli

Summary Two Tn10 insertions that are in the rac locus of the chromosome of Escherichia coli have been isolated and characterized. These insertions are located at min 29.7 and min 30.0. The insertions are stable when an F123 rac::Tn10 episome is transferred to an F^- rac ⁺ recipient, but they are lost at a high frequency when transferred to an F^- rac ^- recipient. This latter condition has been previously, demonstrated to cause the excision of the rac locus. The Tn10 insertions are also lost at a high frequency when strains containing them are lysogenized with reverse. If the lysogens that have lost the Tn10 insertion are subsequently cured of reverse, the cells no longer contain sequences homologous with rac locus DNA. These strains were rac ^- when tested for recombination activation (Low 1973), and this procedure consequently provides a simple means to make isogenic rac ^- and rac ^- strains.     

Initiation of deoxyribonucleic acid replication in Escherichia coli B: uncoupling from mass/deoxyribonucleic acid ratio.

In Escherichia coli growing at different rates, the ratio of cell mass to the number of chromosome origins tended to be constant at the time of the initiation of deoxyribonucleic acid (DNA) replication. This observation led to the assumption that the initiation event is controlled in some way by cell mass, e.g., by a growth-dependent synthesis of an initiator or dilution of a repressor. We have now found that the initiation of DNA synthesis can be uncoupled from cell mass. We used a synchronous culture of newly divided cells of E. coli B which was obtained by the membrane elution technique (C.E. Helmstetter, J. Mol. Biol. 24: 417-427, 1967) and was starved for an amino acid. Upon restoration of the amino acid, the cells not only divided at a size that was smaller than normal, but also initiated DNA replication long before they could increase their masses to reach the expected ratio of mass/DNA presumably required for initiation.     

Tubulin synthesis and heat shock-induced cell synchrony in Tetrahymena

This paper offers the suggestion that heat shock inhibition of tubulin synthesis accounts for the molecular mechanism by which periodic heat shocks induce cell synchrony in Tetrahymena. Each heat shock (34 °C) represses tubulin synthesis and blocks the division cycle at the point when the oral structure, rich in microtubules, would normally begin to assemble. Recovery (at 28 °C) from each heat shock is characterized by parallel derepression of tubulin synthesis and of oral development. Changes in protein synthesis patterns are complex when the temperature is shifted up and down between 28 and 34 °C and further experimental support is required in support of the hypothesis here forwarded.     

Behavioral responses to intracerebroventricularly administered neurohypophyseal peptides in mice

Lysine vasopressin (LVP), arginine vasopressin, oxytocin, and arginine vasotocin administered intraventricularly (icv) to mice all provoked a dose-dependent behavioral response in the range 0.1 – 1.0 μg. This response included a pronounced hyperactivity, extensive foraging, increased grooming, and at higher doses, stereotyped scratching, squeaking, and occasional barrel rolling. The four hormones were all approximately equipotent. Desglycinamide lysine vasopressin and [desaminocys₁, D-Arg₈] vasopressin produced some of the characteristic behaviors, but were much less potent. While pretreatment of the animals with reserpine (5 mg/kg ip), haloperidol (0.5 mg/kg ip), or physostigmine (0.5 mg/kg ip) sedated the animals and attenuated the locomotion and grooming, these drugs did not substantially alter the characteristic behavioral responses to LVP. Pretreatment with α-methyl-p-tyrosine (400 mg/kg ip), p-chlorophenylalanine (320 mg/kg ip), 6-hydroxydopamine (100 μg icv), ergotamine (0.5 μg icv), ethoxolamide (52 ng icv), diphenhydramine (20 μg icv), prostaglondin F_2α (2 μg icv), or naloxone (1 mg/kg ip) did not alter the LVP-induced behaviors. None of these drugs or -amphetamine (0.5 to 20 mg/kg ip) or nicotine (0.1 or 1 μg icv) mimicked the behavioral effects of the hormones.     

Who is Responsible for Fission in a Free-ranging Troop of Baboons?

The study troop of chacma baboons (Papio cynocephalus ursinus) at Mkuzi Game Reserve, Zululand, South-Africa, comprised of about 76 members that split into two new troops. The events leading to this troop fission will be described and its possible causes will be discussed. Troop fission among baboons is generally attributed to the withdrawal of low-ranking females from the main group, as a result of the cost of food competition and its effect on their reproductive success. At Mkuzi, no evidence for food competition among females was recorded in terms of rank-related time spent feeding or other time—budget components, feeding-bout length, diet composition or context of female aggression. Moreover, no evidence for rank-related differential reproductive success was found in terms of inter-birth intervals or infant survival. Female mortality was, however, related to dominance rank, with circumstantial evidence suggesting that cause of mortality was predation by leopards. Rate of female disappearances, aggression levels among females, and the percentage of time they spent in proximity to other adult troop members increased after fission. Relatively short inter-birth intervals and extremely low infant mortality rate at Mkuzi resulted in a small number of receptive females at any one time, and therefore in high costs of male sexual competition as expressed in the high levels of male aggression and woundings, both reduced after fission. It is suggested that this troop fission may have been initiated by the resident males, triggered by the high cost of sexual competition, and forced on the females, who were, consequently, subjected to higher risk of predation. The troop fission was preceded by a long process of increasing tendency for sub-trooping. It was initiated by the four resident males who kept a large distance apart from each other, herded oestrous female associates away from others and were followed by other females. The females generally tended to stay close to associates, males and females. These parties were followed by the peripheral and immigrant males who had no female associates, and eventually two distinct daughter troops were formed.     

Integrated analysis of numerous heterogeneous gene expression profiles for detecting robust disease-specific biomarkers and proposing drug targets

Genome-wide expression profiling has revolutionized biomedical research; vast amounts of expression data from numerous studies of many diseases are now available. Making the best use of this resource in order to better understand disease processes and treatment remains an open challenge. In particular, disease biomarkers detected in case–control studies suffer from low reliability and are only weakly reproducible. Here, we present a systematic integrative analysis methodology to overcome these shortcomings. We assembled and manually curated more than 14 000 expression profiles spanning 48 diseases and 18 expression platforms. We show that when studying a particular disease, judicious utilization of profiles from other diseases and information on disease hierarchy improves classification quality, avoids overoptimistic evaluation of that quality, and enhances disease-specific biomarker discovery. This approach yielded specific biomarkers for 24 of the analyzed diseases. We demonstrate how to combine these biomarkers with large-scale interaction, mutation and drug target data, forming a highly valuable disease summary that suggests novel directions in disease understanding and drug repurposing. Our analysis also estimates the number of samples required to reach a desired level of biomarker stability. This methodology can greatly improve the exploitation of the mountain of expression profiles for better disease analysis.