A familial mutation in the testis-determining gene SRY shared by both sexes

A familial mutation in SRY, the gene coding for the testis-determining factor TDF, was identified in an XY female with gonadal dysgenesis, her father, her two brothers and her uncle. The mutation consists of a T to C transition in the region of the SRY gene coding for a protein motif known as the high mobility group (HMG) box, a protein domain known to confer DNA-binding specificity on the SRY protein. This point mutation results in the substitution, at amino acid position 109, of a serine residue for phenylalanine, a conserved aromatic residue in almost all HMG box motifs known. This F109S mutation was not found in 176 male controls. When recombinant wildtype SRY and SRY^F109S mutant protein were tested in vitro for binding to the target site AAC AAAG, no differences in DNA-binding activity were observed. These results imply that the F109S mutation either is a rare neutral sequence variant, or produces an SRY protein with slightly altered in vivo activity, the resulting sex phenotype depending on the genetic back-ground or environmental factors.This paper is dedicated by G. S. to Professor Ulrich Wolf on the occasion of his 60th birthday     

Snapshot prediction of carbon productivity,carbon and protein content in a Southern Ocean diatom using FTIR spectroscopy

Diatoms, an important group of phytoplankton, bloom annually in the Southern Ocean, covering thousands of square kilometers and dominating the region''s phytoplankton communities. In their role as the major food source to marine grazers, diatoms supply carbon, nutrients and energy to the Southern Ocean food web. Prevailing environmental conditions influence diatom phenotypic traits (for example, photophysiology, macromolecular composition and morphology), which in turn affect the transfer of energy, carbon and nutrients to grazers and higher trophic levels, as well as oceanic biogeochemical cycles. The paucity of phenotypic data on Southern Ocean phytoplankton limits our understanding of the ecosystem and how it may respond to future environmental change. Here we used a novel approach to create a ‘snapshot'' of cell phenotype. Using mass spectrometry, we measured nitrogen (a proxy for protein), total carbon and carbon-13 enrichment (carbon productivity), then used this data to build spectroscopy-based predictive models. The models were used to provide phenotypic data for samples from a third sample set. Importantly, this approach enabled the first ever rate determination of carbon productivity from a single time point, circumventing the need for time-series measurements. This study showed that Chaetoceros simplex was less productive and had lower protein and carbon content during short-term periods of high salinity. Applying this new phenomics approach to natural phytoplankton samples could provide valuable insight into understanding phytoplankton productivity and function in the marine system.     

Statistical Mechanics of Zooplankton

Statistical mechanics provides the link between microscopic properties of many-particle systems and macroscopic properties such as pressure and temperature. Observations of similar “microscopic” quantities exist for the motion of zooplankton, as well as many species of other social animals. Herein, we propose to take average squared velocities as the definition of the “ecological temperature” of a population under different conditions on nutrients, light, oxygen and others. We test the usefulness of this definition on observations of the crustacean zooplankton Daphnia pulicaria. In one set of experiments, D. pulicaria is infested with the pathogen Vibrio cholerae, the causative agent of cholera. We find that infested D. pulicaria under light exposure have a significantly greater ecological temperature, which puts them at a greater risk of detection by visual predators. In a second set of experiments, we observe D. pulicaria in cold and warm water, and in darkness and under light exposure. Overall, our ecological temperature is a good discriminator of the crustacean’s swimming behavior.     

Comparison of factor IX methylation on human active and inactive X chromosomes: implications for X inactivation and transcription of tissue-specific genes.

Maintenance of dosage compensation for housekeeping genes on the human X chromosome is mediated through differential methylation of clustered CpG nucleotides associated with these genes. To determine if methylation has a role in maintaining inactivity of X-linked genes which show tissue-specific expression, we examined the locus for blood clotting Factor IX. The analysis encompassed 91% of the HpaII and HhaI sites in the 41-kb region that includes the presumed promoter region, 5 kb of 5'- and 4 kb of 3'-flanking sequences. Although there are sex differences in methylation of the locus in leukocytes, the methylation pattern in liver, where the gene is expressed, is essentially the same for loci on the active and inactive X chromosome. The lack of differences in methylation of active and inactive genes makes it unlikely that methylation within the locus has a role in expression of the Factor IX gene. These findings, along with the absence of clustered CpG dinucleotides within the Factor IX locus, suggest that functional differences in DNA methylation related to X chromosome dosage compensation may be limited to CpG clusters. In any event, dosage compensation seems to be maintained regionally, rather than locus by locus.     

Hydrogen metabolism of the unicellular cyanobacterium Chroococcidiopsis thermalis ATCC29380

Abstract Hydrogenase was induced in the unicellular cyanobacterium Chroococcidiopsis thermalis ATCC29380 when grown aerobically in a medium lacking combined nitrogen. Nitrogenase, however, was only observed after incubation of cells in a microaerobic environment. Hydrogen evolution could not be detected under aerobic conditions, but upon transfer of cells to dark anaerobic conditions, large amounts of hydrogen were immediately produced. This hydrogen evolution was sensitive to light and oxygen but not to inhibitors of protein synthesis. The enzyme activity catalyzing the formation of hydrogen was not membrane-bound; some functional properties were characterized in cell-free extracts.     

Zum Sauerstoffverbrauch von Myzus persicae (Sulz.) vor und nach Aufnahme des Blattrollvirus

Zusammenfassung Der Sauerstoffverbrauch virusfreier Myzus persicae (Sulz.) wird mit demjenigen blattrollvirusinfizierter Läuse verglichen. Der O₂-Verbrauch ist bei infizierten Tieren um rund 30% gegenüber virusfreien Kontrolltieren erniedrigt. Auf verschiedenen. Wirtspflanzen gehaltene Läuse zeigen keinen signifikanten Unterschied in ihrer Atmungsintensität. Die grö\te Erniedrigung des O₂-Bedarfs ist etwa 30 Stunden nach Ende des Infektionssaugens (d.h 38 Stunden nach Beginn der Nahrungsaufnahme) erreicht und steigt dann im Verlauf der folgenden 50 Stunden nicht weiter an. Der Stoffwechsel der Läuse wird offensichtlich durch die Aufnahme des Blattrollvirus gestört.

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Summary The intensity of respiration of virus-free aphids was compared with that of the same insects infected with potato leafroll virus. The former showed an average oxygen-consumption of 3.018 cm³/gm/hour, and the latter 1.992 cm³/gm/hour; which indicates a reduction of 33.9% in the oxygen-uptake in the infected animals. This reduction is associated with the infection and the multiplication of the virus in the insect. The oxygen-consumption was the same before the beginning and at the end of the infective suction period, falling afterwards over a period of 30 hours by about 30% of the first reading, and then remaining almost constant. This indicates a correlation between this variation in the oxygen-consumption and the multiplication of the virus in the aphid.