The control of lysine biosynthesis in maize

Aspartate kinase has been partially purified and characterised from germinating maize seedlings. The K_m for aspartate was 9 mM. Out of several amino acids which are potential feedback regulators of the enzymes, only lysine is markedly inhibitory, having a K_i of 13 μM and causing 100% inhibition at 0.5 mM. Lysine also protects the enzyme against heat inactivation. Dihydrodipicolinic acid synthase isolated from the same tissue is also inhibited by lysine, 1 mM causing 95% inhibition.     

Anchored plasticity opens doors for selective inhibitor design in nitric oxide synthase

Nitric oxide synthase (NOS) enzymes synthesize nitric oxide, a signal for vasodilatation and neurotransmission at low concentrations and a defensive cytotoxin at higher concentrations. The high active site conservation among all three NOS isozymes hinders the design of selective NOS inhibitors to treat inflammation, arthritis, stroke, septic shock and cancer. Our crystal structures and mutagenesis results identified an isozyme-specific induced-fit binding mode linking a cascade of conformational changes to a new specificity pocket. Plasticity of an isozyme-specific triad of distant second- and third-shell residues modulates conformational changes of invariant first-shell residues to determine inhibitor selectivity. To design potent and selective NOS inhibitors, we developed the anchored plasticity approach: anchor an inhibitor core in a conserved binding pocket, then extend rigid bulky substituents toward remote specificity pockets, which become accessible upon conformational changes of flexible residues. This approach exemplifies general principles for the design of selective enzyme inhibitors that overcome strong active site conservation.     

Radiocaesium in an organic soil and the effect of treatment with the fungicide ‘Captan’

Soil fungi accumulate radiocaesium from contaminated soil and it has been hypothesised that this may alter the plant availability and movement of the radionuclide in soil. The effect of twice-monthly addition of an aqueous suspension of the fungicide ‘Captan’ on the changes in a peaty podzol soil at 2 sites, contaminated 2 or 3 years earlier by the injection of ¹³⁴Cs, has been quantified. The sites had different soil acidity and vegetation cover. The less acid soil (pH_water 5.0) had been improved by the addition of lime and fertilizer and was reseeded with grass and clover. The more acid soil (pH_water 3.8) was under hill grasses, herbs and heather. On both sites the addition of fungicide did not alter the amount or concentration of radiocaesium in plant material sampled monthly or the depth distribution of radiocaesium in the soil profile. The concentration of the fungal constituent, ergosterol, in the soil, measured monthly, was unaffected by the fungicide treatment but evidence was obtained from a pot experiment to show that ergosterol decomposes slowly in cold, wet soils. On the more acid soil, two weeks after the last application of fungicide, there was a decline in active fungi as measured by fluorescein diacetate staining. Chloroform fumigation of the more acid soil resulted in a small increase in the amount of ¹³⁴Cs exchangeable with 1 M ammonium acetate. Radiocaesium in seven different fungi grown in pure culture was found to be almost entirely extractable (> 95%) with 1 M ammonium acetate. Another, Amanita rubescens, showed some retention and 88% was extractable. These findings do not preclude the fungal biomass as an important soil component controlling plant availability of radiocaesium from acid, organic soils by maintaining radiocaesium in a biological cycle, but make it unlikely that any fixation by fungi in a chemical sense is involved.     

Influence of soil type,crop and air drying on residual carbohydrate content and aggregate stability after treatment with periodate and tetraborate

Summary The relationship between the water stability of microaggregates and the residual carbohydrate content of soil was examined in 15 soils from 7 soil series under various cultivations. The carbohydrate was progressively removed by increasing the time of treatment with 0.02M periodate and 0.1M tetraborate. The resulting decrease in reducing sugar content was significantly correlated with an increased disruption of microaggregates (>45 m) as determined by a turbidimetric method. The most effective treatment removed about 80% of the soil carbohydrate and caused an increase of about 75% in the fraction of microaggregates (<45 m) compared to untreated soil.15–20 percent of the soil carbohydrate was resistant to oxidation by periodate, even after prolonged reaction times and contained a higher relative proportion of glucose, arabinose, and xylose than the oxidised material. Sugars typical of microbial sources, mannose, galactose, rhamnose and fucose, were therefore preferentially oxidised by the periodate treatment.The grassland soils generally had higher carbohydrate contents than the arable soils and initially had a greater degree of aggregation. However, periodate oxidation affected each soil in its own characteristic manner. A significant inverse linear relationship between the degree of disruption and the residual sugar content was found with 13 of the 15 soils. Over the range measured aggregate stability was therefore related to the presence of carbohydrate predominantly from microbial sources.