Induced Production of Acidic Polysaccharide by Benzalkonium Chloride-resistant Bacterium (Enterobacter species) in the Presence of Hexachlorophen and Chlorhexidine

The bacterium, which was isolated from soil and identified as Enterobacter sp., was induced by hexachlorophen (HCP) and chlorhexidine (CH), as well as benzalkonium chloride (BC), to produce acidic polysaccharide. HCP is a bisphenol and CH is a bisbiguanido, while BC is a quarternary ammonium compound. The cells produced the maximum amount of the polysaccharide (0.3 ~ 0.9 mg as total sugar/mg dry weight cells) in a 0.07m potassium phosphate buffer (pH 7.2) containing 0.22 m glucose and approximately 0.1 mm BC or HCP, or 0.06 mm CH. There was no growth of the cells in these conditions. The polysaccharides produced in the presence of each drug were all composed of fucose, glucose, galactose and glucuronic acid. At the optimum concentration for polysaccharide production, a large amount of UV-absorbing material was released from the cells.     

Substrate Specificity,Mode of Action,and of Inhibition by Organic Acids of Purified Acetylesterase from Sclerotinia Fungus

Acetylesterase (AcE) of Sclerotinia libertiana was purified approximately 1170-fold, and proved homogeneous by electrophoresis, ultracentrifugation and chromatography. The purified AcE hydrolyzed various acetyl esters in the following order; vinyl acetate, tri-acetin, n-butyl acetate, p-nitrophenylacetate, diacetin, ethylene glycol diacetate, monoacetin, ethyl acetate, acetylcholine, methyl acetate. It also had apparently a slight activity on tannic acid, benzoylcholine, methyl butyrate and acetic anhydride.

The mode of AcE reaction on these substrates could be divided into two types of group by Lineweaver-Burk plot, one forms the enzyme-substrate complex, ES, and the other, SES additionally combining substrate at a high substrate concentration.

From the inhibition experiment by organic acids, it was suggested that the neighbouring carboxyl groups of the di-, or tribasic acid such as citric, cis-aconitic, succinic, and maleic acid have a significance on inhibition of the AcE. Also, choline esterase inhibitor partially inhibited the activity on acetylcholine, and bivalent metal ion increased the activity on triacetin. Thus, the AcE was supposed to have a many adjacent sites of interaction with the substrate.     

Non-lethal method of DNA sampling in euglossine bees supported by mark–recapture experiments and microsatellite genotyping

Non-lethal sampling methods are of great interest for conservation genetic studies to prevent the death of individuals in populations that are threatened or in decline. With this aim, we tested a non-lethal method of partial antennae removal for DNA sampling in two euglossine bee species: Euglossa cordata and Eulaema nigrita. We validated the survival of the individuals through mark–recapture experiments during 16 months. The quality and quantity of the tissue for DNA analysis was verified through amplification and genotyping of nine and eleven microsatellite loci, respectively. Our results from the mark–recapture experiments showed equal recapture rates of individuals with intact and removed antennae (E. cordata χ² = 2.492, df = 1, p = 0.114; E. nigrita χ² = 1.683, df = 1, p = 0.194). Microsatellite loci were successfully genotyped in 97.1 and 97.6 % of the E. cordata and E. nigrita individuals, respectively. Our results validate the feasibility of using antennae tissue for DNA genetic analysis without compromising the survival of individual bees.     

Characterization of the human gastric fluid proteome reveals distinct pH-dependent protein profiles: implications for biomarker studies

Gastric fluid is a source of gastric cancer biomarkers. However, very little is known about the normal gastric fluid proteome and its biological variations. In this study, we performed a comprehensive analysis of the human gastric fluid proteome using samples obtained from individuals with benign gastric conditions. Gastric fluid proteins were prefractionated using ultracentrifuge filters (3 kDa cutoff) and analyzed by two-dimensional gel electrophoresis (2-DE) and multidimensional LC-MS/MS. Our 2-DE analysis of 170 gastric fluid samples revealed distinct protein profiles for acidic and neutral samples, highlighting pH effects on protein composition. By 2D LC-MS/MS analysis of pooled samples, we identified 284 and 347 proteins in acidic and neutral samples respectively (FDR ≤1%), of which 265 proteins (72.4%) overlapped. However, unlike neutral samples, most proteins in acidic samples were identified from peptides in the filtrate (i.e., <3 kDa). Consistent with this finding, immunoblot analysis of six potential gastric cancer biomarkers rarely detected full-length proteins in acidic samples. These findings have important implications for biomarker studies because a majority of gastric cancer patients have neutral gastric fluid compared to noncancer controls. Consequently, sample stratification, choice of proteomic approaches, and validation strategy can profoundly affect the interpretation of biomarker findings. These observations should help to refine gastric fluid biomarker studies.     

The role of alpha-synuclein oligomerization and aggregation in cellular and animal models of Parkinson's disease

α-Synuclein (α-syn) is a synaptic protein in which four mutations (A53T, A30P, E46K and gene triplication) have been found to cause an autosomal dominant form of Parkinson's disease (PD). It is also the major component of intraneuronal protein aggregates, designated as Lewy bodies (LBs), a prominent pathological hallmark of PD. How α-syn contributes to LB formation and PD is still not well-understood. It has been proposed that aggregation of α-syn contributes to the formation of LBs, which then leads to neurodegeneration in PD. However, studies have also suggested that aggregates formation is a protective mechanism against more toxic α-syn oligomers. In this study, we have generated α-syn mutants that have increased propensity to form aggregates by attaching a CL1 peptide to the C-terminal of α-syn. Data from our cellular study suggest an inverse correlation between cell viability and the amount of α-syn aggregates formed in the cells. In addition, our animal model of PD indicates that attachment of CL1 to α-syn enhanced its toxicity to dopaminergic neurons in an age-dependent manner and induced the formation of Lewy body-like α-syn aggregates in the substantia nigra. These results provide new insights into how α-syn-induced toxicity is related to its aggregation.     

Determination of effector molecules in L-arabinose-induced bulge formation and lysis of Escherichia coli IFO 3545

L-Ribulose 5-phosphate (L-Ru5P) was identified as the primary effector molecule of L-arabinose-induced bulge formation in Escherichia coli IFO 3545 observed in nutrient broth with 5% (w/v) sodium chloride. Hyperinduction of L-arabinose isomerase was due to exogenous sodium chloride and the resulting alteration in the balance of the L-arabinose-metabolizing enzymes resulted in accumulation of L-Ru5P. L-Ru5P induced the lysis of an L-arabinose-negative, L-Ru5P 4-epimerase-less mutant, ara-207, even when directly added to the medium but was not active against the wild-type strain. Some L-arabinose-utilizing (L-arabinose-resistant) revertants of ara-207 were still sensitive to L-Ru5P, indicating the involvement of another mutation in L-Ru5P-sensitivity other than genetic lack of L-Ru5P 4-epimerase. Among the various pentose phosphate esters tested, only L-Ru5P could induce lysis of ara-207. The lytic activity of L-Ru5P was attributed to its effect on bacterial sugar nucleotide metabolism which caused secondary accumulation of uridine 5'-diphosphate galactose (UDPGal), which provoked lysis induction.     

Comparison of rat and rat-mouse chimeric anti-murine CD4 antibodies in vitro. Chimeric antibodies lyse low-density CD4+ cells

GK1.5, a rat anti-mouse CD4 mAb, is effective in the treatment of several autoimmune syndromes, induces tolerance to co-administered Ag, and prolongs allograft survival. We have constructed a family of molecules with GK1.5 V regions and mouse gamma 1, gamma 2a, gamma 2b, or gamma 3 constant regions to investigate the mechanisms underlying the effectiveness of GK1.5. The rat-mouse chimeric antibodies are specific for murine CD4 and have identical binding curves as rat GK1.5 on CD4+ T cells. The chimeric GK1.5 gamma 2a, GK1.5 gamma 2b, and GK1.5 gamma 3 antibodies are more efficient than rat GK1.5 at C-mediated cytotoxicity. This is attributed to the enhanced capacity of the chimeric antibodies, compared to rat GK1.5, to lyse CD4+ cells with a low cell surface Ag density. This observation may have important implications for therapy.