Ryanoids and imperatoxin affect the modulation of cardiac ryanodine receptors by dihydropyridine receptor Peptide A

Ca²⁺-entry via L-type Ca²⁺ channels (DHPR) is known to trigger ryanodine receptor (RyR)-mediated Ca²⁺-release from sarcoplasmic reticulum (SR). The mechanism that terminates SR Ca²⁺ release is still unknown. Previous reports showed evidence of Ca²⁺-entry independent inhibition of Ca²⁺ sparks by DHPR in cardiomyocytes. A peptide from the DHPR loop II-III (PepA) was reported to modulate isolated RyRs. We found that PepA induced voltage-dependent “flicker block” and transition to substates of fully-activated cardiac RyRs in planar bilayers. Substates had less voltage-dependence than block and did not represent occupancy of a ryanoid site. However, ryanoids stabilized PepA-induced events while PepA increased RyR2 affinity for ryanodol, which suggests cooperative interactions. Ryanodol stabilized Imperatoxin A (IpTx_A) binding but when IpTx_A bound first, it prevented ryanodol binding. Moreover, IpTx_A and PepA excluded each other from their sites. This suggests that IpTx_A generates a vestibular gate (either sterically or allosterically) that prevents access to the peptides and ryanodol binding sites. Inactivating gate moieties (“ball peptides”) from K⁺ and Na⁺ channels (ShakerB and KIFMK, respectively) induced well resolved slow block and substates, which were sensitive to ryanoids and IpTx_A and allowed, by comparison, better understanding of PepA action. The RyR2 appears to interact with PepA or ball peptides through a two-step mechanism, reminiscent of the inactivation of voltage-gated channels, which includes binding to outer (substates) and inner (block) vestibular regions in the channel conduction pathway. Our results open the possibility that “ball peptide-like” moieties in RyR2-interacting proteins could modulate SR Ca²⁺ release in cells.     

Long-term dynamics in rock pool Daphnia metapopulations

Metapopulations of Daphnia longispina , D. magna and D. pulex on 16 islands containing 507 rock pools were studied over 17 yr (autumns 1982–1998). Two yearly samples were taken representing early and late summer conditions. A local extinction was assumed when a species was absent from a pool for more than one year. Average yearly extinction rates, calculated from probability of survival in age grouped data, were close to 20%, and number of extinctions was on average balanced by the number of colonizations. Extinction rates during the first year following colonization were 45–50% in all species, but later decreased to low values. In first-year data, single species populations of D. magna had lower extinction rates than in multi-species pools. In later years all species combinations had similar extinction rates. The average proportion of rock pools occupied by D. longispina in any given year was 0.178, by D. magna 0.169 and by D. pulex 0.056. In 22% of cases, coexistence was observed. 71% of the pools were colonized at least once. The distribution of shortest colonization distances was left-skewed, and median distances (7–8 m) were same in all species. The distribution of colonizations mostly corresponded to the expected frequencies calculated as the product of frequencies of source and target pools. Both D. longispina and D. magna colonized pools already occupied with a somewhat higher probability than empty pools. Probably owing to variation of habitat quality, Daphnia populations in some rock pools appear to be less prone to extinction, providing sources of dispersal to patches with higher extinction risk. The system appears to be at an approximate equilibrium, with several characteristics close to classical metapopulation system.     

Metabolic Consequences of Inhibition of Cerebral Adenosylmethionine Decarboxylase by Methylglyoxal bis(Guanylhydrazone)

Abstract: Effects of intracerebroventricularly injected methylglyoxal bis(guanylhydrazone) on polyamine metabolism in mouse brain were recorded during 180 h after a single dose of 3.4 μmol/kg body weight. Cerebral concentrations of 31 other amino compounds were also asayed during the experiment. The drug caused a significant inhibition of adenosylmethionine decarboxylase that lasted for 50 h, with the maximal decrease, about 70%, occurring between 5 and 10 h after injection. Significant decreases of brain spermidine and spermine concentrations were observed in three phases. Two transient decreases occurred at 10 and at 35 h, and a longer-lasting one between 60 and 100 h. Ornithine decarboxylase was stimulated within 5 h after the injection, reaching a maximal level about 30-fold above normal at 60 h, and returned to control level at 140 h. This stimulation was accompanied by significant accumulation of the reaction product, putrescine, in the brain. It was maximally > 10-fold above normal at 160 h, and was still significantly above control at the end of the observation period. The time course of changes in the parameters of polyamine metabolism was regarded as support of a previously presented hypothesis that limiting putrescine concentration may play a role in the regulation of cerebral polyamine metabolism. In addition, the present results emphasize the possibility that changes in the activities of catabolic reactions may also contribute to the regulation of cerebral polyamine concentrations. Of the 31 amino compounds analyzed, only the concentrations of ornithine, urea, glutamine, and glutamate showed significant changes from normal. Ornithine concentration first was significantly increased at 25 h, whereafter it decreased and was somewhat below normal for most of the period between 60 and 180 h. The urea concentration showed a tendency to increase throughout the experiment, being significantly elevated at the end. These changes were regarded as suggesting that the increased need for ornithine in putrescine synthesis is satisfied mainly by increased arginine uptake and degradation. The magnitude of urea accumulation suggested that metabolism of ornithine to glutamate was also accelerated. An unexpected shift toward glutamine in the glutamine/glutamate relationship was observed during the first 100 h. However, the total concentration of these two compounds was quite constant throughout the experiment. Inhibition of ornithine decarboxylase by intraventricular injection of 2-difluoromethylornithine was tried during the study, but sufficient doses could not be used without induction of acute side effects.     

Possible Involvement of Humoral Regulation in the Effects of Elevated Cerebral 4-Aminobutyric Acid Levels on the Polyamine Metabolism in Brain

Abstract: It has been reported in several recent studies that the manipulation of cerebral 4-aminobutyric acid (GABA) level results in unexpected changes in the cerebral polyamine metabolism in vivo . The mechanisms behind these interactions have remained unknown. The present results show that the changes in polyamine metabolism are not limited to the brain, but are observable also in the liver, which served as a peripheral reference tissue. Different types of responses in the activities of the poiyamine-synthesizing enzymes, ornithine decarboxylase and adenosylmethionine decarboxylase, were observed after increasing the cerebral GABA concentration of mice with varying doses of two GABA transaminase inhibitors, gabaculine and ethanolamine- O- sulphate. The time course of the significant changes in the enzyme activities showed significant correlation between the brain and liver. The possibility of direct effects of the drugs on liver was excluded by injecting them intracerebroventricularly, and by performing control experiments with equal doses given peripherally. It is concluded that the observed changes in the polyamine metabolism of liver are produced through centrally mediated humoral regulation, and that the corresponding changes in the brain are obviously due to the same factor or factors, since they are significantly correlated to the changes in liver.     

Ambient temperature dependence of the body temperature and of the duration of the hibernation periods in the garden dormouse, Eliomys quercinus L.

Hibernation pattern in the garden dormouse (Eliomys quercinus) was studied at TA's of 0, 4, 6.5, and 9 degrees C during 6 months in each study winter. The animals were kept in darkness without food or water. Body temperature and the mean duration of the hibernation periods were ambient temperature dependent. The comparison of hibernation at different TA's was based on three features: the mean duration of the hibernation periods during the midwinter plateau, the existence of the initial and terminal phases with the changing length of the hibernation periods, and the differences between the sexes. The TA of 4 degrees C was the optimal TA for long-term hibernation. The difference between 4 degrees C and other TA's was greater in males. The TA's of 0 and 9 degrees C were near the lower and higher TA limits for long-term hibernation. Signs of the existence of a circannual rhythm were detected in the males toward the end of the hibernation season.     

Immunochemical analysis of the N-acetyl hexosaminidases in human-mouse hybrids made using a double selective system.

A human-mouse hybrid, DUR 4 (Solomon et al., 1976), containing a human X/15 translocation chromosome and also chromosome 5, among other human chromosomes, was used in a double selection system to obtain hybrids of four different types: X/15+ 5+, X/15- 5+, X/15+, 5-. Standard positive and negative selection systems were used for the X chromosome, and negative selection for chromosome 5 was done with diphtheria toxin. The assignment of HEXB and presently only when both the X/15 chromosome and chromosome 5 were present. A "HEXA-like" band segregated with chromosome 15 (or X/15) but independently of chromosome 5. This component, unlike HEXA, does not contain human HEXbeta antigen.     

Regional assignment of the human gene coding for a multifunctional polypeptide (P4HB) acting as the beta-subunit of prolyl 4-hydroxylase and the enzyme protein disulfide isomerase to 17q25.

Prolyl 4-hydroxylase, an alpha 2 beta 2 tetramer, catalyzes the formation of 4-hydroxyproline in collagens and related proteins by hydroxylating proline residues in peptide linkages. The beta-subunit of prolyl 4-hydroxylase (P4HB) is a highly unusual multifunctional polypeptide that is identical to the enzyme protein disulfide isomerase and a major cellular thyroid hormone-binding protein and is highly similar to a glycosylation site-binding polypeptide of oligosaccharyl transferase. We report here the regional assignment of the gene for this multifunctional polypeptide. In situ hybridization mapped the gene to 17q25. Southern blot analyses of restricted DNA from a chromosome-mediated gene transfer transfectant panel suggested that the P4HB gene is located distal to the gene for thymidine kinase, either between the genes for thymidine kinase and galactokinase or on the telomeric side of both these genes.     

A novel allele of the P-starvation tolerance gene OsPSTOL1 from African rice (Oryza glaberrima Steud) and its distribution in the genus Oryza

Key message

We have developed allele-specific markers for molecular breeding to transfer the PSTOL1 gene from Kasalath to African mega-varieties, including NERICAs, to improve their tolerance to P-deficient soil.

Abstract

The deficiency of phosphorus (P) in soil is a major problem in Sub-Saharan Africa due to general nutrient depletion and the presence of P-fixing soils. Developing rice cultivars with enhanced P efficiency would, therefore, represent a sustainable strategy to improve the livelihood of resource-poor farmers. Recently the Pup1 locus, a major QTL for tolerance to P deficiency in soil, was successfully narrowed-down to a major gene, the protein kinase OsPSTOL1 (P-starvation tolerance), which was found to be generally absent from modern irrigated rice varieties. Our target is to improve the tolerance of African mega-varieties to P deficiency through marker-assisted introgression of PSTOL1. As a first step, we have determined the Pup1 haplotype and surveyed the presence or absence of PSTOL1 and other genes of the Pup1 locus in African mega-varieties, NERICAs (New Rice for Africa) and their Oryza glaberrima parents. Here, we report the presence of a novel PSTOL1 allele in upland NERICAs that was inherited from the O. glaberrima parent CG14. This allele showed a 35 base-pair substitution when aligned to the Kasalath allele, but maintained a fully conserved kinase domain, and is present in most O. glaberrima accessions evaluated. In-silico and marker analysis indicated that many other genes of the Kasalath Pup1 locus were missing in the O. glaberrima genome, including the dirigent-like gene OsPupK20-2, which was shown to be downstream of PSTOL1. We have developed several allele-specific markers for the use for molecular breeding to transfer the PSTOL1 gene from Kasalath to African mega-varieties, including NERICAs.