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71.
72.
Wei-Ping Yu Kenneth Yew Vikneswari Rajasegaran Byrappa Venkatesh 《BMC evolutionary biology》2007,7(1):49
Background
The synaptic cell adhesion molecules, protocadherins, are a vertebrate innovation that accompanied the emergence of the neural tube and the elaborate central nervous system. In mammals, the protocadherins are encoded by three closely-linked clusters (α, β and γ) of tandem genes and are hypothesized to provide a molecular code for specifying the remarkably-diverse neural connections in the central nervous system. Like mammals, the coelacanth, a lobe-finned fish, contains a single protocadherin locus, also arranged into α, β and γ clusters. Zebrafish, however, possesses two protocadherin loci that contain more than twice the number of genes as the coelacanth, but arranged only into α and γ clusters. To gain further insight into the evolutionary history of protocadherin clusters, we have sequenced and analyzed protocadherin clusters from the compact genome of the pufferfish, Fugu rubripes. 相似文献73.
74.
Wayne I. L. Davies Boon-Hui Tay Lei Zheng Janine A. Danks Sydney Brenner Russell G. Foster Shaun P. Collin Mark W. Hankins Byrappa Venkatesh David M. Hunt 《PloS one》2012,7(12)
Non-visual photoreception in mammals is primarily mediated by two splice variants that derive from a single melanopsin (OPN4M) gene, whose expression is restricted to a subset of retinal ganglion cells. Physiologically, this sensory system regulates the photoentrainment of many biological rhythms, such as sleep via the melatonin endocrine system and pupil constriction. By contrast, melanopsin exists as two distinct lineages in non-mammals, opn4m and opn4x, and is broadly expressed in a wide range of tissue types, including the eye, brain, pineal gland and skin. Despite these findings, the evolution and function of melanopsin in early vertebrates are largely unknown. We, therefore, investigated the complement of opn4 classes present in the genome of a model deep-sea cartilaginous species, the elephant shark (Callorhinchus milii), as a representative vertebrate that resides at the base of the gnathostome (jawed vertebrate) lineage. We reveal that three melanopsin genes, opn4m1, opn4m2 and opn4x, are expressed in multiple tissues of the elephant shark. The two opn4m genes are likely to have arisen as a result of a lineage-specific duplication, whereas “long” and “short” splice variants are generated from a single opn4x gene. By using a heterologous expression system, we suggest that these genes encode functional photopigments that exhibit both “invertebrate-like” bistable and classical “vertebrate-like” monostable biochemical characteristics. We discuss the evolution and function of these melanopsin pigments within the context of the diverse photic and ecological environments inhabited by this chimaerid holocephalan, as well as the origin of non-visual sensory systems in early vertebrates. 相似文献
75.
Ramme AJ Shivanna KH Criswell AJ Kallemeyn NA Magnotta VA Grosland NM 《Computer methods in biomechanics and biomedical engineering》2012,15(10):1043-1052
Finite element (FE) analysis is a cornerstone of orthopaedic biomechanics research. Three-dimensional medical imaging provides sufficient resolution for the subject-specific FE models to be generated from these data-sets. FE model development requires discretisation of a three-dimensional domain, which can be the most time-consuming component of a FE study. Hexahedral meshing tools based on the multiblock method currently rely on the manual placement of building blocks for mesh generation. We hypothesise that angular analysis of the geometric centreline for a three-dimensional surface could be used to automatically generate building block structures for the multiblock hexahedral mesh generation. Our algorithm uses a set of user-defined points and parameters to automatically generate a multiblock structure based on a surface's geometric centreline. This significantly reduces the time required for model development. We have applied this algorithm to 47 bones of varying geometries and successfully generated a FE mesh in all cases. This work represents significant advancement in automatically generating multiblock structures for a wide range of geometries. 相似文献
76.
The genomes of several vertebrates, including six mammals, the chicken, Xenopus and four ray-finned fishes have been sequenced or are currently being sequenced to provide a better understanding of the human genome through comparative analysis. However, this list does not include cartilaginous fishes, which are the most basal living jawed vertebrates [1]. The genomes of the current ‘popular’ cartilaginous fishes such as the nurse shark, dogfish, and horn shark are larger than the human genome (∼3800 Mb to 7000 Mb) [2], and are not attractive for whole-genome sequencing. Here, we report the characterization of the relatively small genome (1200 Mb) of a cartilaginous fish, the elephant fish (Callorhinchus milii), and propose it as a model for whole-genome sequencing. 相似文献
77.
Although mutualism between ants and flowering plants is wide spread, ant pollination has not evolved as a major pollination syndrome. So far ant pollination has been reported largely in herbaceous species, growing in warm and dry habitats. While studying pollination ecology of Syzygium species (Myrtaceae), growing in tropical forests of the Western Ghats, India, we observed one of the ant species, Technomyrmex albipes, to be the dominant floral visitor in S. occidentale (Bourd.) Chithra among a range of other insect (species of Xylocopa and Trigona, and Apis cerana) and bird visitors. We studied the role of ant species in pollination when compared to other floral visitors. The fruit set in flowers exclusively visited by T. albipes was significantly higher than those visited by any other visitor. The day and night exclusive pollination experiments allowing only T. albipes indicated diel pollination by T. albipes, which was the only active flower visitor during the night. The breeding system of the species was studied through controlled pollinations. The species is partially self-compatible and exhibits considerable autogamy. 相似文献
78.
The role of the pistil in screening compatible pollen 总被引:2,自引:0,他引:2
Malti Shivanna K. R. 《TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik》1985,70(6):684-686
Summary Results of in vitro studies on pollen germination and tube growth in the presence of leachates from bisected pistils in Crotalaria retusa provide evidence for the operation of selection pressure during pollen-pistil interaction — a process which stimulates growth
of a limited number of pollen tubes giving them an advantage over others in effecting fertilization. 相似文献
79.
Pollen viability and pollen vigor 总被引:3,自引:0,他引:3
K. R. Shivanna H. F. Linskens M. Cresti 《TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik》1991,81(1):38-42
Summary Investigations were carried out to correlate pollen viability, assessed on the basis of a fluorochromatic reaction (FCR) test, with pollen vigor, assessed on the basis of the time taken for in vitro germination in pollen grains subjected to high humidity (>95% RH) and temperature (38 °C) or storage stress of Nicotiana tabacum, Agave sp., Tradescantia virginiana, and Iris sp. Both high RH and temperature, as well as storage stresses, affected pollen vigor before affecting pollen viability. The results are discussed in the light of available data on the viability and vigor of stressed pollen and of aged seeds. The need for consideration of pollen vigor, particularly in stored pollen, the inadequacy of the methods presently used, and some of the methods suitable to assess pollen vigor are elaborated. 相似文献
80.
Summary Responses of pollen grains of Nicotiana tabacum to high humidity (95% RH, 4 h) and temperature (38°/45° C, 4 h) stresses were investigated. Pollen grains were subjected to only RH or only temperature, or to both of these stresses. Their viability was assessed on the basis of the fluorochromatic reaction (FCR) test, and vigour was assessed on the basis of the time taken for in vitro germination as well as on the emergence of pollen tubes through the cut end of semi-vivo implanted styles. None of the stress conditions affected pollen viability and high RH or high temperature stress did not individually affect pollen vigour. However, pollen vigour was markedly affected when both the stresses were given together. Pollen grains subjected to high RH at 38° C took a longer time to germinate in vitro and the pollen tubes emerged later from the cut end of the semi-vivo styles; division of the generative cell was also delayed. Pollen grains subjected to high RH at 45° C failed to germinate in vitro, but did germinate on the stigma. Many pollen tubes subjected to this treatment showed abnormalities, and the growth of pollen tubes in the pistil was much slower than that observed in other treatments. Pollen samples subjected to all of the stress conditions were able to induce fruit and seed set. The implications of these results on the relationship between the FCR test and viability, and between viability and vigour, especially in stressed pollen, are discussed. 相似文献