The Presynaptic Cytomatrix Protein Bassoon: Sequence and Chromosomal Localization of the HumanBSNGene

Bassoon is a novel 420-kDa protein recently identified as a component of the cytoskeleton at presynaptic neurotransmitter release sites. Analysis of the rat and mouse sequences revealed a polyglutamine stretch in the C-terminal part of the protein. Since it is known for some proteins that abnormal amplification of such polyglutamine regions can cause late-onset neurodegeneration, we cloned and localized the human BASSOON gene (BSN). Phage clones spanning most of the open reading frame and the 3′ untranslated region were isolated from a human genomic library and used for chromosomal localization ofBSNto chromosome 3p21 by FISH. The localization was confirmed by PCR on rodent/human somatic cell hybrids; it is consistent with the localization of the murineBsngene at chromosome 9F. Sequencing revealed a polyglutamine stretch of only five residues in human, and PCR amplifications from 50 individuals showed no obvious length polymorphism in this region. Analysis of the primary structure of Bassoon and comparison to previous database entries provide evidence for a newly emerging protein family.     

Lipid composition of somatic and zygotic embryos from Prunus avium. Effect of a cold treatment on somatic embryo quality

In order to evaluate the quality of Prunus avium somatic embryos, a comparison of lipid composition between somatic and zygotic embryos was undertaken. In both zygotic and somatic embryos, neutral glycerolipids (NL) and phosphatidylcholine (PC) were the 2 major lipid classes. The content of NL increased over the course of development in zygotic embryos and reached 490 μg per embryo, while the PC content reached 100 μg per embryo. However, the contents of NL and PC in somatic embryos were similar to immature zygotic embryos at stage 3. Fatty acid composition of NL from both zygotic and somatic embryos revealed more unsaturated than saturated fatty acids. In somatic embryos, the saturated/unsaturated fatty acid ratios of NL and phosphatidylinositol (PI) were similar to those observed in immature zygotic embryos up to stage 6. Conversely, in phosphatidylethanolamine (PE) the ratio was similar to the ratio observed in mature zygotic embryos, at stage 7. Histological studies confirmed the immaturity of somatic embryos: no protein or lipid reserves were observed in the vacuolated cotyledonary cells. Maturation of somatic embryos was improved by a 2-month cold period. In cold-treated somatic embryos, both NL and PC increased to levels comparable to those observed in mature zygotic embryos, and the PE content reached 10 times the level of that in mature zygotic embryos. The cold treatment induced a large increase in the saturated/unsaturated fatty acid ratio in phospholipids but only a slight increase in that of neutral glycerolipids. Histological studies revealed a lipid accumulation at cellular level. Lipid bodies surrounded by protein bodies were observed in cotyledonary cells of cold-treated somatic embryos. Furthermore, the cold-treated somatic embryos developed into plantlets with a frequency of 14%, whereas no development was obtained with the non-treated somatic embryos.     

Computational study,synthesis and evaluation of active peptides derived from Parasporin-2 and spike protein from Alphacoronavirus against colorectal cancer cells

Parasporin-2Aa1 (PS2Aa1) is a toxic protein of 37 KDa (30 kDa, activated form produced by proteolysis) that was shown to be cytotoxic against specific human cancer cells, although its mechanism of action has not been elucidated yet. In order to study the role of some native peptide fragments of proteins on anticancer activity, here we investigated the cytotoxic effect of peptide fragments from domain-1 of PS2Aa1 and one of the loops present in the binding region of the virus spike protein from Alphacoronavirus (HCoV-229E), the latter according to scientific reports, who showed interaction with the human APN (h-APN) receptor, evidence corroborated through computational simulations, and thus being possible active against colon cancer cells. Peptides namely P264-G274, Loop1-PS2Aa, and Loop2-PS2Aa were synthesized using the Fmoc solid-phase synthesis and characterized by mass spectrometry (MS). Additionally, one region from loop 1 of HCoV-229E, Loop1-HCoV-229E, was also synthesized and characterized. The A4W-GGN5 anticancer peptide and 5-fluorouracil (5-FU) were taken as a control in all experiments. Circular dichroism revealed an α-helix structure for the peptides derived from PS2Aa1 (P264-G274, Loop1-PS2Aa, and Loop2-PS2Aa) and β-laminar structure for the peptide derived from Alphacoronavirus spike protein Loop1-HCoV-229E. Peptides showed a hemolysis percentage of less than 20% at 100 µM concentration. Besides, peptides exhibited stronger anticancer activity against SW480 and SW620 cells after exposure for 48 h. Likewise, these compounds showed significantly lower toxicity against normal cells CHO-K1. The results suggest that native peptide fragments from Ps2Aa1 may be optimized as a novel potential cancer-therapeutic agents.     

Development of bovine embryos in single in vitro production (sIVP) systems

Single in vitro production (sIVP) of embryos enables the study of developmental parameters of individual oocytes or embryos. Because several previously published sIVP systems showed varying levels of success, we attempted to design a simple, semidefined sIVP system that resulted in developmental rates similar to those obtained through group production (gIVP). In a 5 × 3 × 4 factorial experiment, 4200 oocytes were randomly assigned to combinations of various maturation (sIVM), fertilization (sIVF), and culture (sIVC) treatments based on media TCM199 (5 treatments), TALP (3 treatments), and SOF/aa/BSA (4 treatments), respectively. All sIVP steps were carried out in 10–12 μl drops under oil. Embryo development to blastocyst on days 7 and 8 of culture was determined and blastocyst cell numbers measured as an indicator of embryo quality. No interaction was found within any combination of sIVM, sIVF and sIVC treatments. Also, there was no difference in percentage of development to various stages for embryos in any of the sIVM or sIVF treatments (over all treatment combinations). However, when treatment combinations included charcoal-treated serum addition on day 5 of culture, a significant increase in development (39.0% total blastocysts/total oocytes vs. 22.7, 23.8 and 23.5% for the other 3 sIVC treatments, respectively; P < 0.001) and decrease in mean cell number (114.2 vs. 149.1, 150.5 and 143.7 cells, respectively; P < 0.001) was observed. These results are comparable to those routinely obtained in this laboratory with gIVP and establish standard conditions for individual embryo production. Mol. Reprod. Dev. 51:143–147, 1998. © 1998 Wiley-Liss, Inc.     

Monosaccharide and aminoacid composition of mucilage material produced from a mixture of four phytoplanktonic taxa

A series of multi-taxa cultures containing five blue-green algae, three diatoms, one prymnesiophyte and one dinoflagellate was set up by using as inoculum sea water collected during a mucus-forming phytoplankton bloom in Euboikos Gulf, Aegean Sea. The cultured algae produced mucilage material that undergone quantitative and qualitative pigment, monosaccharide and aminoacid analyses with the use of HPLC methodology. Eight pigments (chlorophyll α, chlorophyll c, fucoxanthin, zeaxanthin, 19′-butanoylofucoxanthin, 19′-hexanoylofucoxanthin, peridinin and phaeophytin α) were identified and confirmed the species viability and their state of senescence. The qualitative composition of the recorded 8 monosaccharides (glucose, galactose, xylose, fucose, mannose, rhamnose, arabinose and glucosamine) and 15 aminoacids (arginine, glutamine, aspartate, serine, lysine, glysine, threonine, alanine, tyrosine, methionine, valine, phenylalanine, isoleucine, leucine and histidine) was similar in all cultures, but their quantitative composition differed among them and this might be due to their differences in species composition. The results also showed that the relative abundance of aminoacids and monosaccharides depended on the physiological state of the cells, the former being more abundant during the exponential phase and the latter mainly during the stationary phase of the cultures.