The average lifetime of a population in a varying environment

I derive an approximate formula relating the average time to extinction of a population in a varying environment to its initial size, its equilibrium size (if it is self-regulated), its innate capacity for natural increase, and the impact upon it of environmental variation. The greater the impact of environmental variation, the more slowly a population's prospective lifetime increases with increase in its equilibrium size. The lifetimes of populations greatly influenced by environmental variation are more sensitive to the relative amplitude of fluctuation in their numbers than to their equilibrium size. Since species tend to avoid competitive displacement by specializing, rendering themselves more sensitive to environmental change, and since populations are no more likely to risk extinction in one environment than in another, the degree to which a community's populations fluctuate will be unrelated to environmental stability.     

Treatment at different depths and vertical mixing within a 1-m deep horizontal subsurface-flow wetland

The aim of this study was to examine the variation in treatment performance at three depths, and the degree of vertical mixing, within a 1.0 m deep horizontal subsurface-flow constructed wetland (HSSF-CW) planted with Schoenoplectus tabernaemontani (Gmel.) Palla, and treating primary settled municipal wastewater in sub-tropical New South Wales, Australia. Water samples were collected from the upper (0.17 m), middle (0.5 m), and lower (0.83 m) depths at five equi-spaced sample points along the longitudinal axis of the 8.8 m² bed during two trials. Analysis of covariance (ANCOVA) indicated that the rate of pollutant concentration reduction between the three depths was not significantly different (p > 0.05) for all of the measured parameters (dissolved oxygen (DO), hydrogen electrode potentials (E_h), 5-day biochemical oxygen demand (BOD₅)) total nitrogen (TN), TKN, and NH₄-N. Thus, it can be concluded that the break-down of contaminants as wastewater moved through the HSSF-CW was approximately uniform across the 1.0 m depth profile. The lack of a significant depth effect can be largely explained by the substantial amount of vertical mixing that was observed when a pulse of lithium tracer was injected into the middle depth of the first intermediate sampling point. The tracer rapidly migrated vertically into the upper and lower depths as water moved through the bed and was almost completely mixed between the three depths by the time it reached the last intermediate sampling point.The majority of BOD₅ removal occurred within the first-third of the bed where vegetation cover was poor. Performance of the bed declined over time from Trial 1 to Trial 2, possibly due to a cumulative build-up of organic matter within the substrate as a result of limited oxygen transfer throughout the 1.0 m depth of substrate via root leakage or diffusion across the air–water interface. Root penetration was limited to the upper 0.4 m of the substrate, with the majority of below-ground biomass forming a dense mat in the upper 0.2 m. A comparison of two-parameter (K–C^*) first-order volumetric rate constant (K_v20) with those obtained from 0.4 to 0.6 m deep HSSF-CW in the same region indicate that a doubling of the wetted depth resulted in no improvement in BOD₅ removal and a decline in TN removal on an areal basis. Further investigations are warranted, comparing the performance of replicated beds spanning a range of depths (e.g. 0.25, 0.5 and 1.0 m) in order to quantitatively determine the optimal depth of HSSF-CWs treating domestic wastewater.     

Assessment of glycinebetaine and proline compartmentation by analysis of isolated beet vacuoles

Vacuoles isolated from storage root tissue of red beet (Beta vulgaris L.) do not leak significant quantities of betanin, sucrose, Na⁺ or K⁺ during isolation. This indicates that analysis of vacuoles in vitro gives meanigful information about the compartmentation of solutes in vivo. Preparations of vacouoles were used to determine the distribution of glycinebetaine and proline between vacuole and cytoplasm in beet cells. Both compounds were detected in preparations of isolated beet vacuoles. In the case of glycinebetaine it was shown that this solute was associated with the vacuoles, not with the small number of other organelles which contaminated the preparations. The vacuolar pool accounted for 26 to 84% of the total tissue glycinebetaine and 17 to 57% of the proline. Concentrations of these compounds in vacuole and cytoplasm were calculated and were always higher in the cytoplasm than in the vacuole. The concentration gradient across the tonoplast varied considerably. The significance of these results is discussed in relation to the hypothesis that glycinebetaine and proline function as benign cytoplasmic osmotica.Abbreviations A₅₃₇ absorbance at 537 nm - MES 2-(N-morpholino)-ethanesulphonic acid - Na₂EDTA ethylenediaminetetraacetic acid, disodium salt - SDS sodium dodecyl sulphate - Tris tris(hydroxymethyl)methylamine     

Electron paramagnetic resonance studies of a ras p21-MnIIGDP complex in solution.

The number of water molecules bound to Mn2+ in the complex with a variant of Ha ras p21 and GDP has been determined by electron paramagnetic resonance (EPR) measurements in 17O-enriched water. A resolution enhancement method has been used to improve quantitation of the spectral data. These spectroscopic measurements show that Mn2+ has four water ligands in this complex, a result in agreement with the conclusions of a previous paper [Smithers, G. W., Poe, M., Latwesen, D. G., & Reed, G. H. (1990) Arch. Biochem. Biophys. 280, 416-420]. The resolution enhancement method has also been applied in a measurement of the 17O-Mn2+ superhyperfine coupling constant of 17O in the beta-phosphate of the GDP in the ras p21 complex. The intrinsically narrow EPR signals of Mn2+ in the complex with ras p21 and GDP in 2H2O respond to resolution enhancement such that the superhyperfine splitting from the 17O nuclear spin (I = 5/2) becomes visible in the EPR signals. An 17O-Mn2+ superhyperfine coupling constant is obtained from simulation of the resolution-enhanced EPR spectrum.     

Formate acts as a diffusible signal to induce Salmonella invasion

To infect an animal host, Salmonella enterica serovar Typhimurium must penetrate the intestinal epithelial barrier. This process of invasion requires a type III secretion system encoded within Salmonella pathogenicity island I (SPI1). We found that a mutant with deletions of the acetate kinase and phosphotransacetylase genes (ackA-pta) was deficient in invasion and SPI1 expression but that invasion gene expression was completely restored by supplying medium conditioned by growth of the wild-type strain, suggesting that a signal produced by the wild type, but not by the ackA-pta mutant, was required for invasion. This mutant also excreted 68-fold-less formate into the culture medium, and the addition of sodium formate to cultures restored both the expression of SPI1 and the invasion of cultured epithelial cells by the mutant. The effect of formate was pH dependent, requiring a pH below neutrality, and studies in mice showed that the distal ileum, the preferred site of Salmonella invasion in this species, had the appropriate formate concentration and pH to elicit invasion, while the cecum contained no detectable formate. Furthermore, we found that formate affected the major regulators of SPI1, hilA and hilD, but that the primary routes of formate metabolism played no role in its activity as a signal.     

ω-Conotoxin GVIA mimetics based on an anthranilamide core: Effect of variation in ammonium side chain lengths and incorporation of fluorine

A number of ω-conotoxin GVIA mimetics based on an anthranilamide core were prepared and tested for their affinity for rat brain Ca_v2.2 channels. Features such as the presence of hydroxyl and fluoro substituents on the tyrosine side chain mimic, the length of the chains on the lysine/arginine side chain mimics and the use of diguanidino and diamino substituents rather than mono-guanidine/mono-amine substitution were examined. The diguanidinylated compounds proved to be the most active and deletion of the hydroxyl substituent had a limited influence on activity. The SAR associated with variation in the lysine/arginine side chain mimics was not strong. The introduction of a fluoro substituent into the tyrosine mimic produced the most active compound prepared in this study (2g), with an EC₅₀ at rat brain Ca_v2.2 channels of 6 μM.