A multiplex PCR approach to simultaneously genotype potato towards the resistance alleles Ry-f sto and Ns

A simple and robust multiplex PCR approach was developed for detection of the alleles Ry-f _sto and Ns conferring resistance of potato to Potato Virus Y (PVY) and Potato Virus S (PVS), respectively. Cleaved amplified polymorphic sequence (CAPS) markers GP122₅₆₄ linked to Ry-f _sto and SC811₂₆₀ linked to Ns were amplified in one PCR reaction and identified after simultaneous digestion of the amplicons with restriction enzymes EcoRV and MboI. Effectiveness of this procedure for marker-assisted selection was confirmed in 55 potato cultivars.     

New group of xylene linker-containing acetylcholinesterase reactivators as antidotes against the nerve agent cyclosarin

Nerve agents such as sarin, cyclosarin and tabun are organophosphorus substances able to inhibit the enzyme acetylcholinesterase (AChE; EC 3.1.1.7). AChE reactivators and anticholinergics are generally used as antidotes in the case of intoxication with these agents. None of the known AChE reactivators is able to reactivate AChE inhibited by all nerve agents used. In this work, reactivation potency of nine newly developed AChE reactivators with an incorporated xylene ring in their structure was measured in vitro. Cyclosarin was chosen as an appropriate member of the nerve agent family. Reactivation potency of the tested AChE reactivators was compared with the gold standard of AChE reactivators--pralidoxime. Two oximes (K107 and K108) surpassed the reactivation potency of pralidoxime. Moreover, from the obtained results it could be deduced that AChE reactivators with a functional oxime group in position-2 are the most potent AChE reactivators in the case of cyclosarin intoxications.     

Palaeogeobotanical evidence of middle Holocene stratigraphic hiatuses in Czechoslovakia and their explanation

Palaeogeobotanical evidence of middle Holocene stratigraphic hiatuses in the minerotrophic mires of Czechoslovakia is presented and profiles showing similar phenomenon in other European countries are mentioned. Possible explanations of the middle Holocene and other stratigraphic hiatuses are discussed. The effect of intensive peat decomposition during some successional stages of mire development (above all the carr vegetation stages) is regarded as one cause.     

Modulation of porphyrin binding to serum albumin by pH

In this study, we show that the difference in acidity of functional groups in porphyrin photosensitizers provides a meaningful avenue to achieve differential localization and retention of porphyrins in tissues and cells, and in the end could be a positive factor in the photodynamic treatment of cancer (PDT). We have demonstrated that meso-tetraphenylporphyrin derivative with four phosphonate (bond P(double bond O)(bond OH)(2)) moieties exists in aqueous solutions mainly in four forms that differ by a degree of protonation of the porphyrin ring and ionization of the phosphonate group. It is shown that each porphyrin form has different affinities toward the model protein (bovine serum albumin, BSA). Thus pH of the medium significantly modulates the affinity of the phosphonate porphyrin toward BSA. At lower pH (pH 6.0), the phosphonate porphyrin and BSA form a complex with affinity constant of K(b)=6.9 x 10(5) M(-1), while at pH 7.0 the K(b)=6.1 x 10(5) M(-1). At pH 8.0 the association is significantly lower. Because cancerous cells have generally lower pH (pH approximately 6.9) compared to healthy cells (pH approximately 7.4), the pH of such cells could be a decisive factor for cellular retention of the porphyrin in the form of an associate with intracellular proteins. Moreover, we have also demonstrated that the protonation/deprotonation equilibria do not negatively affect the photophysical properties or ability of phosphonate porphyrin to generate singlet oxygen.     

Social complexity and transitive inference in corvids

The social complexity hypothesis asserts that animals living in large social groups should display enhanced cognitive abilities along predictable dimensions. To test this concept, we compared highly social pinyon jays,Gymnorhinus cyanocephalus , with relatively nonsocial western scrub-jays, Aphelocoma californica, on two complex cognitive tasks relevant to the ability to track and assess social relationships. Pinyon jays learned to track multiple dyadic relationships more rapidly and more accurately than scrub-jays and appeared to display a more robust and accurate mechanism of transitive inference. These results provide a clear demonstration of the association between social complexity and cognition in animals. Copyright 2003 Published by Elsevier Science Ltd on behalf of The Association for the Study of Animal Behaviour.      

Failure of simple optimal foraging models to predict residence time when patch quality is uncertain

Blue jays (Cyanocitta cristata) were presented with a foragingsituation in which half of the patches they encountered containedno prey and half contained a single prey item. Experimentallydetermined probability distributions controlled prey arrivaltimes in those patches that contained prey. Patch residencein empty patches was studied during four experiments. In thefirst, prey arrival was exponentially distributed. Residencetimes increased with travel time as predicted by a rate-maximizationmodel, but the bird stayed in empty patches much longer thanpredicted. During the second experiment, prey arrival was uniformlydistributed. The jays again stayed longer than optimal, andpatch residence times increased as travel time increased, althoughthe residence time that maximized rate of intake was independentof travel time under these conditions. In the third experiment,exponential and uniform patches were randomly intermixed. Thejays showed larger travel-time effects in the exponential thanin the uniform patch. However, the travel-time effect in theuniform patch was contrary to rate-maximization predictions,and the birds again overstayed in both patch types. In the fourthexperiment, prefeeding at the start of each foraging bout slightlyincreased overstaying rather than decreasing overstaying, aswould be expected if overstaying were due to underestimatingenvironmental quality. Consistent and dramatic overstaying anda travel-time effect under conditions where travel time hasno effect on optimal residence times suggest that the rate-maximizationapproach does not apply to foraging problems involving patchuncertainty.     

Chronic hypoperfusion alters the content and structure of proteins and lipids of rat brain homogenates: a Fourier transform infrared spectroscopy study

Arteriovenous malformations (AVMs), masses of abnormal blood vessels which grow in the brain, produce high flow shunts that steal blood from surrounding brain tissue, which is chronically hypoperfused. Hypoperfusion is a condition of inadequate tissue perfusion and oxygenation, resulting in abnormal tissue metabolism. Fourier transform infrared (FTIR) spectroscopy is used in this study to investigate the effect of hypoperfusion on homogenized rat brain samples at the molecular level. The results suggest that the lipid content increases, the protein content decreases, the lipid-to-protein ratio increases, and the state of order of the lipids increases in the hypoperfused brain samples. FTIR results also revealed that, owing to hypoperfusion, not only the protein synthesis but also the protein secondary structure profile is altered in favor of -sheets and random coils. These findings clearly demonstrate that, FTIR spectroscopy can be used to extract valuable information at the molecular level so as to have a better understanding of the effect of hypoperfusion on rat brain.