Growth cycle stage-dependent NaCl induction of plasma membrane H+-ATPase mRNA accumulation in de-adapted tobacco cells

A cDNA clone encoding an isoform of the plasma membrane H⁺-ATPase was isolated from Nicotiana tabacum. The steady-state plasma membrane H⁺-ATPase message levels were the same in unadapted tobacco cells and tobacco cells adapted to 428 mol m⁻³ NaCl. When cells adapted to 428 mol m⁻³ NaCl maintained in the absence of NaCl (deadapted) for an excess of 100 passages were exposed to 400 mol m⁻³ NaCl for 24 h, there was an increased accumulation of plasma membrane H⁺-ATPase message. The NaCl responsiveness of the deadapted cells was dependent upon the growth cycle stage. Alterations in the levels of plasma membrane FT-ATPase message during the growth cycle support a role for the H⁺-ATPase in cell growth. These results document the induction by NaCl of plasma membrane FT-ATPase message accumulation in tobacco cells, and suggest that enhanced expression of the plasma membrane FT-ATPase has a role in the short term response of cells of NaCl, but is not necessarily involved in long-term adaptation.     

Nucleotide Sequences of DNA Fragments of Encephalitozoon cuniculi Amplified by Polymerase Chain Reaction with Primers Regarded as Specific for Echinococcus

Encephalitozoon -like spores were separated from a human echinococcal liver lesion, which was caused by Echinococcus multilocularis. They were found to fall into the species Encephalitozoon cuniculi , which was shown to have En. cunniculi specific DNA by way of polymerase chain reaction (PCR). We also used PCR to genetically discriminate between the En. cuniculi spores and the Ec. multilocularis larvae. Two primer sets, known to be specific for Echinococcus , were examined. These primers were expected to work normally when the two quite different DNA preparations were tested as templates, i.e. only Echinococcus DNA could give a positive signal in the PCR tests. However, it was found that the two Echinococcus -specific primer sets could amplify not only EC. multilocularis DNA, but also En. cuniculi spore DNA. We then tried to determine the order of nucleotides in the Echinococcus -specific primers-amplified En. cuniculi PCR products and compared the determined sequences with those of Ec. multilocularis. The results clearly indicated that sequencing made little difference between En. cuniculi and Ec. multilocularis.     

FORMATION OF LIGNIN IN TISSUE CULTURE OF PINUS STROBUS

The formation of shikimic acid and lignin from glucose in thecambium tissue was investigated. Glucose-1-¹⁴C, shikimic acid-G-¹⁴C, sodium acetate-1-¹⁴C and sodium acetate-2-¹⁴C were administeredto the tissue culture of strob pine. Glucose was well incorporatedinto shikimic acid, but acetic acid was less effective. Shikimicacid was very efficient as a precursor of aromatic nucleus andglucose was also converted efficiently to lignin. The extentof incorporation of acetic acid, however, was considerably low.A possibility was discussed that in the cultured tissue ligninand its precursor were synthesized from glucose via the shikimicacid pathway. (Received May 14, 1960; )     

Water temperature determines strength of top-down control in a stream food web

1. We examined effects of water temperature on the community structure of a three trophic level food chain (predatory fish, herbivorous caddisfly larvae and periphyton) in boreal streams. We used laboratory experiments to examine (i) the effects of water temperature on feeding activities of fish and caddisfly larvae and on periphyton productivity, to evaluate the thermal effects on each trophic level (species‐level experiment), and (ii) the effects of water temperature on predation pressure of fish on abundance of the lower trophic levels, to evaluate how temperature affects top‐down control by fish (community‐level experiment). 2. In the species‐level experiment, feeding activity of fish was high at 12 °C, which coincides with the mean summer temperature in forested streams of Hokkaido, Japan, but was depressed at 3 °C, which coincides with the mean winter temperature, and also above 18 °C, which coincides with the near maximum summer temperatures. Periphyton productivity increased over the range of water temperatures. 3. In the community‐level experiments, a top‐down effect of fish on the abundance of caddisfly larvae and periphyton was clear at 12 °C. This effect was not observed at 3 and 21 °C because of low predation pressure of fish at these temperatures. 4. These experiments revealed that trophic cascading effects may vary with temperature even in the presence of abundant predators. Physiological depression of predators because of thermal stress can alter top‐down control and lead to changes in community structure. 5. We suggest that thermal habitat alteration can change food web structure via combinations of direct and indirect trophic interactions.     

Developmental morphology of foliose shoots and seedlings of Dalzellia zeylanica (Podostemaceae) with special reference to their meristems

The developmental morphology of seedlings and shoots of Dalzellia zeylanica was examined with reference to the meristem in order to understand the dorsiventral, foliose shoot. In seedlings, no obvious primary shoot and no root are formed. Subsequent to disappearance of the vestigial primary shoot meristem, two shoot meristems are established in the axils of the cotyledons, one of which grows into a secondary shoot. Microtome and SEM examinations of mature plants show that the shoot meristem is complex, comprising three zones along the shoot margin. The organogenetic zone, equivalent to the shoot apical meristem, produces dorsal leaves proximally and much fewer marginal leaves distally. During development, the zone repeatedly changes into a dorsal zone, while a new organogenetic zone is formed in an area between developing marginal leaves, resulting in the alternation of the organogenetic and dorsal zones, which allowed development of the coenosomic structure of the shoot. The dorsal and ventral zones do not produce leaves, but contribute to shoot expansion. The ventral zone also forces the marginal leaves to shift to the lateral side of the shoot. The rosette with tufted leaves might be a modification of the short shoot (ramulus) of other Tristichoideae.  © 2004 The Linnean Society of London, Botanical Journal of the Linnean Society , 2004, 144 , 289–302.     

Phylogenetic analysis of the insect order Odonata using 28S and 16S rDNA sequences: a comparison between data sets with different evolutionary rates

Molecular phylogenetic analyses were conducted for the insect order Odonata with a focus on testing the effectiveness of a slowly evolving gene to resolve deep branching and also to examine: (i) the monophyly of damselflies (the suborder Zygoptera); and (ii) the phylogenetic position of the relict dragonfly Epiophlebia superstes. Two independent molecular sources were used to reconstruct phylogeny: the 16S rRNA gene on the mitochondrial genome and the 28S rRNA gene on the nuclear genome. A comparison of the sequences showed that the obtained 28S rDNA sequences have evolved at a much slower rate than the 16S rDNA, and that the former is better than the latter for resolving deep branching in the Odonata. Both molecular sources indicated that the Zygoptera are paraphyletic, and when a reasonable weighting for among‐site rate variation was enforced for the 16S rDNA data set, E. superstes was placed between the two remaining major suborders, namely, Zygoptera and Anisoptera (dragonflies). Character reconstruction analysis suggests that multiple hits at the rapidly evolving sites in the 16S rDNA degenerated the phylogenetic signals of the data set.     

Revising a process-based biogeochemistry model (DNDC) to simulate methane emission from rice paddy fields under various residue management and fertilizer regimes

A comprehensive biogeochemistry model, DNDC, was revised to simulate crop growth and soil processes more explicitly and improve its ability to estimate methane (CH₄) emission from rice paddy fields under a wide range of climatic and agronomic conditions. The revised model simulates rice growth by tracking photosynthesis, respiration, C allocation, tillering, and release of organic C and O₂ from roots. For anaerobic soil processes, it quantifies the production of electron donors [H₂ and dissolved organic carbon (DOC)] by decomposition and rice root exudation, and simulates CH₄ production and other reductive reactions based on the availability of electron donors and acceptors (NO₃^?, Mn⁴⁺, Fe³⁺, and SO₄^2?). Methane emission through rice is simulated by a diffusion routine based on the conductance of tillers and the CH₄ concentration in soil water. The revised DNDC was tested against observations at three rice paddy sites in Japan and China with varying rice residue management and fertilization, and produced estimates consistent with observations for the variation in CH₄ emission as a function of residue management. It also successfully predicted the negative effect of (NH₄)₂SO₄ on CH₄ emission, which the current model missed. Predicted CH₄ emission was highly sensitive to the content of reducible soil Fe³⁺, which is the dominant electron acceptor in anaerobic soils. The revised DNDC generally gave acceptable predictions of seasonal CH₄ emission, but not of daily CH₄ fluxes, suggesting the model's immaturity in describing soil heterogeneity or rice cultivar‐specific characteristics of CH₄ transport. It also overestimated CH₄ emission at one site in a year with low temperatures, suggesting uncertainty in root biomass estimates due to the model's failure to consider the temperature dependence of leaf area development. Nevertheless, the revised DNDC explicitly reflects the effects of soil electron donors and acceptors, and can be used to quantitatively estimate CH₄ emissions from rice fields under a range of conditions.