The Effects of Ultraviolet Radiation on the Biology of Amphibians

SYNOPSIS. Potential causes for the global decline of amphibiansinclude habitat loss, disease, environmental contaminants andclimate changes. The diminishing ozone layer and consequentincrease of ultraviolet-B radiation reaching the earth's surfacehas been hypothesized to be a mortality factor, especially inhabitats otherwise undisturbed. We discuss the fundamental physicsof UV and types of biological damage after exposure. A deleteriouschange in DNA, especially the production of pyrimidine dimers,is a main effect of UVB exposure. Damaged DNA can be repairedby enzymes such as photolyase when organisms are irradiatedwith UVA or visible light. We review studies including laboratoryand field approaches on damage to amphibians from UVB exposure.Field studies in which embryos were exposed to natural sunlightor sunlight with UVB removed have shown conflicting results:some show increased embryonic mortality after UVB exposure,whereas others show that current levels of UVB are not detrimentalto amphibian embryos. The abiotic factors such as water depth,water color, and dissolved organic content of aquatic ovipositionsites effectively reduces UVB penetration through water andreduces exposure to UVB of all life history stages. Biotic factorssuch as jelly capsules around eggs, melanin pigmentation ofeggs, and color of larvae and metamorphosed forms further reduceeffectiveness of UVB penetration. We suggest areas of futureresearch to test the hypothesis of the causal connection betweencurrent UVB levels and amphibian decline.     

Colony-Site Selection Drives Management Priorities for Yelkouan Shearwater Populations

Abstract: We tested whether colony-site availability could allow for an increase in the unusually small breeding populations of yelkouan shearwater (Puffinus yelkouan) on the islands of the Port-Cros National Park (France) if feral cat eradication were undertaken. Comparisons between colony and noncolony sites indicated yelkouan shearwaters preferred deep-soiled and low-outcrop-covered coastal sites. A substrate cover, light avoidance, and sea proximity model suggested that 17.5% of unoccupied sites are suitable for colony establishment. The low proportion of suitable sites currently used by yelkouan shearwaters suggests that these colonies could be refuges and that feral cat eradication will probably lead to a breeding population increase.     

Isolation of polymorphic tetranucleotide microsatellite markers for the black‐bellied seedcracker (Pyrenestes ostrinus)

We have isolated 10 polymorphic microsatellite markers for the black‐bellied seedcracker (Pyrenestes ostrinus) from genomic libraries enriched either for (AAGG)_n or (ATCT)_n repetitive elements and characterized them in 39 individuals. The number of alleles ranged from two to 27 per locus with the observed heterozygosity ranging from 0.38 to 0.94. These markers will be useful for analysis of questions concerning parentage and population genetic structure.     

Reduced N cycling in response to elevated CO2, warming,and drought in a Danish heathland: Synthesizing results of the CLIMAITE project after two years of treatments

Field‐scale experiments simulating realistic future climate scenarios are important tools for investigating the effects of current and future climate changes on ecosystem functioning and biogeochemical cycling. We exposed a seminatural Danish heathland ecosystem to elevated atmospheric carbon dioxide (CO₂), warming, and extended summer drought in all combinations. Here, we report on the short‐term responses of the nitrogen (N) cycle after 2 years of treatments. Elevated CO₂ significantly affected aboveground stoichiometry by increasing the carbon to nitrogen (C/N) ratios in the leaves of both co‐dominant species (Calluna vulgaris and Deschampsia flexuosa), as well as the C/N ratios of Calluna flowers and by reducing the N concentration of Deschampsia litter. Belowground, elevated CO₂ had only minor effects, whereas warming increased N turnover, as indicated by increased rates of microbial NH₄⁺ consumption, gross mineralization, potential nitrification, denitrification and N₂O emissions. Drought reduced belowground gross N mineralization and decreased fauna N mass and fauna N mineralization. Leaching was unaffected by treatments but was significantly higher across all treatments in the second year than in the much drier first year indicating that ecosystem N loss is highly sensitive to changes and variability in amount and timing of precipitation. Interactions between treatments were common and although some synergistic effects were observed, antagonism dominated the interactive responses in treatment combinations, i.e. responses were smaller in combinations than in single treatments. Nonetheless, increased C/N ratios of photosynthetic tissue in response to elevated CO₂, as well as drought‐induced decreases in litter N production and fauna N mineralization prevailed in the full treatment combination. Overall, the simulated future climate scenario therefore lead to reduced N turnover, which could act to reduce the potential growth response of plants to elevated atmospheric CO₂ concentration.     

Evidence for fatal collisions and kleptoparasitism while plunge‐diving in Gannets

Plunge‐diving is a highly successful strategy for dealing with the challenges confronting birds feeding on pelagic prey. We tested for evidence of fatal injuries due to collision between conspecifics in plunge‐diving Australasian Gannets Morus serrator and Cape Gannets Morus capensis, respectively, by performing post‐mortem examinations of carcasses recovered from New Zealand waters and analysing video footage of Cape Gannet foraging events from South Africa. We found evidence of accidental collisions between Gannets and also observed a case of attempted kleptoparasitism, in which a diving Cape Gannet targeted a previously captured fish in the beak of a conspecific.     

Bennettitalean leaf cuticle fragments (here Anomozamites and Pterophyllum) can be used interchangeably in stomatal frequency‐based palaeo‐CO2 reconstructions

Abstract: Bennettites are an abundant and frequently well‐preserved component of many Mesozoic fossil floras, often playing an important ecological role in flood plain vegetation communities. During a recent study focusing on stomatal indices of Triassic–Jurassic fossil plants, it became evident that the leaf fragments of two bennettite genera Anomozamites Schimper (1870) emend. Harris (1969) and Pterophyllum Brongniart (1825) display a significant overlap of leaf shape as well as cuticular characters. Owing to the preference of recognition of single taxa (ideally species) for the stomatal method, we use a database of 70 leaf fragments of Anomozamites and Pterophyllum compressions from five isotaphonomic Late Triassic sedimentary beds of Astartekløft in East Greenland to test whether leaf and cuticle fragments of the two genera can be separated using a range of quantitative and qualitative morphological and statistical analyses. None of the observed characters – including stomatal frequencies – could be applied to separate the fragments of the two genera into well‐defined groups. Our results therefore indicate that fragmented material and dispersed cuticles cannot be utilized to distinguish between Anomozamites or Pterophyllum at the genus level, but that instead these cuticle fragments may be used interchangeably as stomatal proxies. Classification of fossil leaves into either of these genera is thus only possible given adequate preservation of macro‐morphology and is not possible based solely on cuticle morphology. We suggest that this large inter‐ and intra‐generic morphological variation in both leaf and cuticle traits within Anomozamites and Pterophyllum may be related to the bennettites’ role as understory plants, experiencing a range of micro‐environmental conditions, perhaps depending mainly on sun exposure. Based on the results obtained in this study, we conclude that Anomozamites and Pterophyllum cuticle fragments can be employed interchangeably in palaeo [CO₂] reconstructions based on the stomatal method, thus potentially annexing a plethora of bennettitalean fossil plant material as CO₂ proxies, including dispersed cuticles.     

Changes in aquatic insect emergence in response to whole-lake experimental manipulations of introduced trout

1. Insects emerging from mountain lakes provide an important food source for many terrestrial predators. The amount of insect subsidy that emerges from lakes is influenced by predator composition, but predator effects could be ameliorated by greater habitat complexity. We conducted a replicated whole‐lake experiment to test the effects of introduced fish predators on the abundance and composition of aquatic insects within and emerging from the littoral zone of 16 mountain lakes in the Trinity Alps Wilderness in northwestern California. 2. Study treatments matched the fisheries management options being implemented in California’s wilderness areas: (i) continued stocking with non‐native trout, (ii) suspension of stocking, and (iii) suspension of stocking and removal of fish. We also included four naturally fishless ‘reference’ lakes. We compared abundances and biomass of emerging aquatic insects before treatments were initiated and for 3 years following their establishment. Abundances of benthic insects were also compared in the third year post‐treatment. 3. Trout removal rapidly increased abundances of mayflies, caddisflies, and insect predators, and overall insect biomass emerging from lakes. No significant differences were found between the suspension of stocking lakes and continued stocking lakes. Fish density was a more important predictor of aquatic insect emergence than habitat complexity. 4. Mayfly larvae responded positively to fish removal and caddisfly larvae tended to be more abundant in lakes without fish, but we did not detect effects on abundance of predatory insects. However, we found large insect predators in shallower water in lakes with fish compared to fish removal or fish‐free reference lakes. 5. These results provide insights into the continuing effects of past and current fish stocking practices on the flow of insect prey from mountain lakes into the neighbouring terrestrial environment. We also show that these consequences can rapidly be reversed by removing non‐native fishes.     

Warming and elevated CO2 affect the relationship between seed mass, germinability and seedling growth in Austrodanthonia caespitosa, a dominant Australian grass

While the influence of elevated CO₂ on the production, mass and quality of plant seeds has been well studied, the effect of warming on these characters is largely unknown; and there is practically no information on possible interactions between warming and elevated CO₂, despite the importance of these characters in population maintenance and recovery. Here, we present the impacts of elevated CO₂ and warming, both in isolation and combination, on seed production, mass, quality, germination success and subsequent seedling growth of Austrodanthonia caespitosa , a dominant temperate C₃ grass from Australia, using seeds collected from the TasFACE experiment. Mean seed production and mass were not significantly affected by either elevated CO₂ or warming, but elevated CO₂ more than doubled the proportion of very light, inviable seeds ( P < 0.05) and halved mean seed N concentration ( P < 0.04) and N content ( P < 0.03). The dependence of seed germination success on seed mass was affected by an elevated CO₂× warming interaction ( P < 0.004), such that maternal exposure to elevated CO₂ or warming reduced germination if applied in isolation, but not when applied in combination. Maternal effects were retained when seedlings were grown in a common environment for 6 weeks, with seedlings descended from warmed plants 20% smaller ( P < 0.008) with a higher root : shoot ratio ( P < 0.001) than those from unwarmed plants. Given that both elevated CO₂ and warming reduced seed mass, quality, germinability or seedling growth, it is likely that global change will reduce population growth or distribution of this dominant species.     

The role of PilZ domain proteins in the virulence of Xanthomonas campestris pv. campestris

Cyclic di‐GMP [(bis‐(3′–5′)‐cyclic di‐guanosine monophosphate)] is an almost ubiquitous second messenger in bacteria that is implicated in the regulation of a range of functions that include developmental transitions, aggregative behaviour, adhesion, biofilm formation and virulence. Comparatively little is known about the mechanism(s) by which cyclic di‐GMP exerts these various regulatory effects. PilZ has been identified as a cyclic di‐GMP binding protein domain; proteins with this domain are involved in regulation of specific cellular processes, including the virulence of animal pathogens. Here we have examined the role of PilZ domain proteins in virulence and the regulation of virulence factor synthesis in Xanthomonas campestris pv. campestris (Xcc), the causal agent of black rot of crucifers. The Xcc genome encodes four proteins (XC0965, XC2249, XC2317 and XC3221) that have a PilZ domain. Mutation of XC0965, XC2249 and XC3221 led to a significant reduction of virulence in Chinese radish. Mutation of XC2249 and XC3221 led to a reduction in motility whereas mutation of XC2249 and XC0965 affected extracellular enzyme production. All mutant strains were unaffected in biofilm formation in vitro. The reduction of virulence following mutation of XC3221 could not be wholly attributed to an effect on motility as mutation of pilA, which abolishes motility, has a lesser effect on virulence.