Relationship of macrophyte-mediated changes in the water column to periphyton composition and abundance

SUMMARY. 1. Dense growths of Myriophyllum heterophyllum influenced temperature, dissolved oxygen, pH and light levels in the littoral waters of Lake Winnipesaukee, a soft-water. New England lake. Periphyton species composition and abundance (algal units cm' stem) were related to the macrophyte-mediated changes in the physicochemical environment.
2. Duringearlysummer, M. heterophyllum occupied onlythe lower part of the water column. Limnetic and littoral waters exchanged readily and were chemically similar. Early summer periphyton species composition was dominated by diatoms from the phytoplankton, entangled in the finely dissected leaves of M. heterophyllum.
3. By mid-summer, M. heterophyllum occupied the entire watercolumn of the littoral zone. The metabolic and photosynthetic activity and dense foliage of M. heterophyllum created marked vertical gradients in physicochemical conditions. Mid-day temperature, dissolved oxygen, pH and light levels were maximal in the surface waters of the M. heterophyllum mat during the summer. Concurrently, periphyton species composition shifted to blue-green and then to a filamentous green alga on the apex and mid-stem. On the lower stem, diatoms consistently dominated the periphyton.
4. Periphyton abundance on the apex was inversely related to apical elongation. Temporal fluctuations of periphyton abundance on the lower and mid-stem were small throughout the study. Periphyton abundance was lowest on the lower stem, where the deteriorating leaves provided less surface area for colonization.     

Investigation of the methyl fluoride technique for determining rhizospheric methane oxidation

Methane oxidation rates in the rhizosphere of Pontederia cordata,Sagittaria lancifolia, and Typha latifolia were quantified in fieldstudies using the methyl fluoride inhibition technique. An averageoxidation of 22.9 ± 17.7% (sd,n = 44) was found for all field experiments (oxidation is expressedas a % of total potential emission in the presumedabsence of oxidation). Greenhouse experiments using the same techniquegave an average rhizospheric oxidation of 64.9 ±17.0% (sd, n = 44). Comparison of a subset ofgreenhouse plants with the methyl fluoride (MF) and a light oxic/darkanoxic (LO/DA) technique for suppressing CH₄ oxidationyielded similar percentages (57.7 ±15.0% for MF and 58.5 ±13.9% for LO/DA, n = 11). Rhizospheric oxidationdisplayed a seasonal trend in Typha latifolia with decreasingoxidation percentages during warmer months as the importance ofrhizospheric CH₄ oxidation declined relative toCH₄ emission (46.5 ±13.8% in December and 13.5 ±1.7% in July). However, the absolute rateof methane oxidation was highest during the warmer months (44.2± 3.4 mg m^-2 d^-1 inDecember and 318.7 ± 151.4 mg m^-2d^-1 in July). As methane emission rates increased,the sensitivity of the methyl fluoride technique decreased dueto the larger error between replicate flux measurements.     

A Comparison of Field and Molecular Techniques for Sexing Beavers

Abstract: The traditional method of sex identification in beavers (Castor canadensis) by external palpation can be inaccurate. We tested 2 genetic methods for determining sex in beavers, the zinc-finger DNA marker and the Y chromosome-specific sex determining region (SRY) marker. The SRY marker identified sex correctly in 57 of 67 (85%) beavers, whereas the zinc-finger technique was successful less often in only 48 of 67 (72%) animals. Sex was correctly assigned by palpation for 21 of 27 beavers (78%). Beaver studies in which accurate sex identification is critical may benefit by verifying the sex of individuals using one or both of these molecular markers.     

Parasite genetic differentiation by habitat type and host species: molecular epidemiology of Schistosoma japonicum in hilly and marshland areas of Anhui Province, China

Schistosoma japonicum , a parasite of significant public health importance in parts of China and Southeast Asia, is a true generalist pathogen with over 40 species of mammals suspected as definitive host reservoirs. In order to characterize levels of parasite gene flow across host species and identify the most important zoonotic reservoirs, S. japonicum larvae (miracidia) were sampled from a range of definitive host species in two contrasting habitat types within Anhui Province, China: a low-lying marshland region, and a hilly region, where animal reservoir populations may be predicted to differ substantially. Miracidia samples were genotyped using seven multiplexed microsatellite markers. Hierarchical F -statistics and clustering analyses revealed substantial geographical structuring of S. japonicum populations within Anhui, with strong parasite genetic differentiation between habitat types. Within most villages, there was very little or no parasite genetic differentiation among host species, suggesting frequent S. japonicum gene flow, and thus also transmission, across species. Moreover, the data provide novel molecular evidence that rodents and dogs are potentially very important infection reservoirs in hilly regions, in contrast to bovines in the marshland regions. The parasite genetic differentiation between habitat types might therefore be associated with contrasting host reservoirs. The high levels of parasite gene flow observed across host species in sympatric areas have important implications for S. japonicum control, particularly in hilly regions where control of infection among wild rodent populations could be challenging.     

Genome‐wide single nucleotide polymorphisms reveal population history and adaptive divergence in wild guppies

Adaptation of guppies (Poecilia reticulata) to contrasting upland and lowland habitats has been extensively studied with respect to behaviour, morphology and life history traits. Yet population history has not been studied at the whole‐genome level. Although single nucleotide polymorphisms (SNPs) are the most abundant form of variation in many genomes and consequently very informative for a genome‐wide picture of standing natural variation in populations, genome‐wide SNP data are rarely available for wild vertebrates. Here we use genetically mapped SNP markers to comprehensively survey genetic variation within and among naturally occurring guppy populations from a wide geographic range in Trinidad and Venezuela. Results from three different clustering methods, Neighbor‐net, principal component analysis (PCA) and Bayesian analysis show that the population substructure agrees with geographic separation and largely with previously hypothesized patterns of historical colonization. Within major drainages (Caroni, Oropouche and Northern), populations are genetically similar, but those in different geographic regions are highly divergent from one another, with some indications of ancient shared polymorphisms. Clear genomic signatures of a previous introduction experiment were seen, and we detected additional potential admixture events. Headwater populations were significantly less heterozygous than downstream populations. Pairwise F_ST values revealed marked differences in allele frequencies among populations from different regions, and also among populations within the same region. F_ST outlier methods indicated some regions of the genome as being under directional selection. Overall, this study demonstrates the power of a genome‐wide SNP data set to inform for studies on natural variation, adaptation and evolution of wild populations     

Responses of soil respiration to elevated CO2, air warming, and changing soil water availability in a model old-field grassland

Responses of soil respiration to atmospheric and climatic change will have profound impacts on ecosystem and global carbon (C) cycling in the future. This study was conducted to examine effects on soil respiration of the concurrent driving factors of elevated atmospheric CO₂ concentration, air warming, and changing precipitation in a constructed old‐field grassland in eastern Tennessee, USA. Model ecosystems of seven old‐field species were established in open‐top chambers and treated with factorial combinations of ambient or elevated (+300 ppm) CO₂ concentration, ambient or elevated (+3 °C) air temperature, and high or low soil moisture content. During the 19‐month experimental period from June 2003 to December 2004, higher CO₂ concentration and soil water availability significantly increased mean soil respiration by 35.8% and 15.7%, respectively. The effects of air warming on soil respiration varied seasonally from small reductions to significant increases to no response, and there was no significant main effect. In the wet side of elevated CO₂ chambers, air warming consistently caused increases in soil respiration, whereas in the other three combinations of CO₂ and water treatments, warming tended to decrease soil respiration over the growing season but increase it over the winter. There were no interactive effects on soil respiration among any two or three treatment factors irrespective of time period. Treatment‐induced changes in soil temperature and moisture together explained 49%, 44%, and 56% of the seasonal variations of soil respiration responses to elevated CO₂, air warming, and changing precipitation, respectively. Additional indirect effects of seasonal dynamics and responses of plant growth on C substrate supply were indicated. Given the importance of indirect effects of the forcing factors and plant community dynamics on soil temperature, moisture, and C substrate, soil respiration response to climatic warming should not be represented in models as a simple temperature response function, and a more mechanistic representation including vegetation dynamics and substrate supply is needed.     

Singlet oxygen and photo-oxidative stress management in plants and algae

Photosynthetic organisms constantly face the threat of photo-oxidative stress from fluctuating light conditions and environmental stress. Plants and algae have developed an array of defences to protect the chloroplast from reactive oxygen species. Genetic and physiological studies have shown that antioxidant responses are important to high-light acclimation, both by directly scavenging or quenching reactive oxygen intermediates and by contributing reducing power for alternative electron transport pathways and excess energy dissipation. At present, the signalling events leading to up-regulation of antioxidant defences in high light remain a mystery. Recent advances toward understanding acclimation to oxidative stress in both photosynthetic and non-photosynthetic model organisms may illuminate how plants and algae respond to high-light stress. Although the role of hydrogen peroxide in high-light acclimation has been investigated, less is known about responses to singlet oxygen, a form of reactive oxygen that poses a significant threat specifically to photosynthetic organisms. This review will discuss some intriguing new findings in that area, focusing on recent findings regarding the nature of singlet-oxygen responses in the chloroplast.     

Soil pH influences embryonic survival in Pseudophryne bibronii (Anura: Myobatrachidae)

Abstract: There has been limited research examining the role that terrestrial habitat characteristics play in influencing persistence of amphibian populations. In this study we investigated the influence of a terrestrial habitat attribute on the distribution of the terrestrial egg‐laying toadlet, Pseudophryne bibronii. Eggs of this species are deposited in depressions, or under leaf litter, and develop to a stage where they can hatch to free swimming tadpoles when water covers breeding sites or embryos are washed into water. Because rainfall can be intermittent, eggs may sit for extended periods in terrestrial nests before sufficient rainfall initiates hatching. Appropriate egg‐laying sites must be chosen by both males and females to ensure embryos survive these periods. A study of 20 sites found that soil pH at sites where P. bibronii were recorded as present was significantly lower than pH at sites where P. bibronii were recorded as absent. To determine whether soil pH influenced the hatching success in P. bibronii, experiments were conducted in which batches of eggs were translocated to local areas with different soil pH. Survival rate of eggs was significantly influenced by relatively small changes in pH, with hatching success higher at lower pH. In a laboratory trial survival of eggs raised on sterilized soil was not affected by soil pH. Fungal infection of eggs was observed in the field and laboratory suggesting that hatching success might be affected via a complex interaction between soil pH, fungi and other soil biota. Choice trials using P. bibronii metamorphs indicated that individuals were capable of distinguishing between small differences in pH. Therefore, distribution of P. bibronii may be influenced by either differential mortality of embryos, or habitat choice by post metamorphic individuals, and further experiments are required to determine the relative importance of these factors.