Novel microsatellite loci identified from the Australian eastern small‐eyed snake (Elapidae: Rhinocephalus nigrescens) and cross species amplification in the related genus Suta

A total of 15 microsatellite primers pairs were developed for the Australian small‐eyed snake Rhinoplocephalus nigrescens. Five primers were used to screen 93 individuals of R. nigrescens and were also tested against eight species of the closely related genus Suta. Allelic diversity in R. nigrescens was high in three loci (12–27) and there was high heterozygosity (0.58–0.82). Observed heterozygosity did not deviate from Hardy–Weinberg expectations for the five loci tested. These primers will be useful in studies of population genetics and mating systems of small‐eyed snakes and related species.     

Wood density predicts plant damage and vegetative recovery rates caused by cyclone disturbance in tropical rainforest tree species of North Queensland,Australia

Abstract The ability to withstand disturbance (resistance) and the ability to recover biomass following disturbance (resilience) were investigated in Australian wet tropical rainforest tree species. These two attributes are expected to be negatively correlated, because investment of biomass in structural support (conferring resistance) results in trees exhibiting high wood densities and slow growth rates, and vice versa. We examined species’ responses to disturbance caused by a severe tropical cyclone to test this hypothesized trade‐off. We assessed cyclone damage in six species in three Mabi rainforest fragments on the Atherton Tablelands. Species differed in the proportion of individuals within four damage categories (minor damage, severe branch damage, snapped, uprooted). Resistance was positively related to wood density. We found a positive correlation between the proportion of trees experiencing minor damage only and wood density, supporting the hypothesized association between resistance and mechanical strength. Among the subset of trees in which stems snapped, rates of resprouting differed between species and were highest in low wood density species and lowest in species with highest wood density. Resilience, characterized as the ability to recover biomass following disturbance and estimated as growth rate standardized for stem diameter at breast height (g day^?1 · mm^?1), was negatively related to wood density. Thus, species with low wood densities were more likely to suffer stem and branch damage owing to cyclonic winds, but also demonstrated highest resprouting and fastest responses in terms of redeveloping biomass in the 8 months following disturbance. This suggests that a species’ position along the resistance–resilience spectrum can be predicted by mean wood density, which may allow managers to predict species’ responses to future cyclones. Our findings also provide mechanistic evidence for the ‘direct regeneration’ model of post‐cyclone succession, where response is characterized by resprouting and species composition is unchanged.     

Direct and indirect effects of exotic annual grasses on species composition of a South Australian grassland

Abstract Invasion by Mediterranean annual grasses, such as Avena L. spp. and Bronms L. spp, is one of the major threats to temperate perennial grassland. This study investigated the effects of annual grasses and their litter on the species composition of a grassland near Burra, South Australia. The placement of annual grass litter on soil samples in the glasshouse decreased the establishment or growth of several exotic annual dicots. In the field the addition of annual grass litter slightly decreased the frequency of Danthonia Lam. & DC. tussocks. Furthermore, litter strongly reduced the species richness from 13 species in plots with no litter to nine species in plots with the highest litter level, mainly by decreasing the frequency of common exotic dicots. Native dicot frequency similarly appeared to be decreased by litter addition. In addition to the negative effects of their litter, annual grasses also directly competed with perennial grasses. The magnitude of the competitive effect varied systematically along a slope, suggesting that other factors such as soil properties may control competitive inter actions. The biomass of annual grasses also tended to increase with the addition of their own litter. This combination of positive and negative feedback mechanisms suggests that brief periods favourable for annual grasses, either through management changes or environmental conditions, can lead to persistent changes in the species composition of the system.     

Blood Biochemistry of Sea Turtles Captured in Gillnets in the Lower Cape Fear River,North Carolina,USA

ABSTRACT Mortality due to fisheries interactions has been implicated as a contributor to population decline for several species of sea turtle. The incidental capture of sea turtles in the coastal gillnet fisheries of North Carolina, USA, has received much attention in recent years, and mitigation measures to reduce sea turtle mortality due to gillnet entanglement are a high priority for managers and conservationists. Efforts to evaluate effects of gillnet entanglement on sea turtle populations are complicated by the lack of information on health status of turtles released alive from nets and postrelease mortality. We obtained blood samples from green (Chelonia mydas) and Kemp's ridley (Lepidochelys kempii) sea turtles captured in gillnets for 20–240 minutes to assess the impacts of gillnet entanglement on blood biochemistry and physiological status. We measured concentrations of lactate, corticosterone, ions (Na⁺, K⁺, Cl^-, P, Ca²⁺), enzymes (lactate dehydrogenase [LDH], creatine phosphokinase [CPK], aspartate aminotransferase [AST]), protein, and glucose in the blood and also performed physical examinations of turtles to document external indicators of health status (injuries, lethargy, muted reflexes). We evaluated the effects of entanglement time on blood biochemistry and to look for correlations between blood biochemistry and results of the physical examinations. We observed a significant increase in blood lactate, LDH, CPK, phosphorus, and glucose with increased entanglement time. Alterations in blood biochemistry were generally associated with a decline in health status as indicated by results of the physical examination. Although entanglement time plays an important role in determining the health status of sea turtles upon release from a gillnet, our results suggest that factors such as the depth and severity of entanglement may also have an effect on health status of turtles and the probability of postrelease survival. We were unable to set a maximum unattended gillnet soak time to minimize impacts on captured sea turtles, and therefore recommend that fisheries managers continue to enforce the net attendance regulations currently in place in the lower Cape Fear River, North Carolina, during the summer months.     

White-Tailed Deer Foraging Habitat in Intensively Established Loblolly Pine Plantations

ABSTRACT Stand establishment techniques involving multiple herbicide applications are commonly used on industrial pine (Pinus spp.) plantations, raising concern over potential effects on white-tailed deer (Odocoileus virginianus) forage production. We tested effects of stand establishment intensity on deer forage in 1–5-year-old loblolly pine (Pinus taeda) plantations (n = 4) in the East Gulf Coastal Plain of Mississippi using forage biomass and 4 measures of nutritional carrying capacity that reflected crude protein or digestible energy requirements for body maintenance and lactation. We also assessed whether forage biomass combined with a deer use rating effectively indexed nutritional carrying capacity. Treatments were combinations of mechanical site preparation, chemical site preparation (CSP), and herbaceous weed control (HWC). Total forage biomass and forage biomass of grasses and forbs were reduced by broadcast HWC. Forage biomass of vines was reduced both by CSP and by multiple broadcast HWC applications. Maintenance-level carrying capacity estimates were reduced by broadcast HWC; lactation-level estimates were higher in moderate-intensity treatments. We believe the inherently low fertility of this region makes high-quality forage production a more important management priority than increasing forage quantity. Chemical or chemical and mechanical site preparation combined with banded HWC provided the best option for providing both forage quality and quantity in open-canopied, intensively managed pine plantations. Biomass-based indices may be suitable for indexing protein-based maintenance-level carrying capacity in this region, but our results indicated they were not useful for indexing other carrying capacity estimates.     

Origin and maintenance of sex: the evolutionary joys of self sex

Sex is generally thought of as meiosis, conjugation, and syngamy, with the primary function of sex believed to be genetic mixing. However, conjugation does not occur with complete automixis, whereas syngamy does not occur with restitutional automixis. Self sex in the forms of automixis and autogamy does not include genetic mixing. Yet sex, including self sex, is necessary for most eukaryotic lineages. What is the purpose of sex without genetic mixing? Obligate self sex is not an evolutionary dead end, but holds the key to understanding the evolutionary origin, function, maintenance, and ubiquity of sex. We extend the rejuvenescence hypothesis that sex provides a necessary developmental reset for multicellular eukaryotes and even many unicellular eukaryotes. Sex reduces additive genetic variance of epigenetic signals, especially cytosine methylation, and of ploidy levels. Furthermore, we argue that syngamy is a modified form of meiosis that maintains ploidy and resets epigenetic signals. Epigenetic resetting is consistent with sex being induced by starvation or desiccation. Diminution of additive genetic variance is consistent with the origin and maintenance of an adaptive trait, sex, that has been present for approximately two billion years. © 2009 The Linnean Society of London, Biological Journal of the Linnean Society, 2009, 98 , 707–728.     

Trophic level asynchrony in rates of phenological change for marine,freshwater and terrestrial environments

Recent changes in the seasonal timing (phenology) of familiar biological events have been one of the most conspicuous signs of climate change. However, the lack of a standardized approach to analysing change has hampered assessment of consistency in such changes among different taxa and trophic levels and across freshwater, terrestrial and marine environments. We present a standardized assessment of 25 532 rates of phenological change for 726 UK terrestrial, freshwater and marine taxa. The majority of spring and summer events have advanced, and more rapidly than previously documented. Such consistency is indicative of shared large scale drivers. Furthermore, average rates of change have accelerated in a way that is consistent with observed warming trends. Less coherent patterns in some groups of organisms point to the agency of more local scale processes and multiple drivers. For the first time we show a broad scale signal of differential phenological change among trophic levels; across environments advances in timing were slowest for secondary consumers, thus heightening the potential risk of temporal mismatch in key trophic interactions. If current patterns and rates of phenological change are indicative of future trends, future climate warming may exacerbate trophic mismatching, further disrupting the functioning, persistence and resilience of many ecosystems and having a major impact on ecosystem services.     

Male-limited evolution suggests no extant intralocus sexual conflict over the sexually dimorphic cuticular hydrocarbons of <Emphasis Type="Italic">Drosophila melanogaster</Emphasis>

Sexually dimorphic traits are likely to have evolved through sexually antagonistic selection. However, recent empirical data suggest that intralocus sexual conflict often persists, even when traits have diverged between males and females. This implies that evolved dimorphism is often incomplete in resolving intralocus conflict, providing a mechanism for the maintenance of genetic variance in fitness-related traits. We used experimental evolution in Drosophila melanogaster to directly test for ongoing conflict over a suite of sexually dimorphic cuticular hydrocarbons (CHCs) that are likely targets of sex-specific selection. Using a set of experimental populations in which the transmission of genetic material had been restricted to males for 82 generations, we show that CHCs did not evolve, providing experimental evidence for the absence of current intralocus sexual conflict over these traits. The absence of ongoing conflict could indicate that CHCs have never been the target of sexually antagonistic selection, although this would require the existing dimorphism to have evolved via completely sexlinked mutations or as a result of former, but now absent, pleiotropic effects of the underlying loci on another trait under sexually antagonistic selection. An alternative interpretation, and which we believe to be more likely, is that the extensive CHC sexual dimorphism is the result of past intralocus sexual conflict that has been fully resolved, implying that these traits have evolved genetic independence between the sexes and that genetic variation in them is therefore maintained by alternative mechanisms. This latter interpretation is consistent with the known roles of CHCs in sexual communication in this species and with previous studies suggesting the genetic independence of CHCs between males and females. Nevertheless, direct estimates of sexually antagonistic selection will be important to fully resolve these alternatives.     

Evidence that amylose synthesis occurs within the matrix of the starch granule in potato tubers

Transgenic potatoes expressing reduced levels of granule-bound starch synthase I (GBSSI) have been used to investigate whether the synthesis of amylose occurs at the surface of the starch granule or within the matrix formed by the synthesis and organization of amylopectin. Amylose in these potatoes is wholly or largely confined to a central region of the granule. Consequently this core region stains blue with iodine whereas the peripheral zone stains red. By making extensive measurements of the relative sizes of the granules and their blue-staining cores in tubers over a range of stages of development, we have established that the blue core increases in size as the granule grows. The extent of the increase in size of the blue core is greater in potatoes with higher levels of GBSSI. These data show that amylose synthesis occurs within the matrix of the granule, and are consistent with the idea that the space available in the matrix may be an important determinant of the amylose content of storage starches.