Characterization of the Calcium-Binding Contractile Protein Centrin from Tetraselmis striata (Pleurastrophyceae)

ABSTRACT. Centrin is a major protein of the contactile striated flagellar roots of the green alga Tetraselmis striata . We present a newly modified procedure for the preparation of centrin in sufficient quantity and purity to allow for detailed biochemical characterization. We establish that centrin purified by differential solubility, followed by phenyl-Sepharose and DEAE-Sephacel chromatography is identical with the protein extracted directly from striated flagellar roots with regard to molecular weight, isoelectric point, and calcium-dependent behavior in SDS-PAGE. We also compare the biochemical properties of purified centrin with calmodulin isolated from Tetraselmis and calmodulin isolated from mammalian brain. Centrin can be fully distinguished from either algal or mammalian calmodulin on the basis of molecular weight, isoelectric point, calcium-dependent behavior in SDS-PAGE, proteolytic peptide maps, amino acid composition, ability to activate bovine brain phosphodiesterase, and reactivity with specific antibodies.     

The Effect of Vitamin A on Cellular Differentiation and Mucous Glycoprotein Synthesis in Long-Term Rat Tracheal Organ Cultures

Rat tracheal explants maintained as organ cultures exhibited a normal mucociliary epithelium for at least 46 days in the presence of retinyl acetate. In the absence of vitamin A the explant epithelium became quiescent or underwent a metaplastic change to a keratinizing squamous epithelium. This process was accelerated if explants were derived from vitamin A-deficient animals. Autoradiographic examination showed that [³H]glucosamine label accumulated in various cell types in the explant, but especially in the epithelium. It was found that the explants secreted mucous glycoproteins into the medium and that the production and biochemical characteristics of a specific mucin fraction were dependent upon the vitamin A status of the explant.     

Modeling mate-finding behavior of the swarming polychaete,Nereis succinea,with TangoInSilico,a scientific orkflow-based simulation system for sexual searching

Summary

Pheromones can be used as attractants for the opposite sex in many environments; however, little is known about the search strategies employed in responding to pheromones in the marine environment. The spawning behavior of males of the polychaete Nereis succinea is known to be triggered at close range by a high concentration (>～10^?7 M) of pheromone, cysteine glutathione disulfide (CSSG), released by females. Since CSSG also causes acceleration of swimming and increased turning, in addition to eliciting ejaculation, we proposed the hypothesis that these behaviors elicited by low concentrations of pheromone can be used by males to find females. The current study develops a computer simulation model of male and female N. succinea behavior for testing whether male responses to low concentrations of CSSG can facilitate finding females. Video recording of female swimming behavior in the field showed spontaneous loops, spirals, and circles that have been incorporated into the model. The scientific workflow paradigm within which the computer model has been developed also incorporates a data provenance system to enable systematic replay and testing of responses to individual parameters. Output of the model shows complex turning behavior leading to successful mating encounters at concentrations as low as 3×10^?9 M CSSG. Behavior resembling the output of the model was recorded in field observations. Application of the model in the future will be used to determine what pheromone concentrations produce significant increases in the probability of mating encounters.     

Nereis succinea nuptial behavior: Does size matter?

Summary

Although Darwin noted that size may affect sexual selection, the effect of size on reproduction is controversial. Mature Nereis succinea, a polychaete that mates in pheromone-mediated twilight nuptial swarms, varies greatly in size, ranging more than 10-fold in body weight from 30 mg to >300 mg. Swim speed of swarming male worms increases with worm size, with the fastest males swimming more than twice the speed of the slowest. The female-produced spawning pheromone, nereithione, stimulates both swimming speed and spawning in males at concentrations of 10^?6 M and above, and lower concentrations cause significant activation of swimming. Individual worms can be stimulated to release sperm up to 40 or more times in a single experimental session. Larger worms release cumulatively more sperm than smaller ones, resulting in significant loss of body mass from repetitive spawning activated by nereithione. Size may enhance mating success of male N. succinea due to encountering more females as a result of faster swimming speed and due to the higher sperm density and number of spawning responses of large animals.     

Macroinvertebrate community structure,secondary production and trophic‐level dynamics in urban streams affected by non‐point‐source pollution

1. Despite non‐point‐source (NPS) pollution being perhaps the most ubiquitous stressor affecting urban streams, there is a lack of research assessing how urban NPS pollution affects stream ecosystems. We used a natural experimental design approach to assess how stream macroinvertebrate community structure, secondary production and trophic structure are influenced by urban NPS pollution in six streams. 2. Differences in macroinvertebrate community structure and secondary production among sites were highly correlated with stream‐water specific conductivity and dissolved inorganic phosphorus (DIP) concentrations. Macroinvertebrate richness, the Shannon diversity index and the Shannon evenness index were all negatively correlated with specific conductivity. These patterns were driven by differences in the richness and production of EPT and other intolerant taxa. Production of the five most productive taxa, tolerant taxa, non‐insect taxa and primary consumers were all positively correlated with stream‐water DIP. 3. Despite the positive correlation between primary consumer production and DIP, there was no correlation between macroinvertebrate predator production and either total or primary consumer macroinvertebrate production. This was observed because DIP was positively correlated with the production of non‐insect macroinvertebrate taxa assumed to be relatively unavailable for macroinvertebrate predator consumption. After removing production of these taxa, we observed a strong positive correlation between macroinvertebrate predator production and production of available prey. 4. Our results suggest that urban NPS pollution not only affects macroinvertebrate community structure, but also alters secondary production and trophic‐level dynamics. Differences in taxon production in our study indicate the potential for altered energy flow through stream food webs and potential effects on subsidies of aquatic insect prey to riparian food webs.     

High‐throughput species identification: from DNA isolation to bioinformatics

Ichthyoplankton collections provide a valuable means to study fish life histories. However, these collections are greatly underutilized, as larval fishes are frequently not identified to species due to their small size and limited morphological development. Currently, there is an effort underway to make species identification more readily available across a broad range of taxa through the sequencing of a standard gene. This effort requires the development of new methodologies to both rapidly produce and analyse large numbers of sequences. The methodology presented in this paper addresses these issues with a focus on the larvae of large pelagic fish species. All steps of the methodology are targeted towards high‐throughput identification using small amounts of tissue. To accomplish this, DNA isolation was automated on a liquid‐handling robot using magnetic bead technologies. Polymerase chain reaction and a unidirectional sequencing reaction followed standard protocols with all template cleanup and transferring also automated. Manual pipetting was thus reduced to a minimum. A character‐based bioinformatics program was developed to handle the large sequence output. This program incorporates base‐call quality scores in two types of sample to voucher sequence comparisons and provides suggested identifications and sequence information in an easily interpreted spreadsheet format. This technique when applied to tuna and billfish larvae collected in the Straits of Florida had an 89% success rate. A single species (Thunnus atlanticus) was found to dominate the catch of tuna larvae, while billfish larvae were more evenly divided between two species (Makaira nigricans and Istiophorus platypterus).