Characterization of microsatellite DNA markers for a mahseer species,Tor tambroides (Cyprinidae) and cross‐amplification in four congeners

This study reports the isolation and characterization of microsatellite DNA markers in a mahseer species, Tor tambroides (Pisces, Cyprinidae). Of a total of 14 loci evaluated, 10 were polymorphic in T. tambroides samples, with an average of 2.86 alleles per locus. Deviations from Hardy–Weinberg equilibrium were observed at one locus and there was no indication of linkage disequilibrium among loci. A high level of cross‐amplification among four congeners was achieved, with 12 loci successfully amplifying and 11 loci showing polymorphism in at least one other species. These markers will be a useful resource for population genetic studies and broodstock management of closely related mahseer species.     

Microfossils and evidence of land plant evolution

Resolving the question of (1) land plant and (2) vascular land plant evolution is a complex problem. It requires a continued, multidisciplinary effort. We are all grateful to Dianne Edwards and her colleagues (Edwards et al. 1979) for pursuing one such line of research with careful attention to morphology and stratigraphy. Their efforts, however, are confined to one small part of the globe, and they perforce involve only one type of evidence effective with regard to questions of vascular plant evolution once the land estate has been reached. They do not deal with the basic question of vascular and non-vascular land plant origins. The so-called Přídolí benchmark that remained the sine qua nun for vascular plant evolution when Dianne Edwards began her studies has now been irrevocably breached. What other supposedly sacrosanct benchmarks will also crumble as the result of future discoveries, now that vascular plants have been recovered from lower Ludlovian strata? Nevertheless, pre-Devonian plant megafossils are too rare to yield definitive results with regard to the origin of land plants prior to the vascular estate, even though they could in principle (as emphasized by Edwards et al. 1979) provide the least ambiguous evidence. We must look elsewhere than to megafossils for evidence suggesting links in time between green algal ancestors, major groups of living green land Plants, and the many extinct groups of enigmatic higher land plants in the crucial Early Paleozoic time interval.     

Extensive intraspecific genetic diversity of a freshwater crayfish in a biodiversity hotspot

1. The freshwater crayfish Cherax dispar (Decapoda: Parastacidae) inhabits coastal regions and islands of South East Queensland, Australia. We hypothesised that populations of C. dispar on different islands would be more genetically divergent from each other than populations from different drainages within the same island or on the mainland. 2. Phylogenetic and phylogeographic analyses were conducted on two mitochondrial genes (cytochrome oxidase subunit I & 16S ribosomal DNA) and one nuclear gene (Internal Transcribed Spacer region 2). Phylogeographic patterns were compared with those for other freshwater organisms in the area. 3. Deep genetic divergences were found within C. dispar, including four highly divergent (up to 20%) clades. The geographic distribution of each of the clades revealed strong latitudinal structuring along the coast rather than structuring among the islands. The high genetic divergence observed among the C. dispar clades was estimated to have pre‐dated island formation and may represent ancient river drainage patterns. 4. A restricted distribution was observed for the most divergent clade, which was discovered only on two of the sand islands (North Stradbroke Island and Moreton Island). Furthermore, strong phylogeographic structuring was observed within this clade on North Stradbroke Island, where no haplotypes were shared between samples from opposite sides of the island. This low connectivity within the island supports the idea that C. dispar rarely disperse terrestrially (i.e. across watersheds).     

Sandhill Crane Abundance and Nesting Ecology at Grays Lake,Idaho

Abstract: We examined population size and factors influencing nest survival of greater sandhill cranes (Grus canadensis tabida) at Grays Lake National Wildlife Refuge, Idaho, USA, during 1997–2000. Average local population of cranes from late April to early May, 1998–2000, was 735 cranes, 34% higher than that reported for May 1970–1971. We estimated 228 (SE = 30) nests in the basin core (excluding renests), 14% higher than a 1971 estimate. Apparent nest success in our study (x̄ = 60%, n = 519 nests) was lower than reported for Grays Lake 30–50 years earlier. Daily survival rates (DSRs) of all nests averaged 0.9707 (41.2%). The best model explaining nest survival included year and water depth and their interaction. Nest survival was highest (DSR = 0.9827) in 1998 compared with other years (0.9698-0.9707). Nest survival changed little relative to water depth in 1998, when flooding was extensive and alternative prey (microtines) irrupted, but declined markedly with lower water levels in 2000, the driest year studied. Hypotheses relating nest survival to vegetation height, land use (idle, summer grazing, fall grazing), and date were not supported. In a before-after-control-impact design using 12 experimental fields, nest survival differed among years but not among management treatments (idle, fall graze, fall burn, and summer—graze—idle rotation), nor was there an interaction between year and treatments. However, DSRs in fall-burn fields declined from 0.9781 in 1997–1998 to 0.9503 in 1999–2000 (posttreatment). Changes in the predator community have likely contributed to declines in nest success since the 1950s and 1970s. Our results did not support earlier concerns about effects of habitat management practices on crane productivity. Nest survival could best be enhanced by managing spring water levels. Managers should continue censuses during late April to evaluate long-term relationships to habitat conditions and management.     

Ten years of invasion: Harmonia axyridis (Pallas) (Coleoptera: Coccinellidae) in Britain

1. Harmonia axyridis was first recorded in Britain in 2004. Two subsequent earlier records were received from 2003. 2. The UK Ladybird Survey, a citizen science initiative involving online recording, was launched in 2005 to encourage people across Britain to track the spread of H. axyridis. Tens of thousands of people have provided records of H. axyridis and other species of ladybirds, creating an invaluable dataset for large‐scale and long‐term research. Declines in the distribution of seven (of eight assessed) native species of ladybird have been demonstrated, and correlated with the arrival of H. axyridis, using the records collated through the UK Ladybird Survey. 3. Experimental research and field surveys have also contributed to our understanding of the ecology of H. axyridis and particularly the process of invasion. Harmonia axyridis arrived in Britain through dispersal and introduction events from regions in which it was deliberately released as a biological control agent. The rapid spread of this species has been attributed to its high natural dispersal capability by means of both flight and anthropogenic transport. A number of factors have contributed to the successful establishment and indeed dominance of this polymorphic species within aphidophagous guilds, including high reproductive capacity, intra‐guild predation, eurytopic nature, high resistance to natural enemies within the invaded range, and potentially phenotypic plasticity. 4. The global invasion by H. axyridis and subsequent research on this species has contributed to the general understanding of biological invasions.     

Contamination on sandflats and the decoupling of linked ecological functions

Benthic macrofauna can influence inputs and transformations of energy and matter in estuaries, affecting both the stocks of vital materials (e.g. carbon, oxygen) and the rates of key processes (e.g. organic matter decomposition, nutrient uptake). Although a number of studies have identified shifts in functional groups or biological traits in relation to anthropogenic stressors, there have been few field‐based assessments of changes in functioning associated with stress gradients. We used a comparative experimental approach to investigate functioning on two sandflats with differing exposures to urban contaminants. Apart from significant differences in sediment contaminant concentrations (43.2 ± 1.8 mg kg^?1 Zn and 15.6 ± 0.9 mg kg^?1 Pb at the Pollen site; 17.7 ± 0.7 mg kg^?1 Zn and 7.9 ± 0.9 mg kg^?1 Pb at the Waiheke site), the two sandflats were readily comparable: both had similar sediment grain size distributions and were dominated by the same macrofaunal species; and both were in non‐eutrophic New Zealand marine reserves with low ambient sediment organic matter content. To better understand the effects of contaminants on biologically mediated transformations of organic matter into inorganic nutrients, we manipulated sediment organic matter content and macrofaunal abundance in standardized treatments at each site. Fluxes of oxygen and ammonium, which are linked to key sandflat processes such as organic matter decomposition and benthic photosynthesis, were measured as response variables 1 week after the experimental manipulations. We predicted more efficient organic matter processing on the uncontaminated flat and thus expected to see elevated ammonium efflux in response to organic enrichment treatments at this site. Higher rates of benthic photosynthesis were predicted for plots with higher ammonium efflux, as ammonium is a readily utilizable form of limiting inorganic nitrogen. We documented significant positive relationships between ammonium uptake and benthic primary production on the uncontaminated flat, but weaker/insignificant relationships at the contaminated site. Our data were consistent with theories of increased variability and a decoupling of system processes with increasing amounts of stress.     

A bioregional analysis of the distribution of rainforest cover,deforestation and degradation in Papua New Guinea

Papua New Guinea (PNG) is an extensively forested country. Recent research suggests that despite commencing a trajectory of deforestation and degradation later than many counties in the Asia–Pacific region, PNG is now undergoing comparable rates of forest change. Here we explore the bioregional distribution of changes in the forest estate over the period 1972–2002 and examine their implications for forest protection. This is undertaken through the development of a novel bioregional classification of the country based on biogeographic regions and climatic zones, and its application to existing forest cover and forest‐cover change data. We found that degradation and deforestation varied considerably across the 11 defined biogeographic regions. We report that the majority of deforestation and degradation has occurred within all the lowland forests, and that it is these forests that have the greatest potential for further losses in the near term. The largest percentage of total change occurred in the east of PNG, in the islands and lowlands of the Bismarck, D'Entrecasteaux, East Papuan Islands and in the South‐East Papua–Oro region. The only region with a significant highlands component to undergo deforestation at a comparable magnitude to the islands and lowland regions was the Huon Peninsula and Adelbert region. Significant changes have also occurred at higher elevations, especially at the interface of subalpine grasslands and upper montane forests. Lower montane forests have experienced proportionally less change, yet it is these forests that constitute the majority of forests enclosed within the protected area system. We find that protected areas are not convincingly protecting either representative areas of PNG's ecosystems, nor the forests within their borders. We conclude by suggesting a more expansive and integrated approach to managing the national forest estate.